BAC Information

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BAC

Clone NameB6Ng01-108G18
Chromosome7 (Build37)
Map Location 25,013,292 - 25,167,541
singlet/doubletdoublet
Overlap geneZfp109, Zfp108, Zfp93, LOC100043690, Zfp61, LOC100043691, Zfp94, 1700008P20Rik, Lypd5, Kcnn4
Upstream geneLOC667623, LOC100043088, EG628664, Nlrp4e, LOC434261, Nlrp5, LOC100043095, EG622032, LOC667651, LOC100043101, LOC100043103, EG546944, V1rd7, V1rd9, EG545934, V1rd22, LOC384573, EG622222, LOC546943, V1rd12, V1rd13, V1rd17, LOC100043121, V1rd16, LOC384575, V1rd20, V1rd18, V1rd15, EG622446, Zfp180, Zfp112, Zfp235, Zfp114, Zfp111
Downstream gene1500002O20Rik, Irgc1, Plaur, Cadm4, Zfp428, Irgq, 2310033E01Rik, Xrcc1, Zfp575, Ethe1, LOC100043138, EG232970, Lypd3, LOC100043706, Tex101, Gm1096, BC049730, EG210155, Cd177, Ceacam10, EG545936, LOC100043712, Lypd4, Dmrtc2, Rps19, Cd79a, Arhgef1, EG232974, Rabac1, Atp1a3, Grik5, Zfp574, Pou2f2, Dedd2, Zfp526, Gsk3a, 9130221H12Rik, Erf, Cic, Pafah1b3, EG623131, Tmem145, Megf8, Cnfn, Lipe
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108G18.bB6Ng01-108G18.g
ACCDH915612DH915613
length1,128381
definitionDH915612|Mus musculus domesticus DNA, BAC clone: B6Ng01-108G18, 5' end.DH915613|Mus musculus domesticus DNA, BAC clone: B6Ng01-108G18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,013,292 - 25,014,426)(25,167,155 - 25,167,541)
sequence
gaattccttcccacactcctcacacttgaacggcttctccccggtgtgag
ttctctggtggacttggagatgggccctctggctgaaggctttcccacag
ctgtcgcatttgtagggcttctctcccgtgtgcattctctggtgaatctg
aagatatgagctccggctaaagtctttcccacacacatcgcaatgaaatg
gtttctctcctgtatggacccgctggtgtccttggaagcttgaggctgaa
gtgaaacccttcccacactcttcacacttatatggcttctctcctgtgtg
aattagccgatggacttggagactggatctctggctgaaggctttcccac
acgcgtcacatttgtagagcttctcccccgtgtgcactctctggtgagtg
tgaagatgaaagctccgactgaagcatttcccacagacattgcagcaaaa
cggcttcactcccgtgtggacccgctggtggactttgacgtttgaggctg
aagtgaaacccttcccgcactcgtcacacttatatggcttctctcctgtg
tggacccgctgatggctgtaaaatctgaatctgaaacacttcccacacac
gtggcatttgtacggtttctccccagtgtggactcgctggtggatgtgca
ggtttgagctaaacctgaagcgtctgccacagtctccacacttatatggc
ttctctcctgtgtgaattctctggtgggcatggaggactgaccactgtgt
gaaggccttcccacagctgtcgcacctgtagggcttctcccctgtgtgca
ctctccggtgagtctgaagtgctgagctctgactgaaggccttgccacac
tcgtgacaccagtagcgctttgttcctgcatgaacactcttttgaatgga
gctatgtctggagacttcgtatgtactacgtacagggacttttttcctac
aaggtcctgctgatggagttctagagtagtctgtcaatgaaggctcttgg
gccttgctgcatttgtagactttctttctggtgtaaacatgatgcggggt
tacagttgacccaggaaagtagtttatcaaagtcactgtgcttctgcctt
tgctcctttattgcatgtattgttatct
acttgttcccggagcttccggtgtttcagccgtacctggcggaacctgtg
gggaggtgaactcagttctaggcttggtccctgggtaagtcagagggtag
gggtgaggggaggagagccaggacaggaaggagcagtctgcctcagagta
agagggaccctgggaatccagggccactagcattgagtcacagtcagaat
cgggcggatcacacagggacccagggaggccctcacgtgtggatggcggc
cagcatcttgcgctgatgtctgcgggcagcccgggagtccttccttctag
tgtgcttgtagggcatccaggcttcctgcaacagccgcgcctctgactcc
ttcatctgacgggaagacacagtgtcagggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_25013292_25014426
seq2: B6Ng01-108G18.b_49_1176

seq1  GAATTCCTTCCCACACTCCTCACACTTGAACGGCTTCTCCCCGGTGTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCCCACACTCCTCACACTTGAACGGCTTCTCCCCGGTGTGAG  50

seq1  TTCTCTGGTGGACTTGGAGATGGGCCCTCTGGCTGAAGGCTTTCCCACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGGTGGACTTGGAGATGGGCCCTCTGGCTGAAGGCTTTCCCACAG  100

seq1  CTGTCGCATTTGTAGGGCTTCTCTCCCGTGTGCATTCTCTGGTGAATCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCGCATTTGTAGGGCTTCTCTCCCGTGTGCATTCTCTGGTGAATCTG  150

seq1  AAGATATGAGCTCCGGCTAAAGTCTTTCCCACACACATCGCAATGAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATGAGCTCCGGCTAAAGTCTTTCCCACACACATCGCAATGAAATG  200

seq1  GTTTCTCTCCTGTATGGACCCGCTGGTGTCCTTGGAAGCTTGAGGCTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTCCTGTATGGACCCGCTGGTGTCCTTGGAAGCTTGAGGCTGAA  250

seq1  GTGAAACCCTTCCCACACTCTTCACACTTATATGGCTTCTCTCCTGTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAACCCTTCCCACACTCTTCACACTTATATGGCTTCTCTCCTGTGTG  300

seq1  AATTAGCCGATGGACTTGGAGACTGGATCTCTGGCTGAAGGCTTTCCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGCCGATGGACTTGGAGACTGGATCTCTGGCTGAAGGCTTTCCCAC  350

seq1  ACGCGTCACATTTGTAGAGCTTCTCCCCCGTGTGCACTCTCTGGTGAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCGTCACATTTGTAGAGCTTCTCCCCCGTGTGCACTCTCTGGTGAGTG  400

seq1  TGAAGATGAAAGCTCCGACTGAAGCATTTCCCACAGACATTGCAGCAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATGAAAGCTCCGACTGAAGCATTTCCCACAGACATTGCAGCAAAA  450

seq1  CGGCTTCACTCCCGTGTGGACCCGCTGGTGGACTTTGACGTTTGAGGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTTCACTCCCGTGTGGACCCGCTGGTGGACTTTGACGTTTGAGGCTG  500

seq1  AAGTGAAACCCTTCCCGCACTCGTCACACTTATATGGCTTCTCTCCTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAAACCCTTCCCGCACTCGTCACACTTATATGGCTTCTCTCCTGTG  550

seq1  TGGACCCGCTGATGGCTGTAAAATCTGAATCTGAAACACTTCCCACACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCCGCTGATGGCTGTAAAATCTGAATCTGAAACACTTCCCACACAC  600

seq1  GTGGCATTTGTACGGTTTCTCCCCAGTGTGGACTCGCTGGTGGATGTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCATTTGTACGGTTTCTCCCCAGTGTGGACTCGCTGGTGGATGTGCA  650

seq1  GGTTTGAGCTAAACCTGAAGCGTCTGCCACAGTCTCCACACTTATATGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGAGCTAAACCTGAAGCGTCTGCCACAGTCTCCACACTTATATGGC  700

seq1  TTCTCTCCTGTGTGAATTCTCTGGTGGGCATGGAGGACTGACCACTGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCCTGTGTGAATTCTCTGGTGGGCATGGAGGACTGACCACTGTGT  750

seq1  GAAGGCCTTCCCACAGCTGTCGCACCTGTAGGGCTTCTCCCCTGTGTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCCTTCCCACAGCTGTCGCACCTGTAGGGCTTCTCCCCTGTGTGCA  800

seq1  CTCTCCGGTGAGTCTGAAGTGCTGAGCTCTGACTGAAGGCCTTGCCACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCGGTGAGTCTGAAGTGCTGAGCTCTGACTGAAGGCCTTGCCACAC  850

seq1  TCGTGACACCAGTAGCGCTTTGTTCCTGCATGAACACTCTTTTGAATGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGACACCAGTAGCGCTTTGTTCCTGCATGAACACTCTTTTGAATGGA  900

seq1  GCTATGTCTGGAGACTTCGTATGTACTACGTACAGGGGACTTTTTTCCTA  950
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GCTATGTCTGGAGACTTCGTATGTACTACGTACA-GGGACTTTTTTCCTA  949

seq1  CAAGGTCCTGCTGATGGAGTTCTAGAGTAGGTCTGTCAATGAAGGCCTCT  1000
      ||||||||||||||||||||||||||||| ||||||||||||||| ||||
seq2  CAAGGTCCTGCTGATGGAGTTCTAGAGTA-GTCTGTCAATGAAGG-CTCT  997

seq1  TGGGCCTTGCTGCATTTGTAGGACTTTCTTTCT-GTGTAAACATGATGCG  1049
      |||||||||||||||||||| |||||||||||| ||||||||||||||||
seq2  TGGGCCTTGCTGCATTTGTA-GACTTTCTTTCTGGTGTAAACATGATGCG  1046

seq1  GGGTGACAGGTGACACAGGAAAGGTAAGTTTATCAAAGTCACTGTTGCTC  1099
      |||| |||| |||| ||||||||   |||||||||||||||||| |||| 
seq2  GGGTTACAGTTGACCCAGGAAAG--TAGTTTATCAAAGTCACTG-TGCTT  1093

seq1  TGGCCTTTGTCTCCTTTA-TGCAGTGTATTGTTATCT  1135
        ||||||| |||||||| |||| |||||||||||||
seq2  CTGCCTTTG-CTCCTTTATTGCA-TGTATTGTTATCT  1128

seq1: chr7_25167155_25167541
seq2: B6Ng01-108G18.g_67_453 (reverse)

seq1  CCCCTGACACTGTGTCTTCCCGTCAGATGAAGGAGTCAGCGGCGCGGCTG  50
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CCCCTGACACTGTGTCTTCCCGTCAGATGAAGGAGTCAGAGGCGCGGCTG  50

seq1  CTGCAGGAAGCCTGGATGTACTACAAGCACACTCGAAGGAAGGACTCCCG  100
       |||||||||||||||||  ||||||||||||| ||||||||||||||||
seq2  TTGCAGGAAGCCTGGATGCCCTACAAGCACACTAGAAGGAAGGACTCCCG  100

seq1  GGCTGCCCGCAGACATCAGCGCAAGATGCTGGCCGCCATCCACACGTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCCCGCAGACATCAGCGCAAGATGCTGGCCGCCATCCACACGTGAG  150

seq1  GGCCTCCCTGGGTCCCTGTGTGATCCGCCCGATTCTGACTGTGACTCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCCCTGGGTCCCTGTGTGATCCGCCCGATTCTGACTGTGACTCAAT  200

seq1  GCTAGTGGCCCTGGATTCCCAGGGTCCCTCTTACTCTGAGGCAGACTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTGGCCCTGGATTCCCAGGGTCCCTCTTACTCTGAGGCAGACTGCT  250

seq1  CCTTCCTGTCCTGGCTCTCCTCCCCTCACCCCTACCCTCTGACTTACCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTGTCCTGGCTCTCCTCCCCTCACCCCTACCCTCTGACTTACCCA  300

seq1  GGGACCAAGCCTAGAACTGAGTTCACCTCCCCACAGGTTCCGCCAGGTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCAAGCCTAGAACTGAGTTCACCTCCCCACAGGTTCCGCCAGGTAC  350

seq1  GGCTGAAACACCGGAAGCTCCGGGAACAAGTGAATTC  387
      |||||||||||||||||||||||||||||||||||||
seq2  GGCTGAAACACCGGAAGCTCCGGGAACAAGTGAATTC  387