BAC Information

Click to search

BAC

Clone NameB6Ng01-108H18
Chromosome7 (Build37)
Map Location 47,540,851 - 47,541,508
singlet/doubletsinglet
Overlap genenone
Upstream geneEG628058, EG668618, EG330513, EG434168, 9430025M13Rik, LOC100038985, 3000002G13Rik, EG215208, LOC100039133, LOC100039050, EG668540, 4930558N11Rik, EG628161
Downstream geneLOC100039094, 2900093B09Rik, 4930433I11Rik, EG233164, LOC668555, EG627987, LOC100039269, LOC545955, EG628304, LOC668561, EG434172
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108H18.bB6Ng01-108H18.g
ACCDH915658DH915659
length1,1491,176
definitionDH915658|Mus musculus domesticus DNA, BAC clone: B6Ng01-108H18, 5' end.DH915659|Mus musculus domesticus DNA, BAC clone: B6Ng01-108H18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagaagctggactccagaaattcaaataaccccattaaaaatgg
ggttcagagctaagcaaagaattctcaactgaggaataccaaatggctga
gaagcacctgaaaaaatgttcaacatccttaatcatcagggaaatgcaaa
tcaaaacaaccctgagattccacctcacaccagtcagaatggctaagatc
aaaaattcaggtgacagtagatgctggcgatgatgtggagaaagaggaac
actcctccactgctggtgggattgcaagcttgtagaaccactctggaagt
cagtctggaggttcctcagaaaattggacataatactactggaagatcca
tcaatacctctcctgggcacatacccagaagaagttccaactggtaataa
gaacacctgctccactatgttcatagcagccttatttataatagccagaa
gctggaaagaacccagatgcacttcattttttaaagttggattatttggt
ttgttgatgtctagtttcatgagttctttatgtatcctgggtatcagcct
tctgtcagatgtggtattggtgaagatacttccctgttctgtgagctgct
attatttattctattgacagcatcctttgccttagagaagctttcagttt
catgaggtctcatttattaattgatgatcttagtgcctgtgccattggtg
ttcctttaggaagttgtctcctgtgccaatgcattcaaggctattcttcc
actttctattctataaagtttagtgtatctggttttatgttaaggtcttt
gatccacgtagacttgagctttgtgcagggtgatacatgtagatctattt
gtgttcttctacatgccaacatccaattagaccaacaccatttgttgaag
acgcattccttttttcattgtacaattttggctttttatacaaatcaagt
gttcatagtgtgtgaattacttctgcatctttgatttgactccaaagttt
ttatactttgatttattcatctggtatatggtaaggtacaggtcctttaa
attagcttcataacacttcctgcttcccccacccaagttgtattgaaata
ttaattactggaaccatgatagttgctccttttaaatatagaatccatt
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatccaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattacattgatggattttcgtatattaaacc
atccctgcattcctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcaagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtactttctacttctatcttgtgaaaaagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactatttataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggcacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtaaaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcagttctgattttgttaat
taggattttgtctctgtgccctctagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
ataggtcttcttgtttccacttgggttgatttcacccctgagtttgatta
tttcctgccgtctactcctcttgggtgaatttgctttctttttttctaga
gcttttagatgtgttgtcaagctgctagtatgtgctctctcccatttctt
catggaggcactcagagctatgagtttccctctagaaatgctttcatgtg
tcccaaaggttgggtacgttgtggcttcatttccttaactctgaaagtct
taatttcttttctttattcttccttgaccaagtatcattgaaagaaaggg
tggttcagttccacggaagtgtggcctttctgtcatttttgtattgagaa
tacacccatgcagggcgactgaaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_47540851_47541508
seq2: B6Ng01-108H18.b_543_1192

seq1  TTTGTTGATGTCTAGTTTCATGAGTTCTTTATGTATCCTGGGTATCAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGATGTCTAGTTTCATGAGTTCTTTATGTATCCTGGGTATCAGCC  50

seq1  TTCTGTCAGATGTGGTATTGGTGAAGATACTTCCCTGTTCTGTGAGCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCAGATGTGGTATTGGTGAAGATACTTCCCTGTTCTGTGAGCTGC  100

seq1  TATTATTTATTCTATTGACAGCATCCTTTGCCTTAGAGAAGCTTTCAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTTATTCTATTGACAGCATCCTTTGCCTTAGAGAAGCTTTCAGTT  150

seq1  TCATGAGGTCTCATTTATTAATTGATGATCTTAGTGCCTGTGCCATTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAGGTCTCATTTATTAATTGATGATCTTAGTGCCTGTGCCATTGGT  200

seq1  GTTCCTTTAGGAAGTTGTCTCCTGTGCCAATGCATTCAAGGCTATTCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTTTAGGAAGTTGTCTCCTGTGCCAATGCATTCAAGGCTATTCTTC  250

seq1  CACTTTCTATTCTATAAAGTTTAGTGTATCTGGTTTTATGTTAAGGTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTCTATTCTATAAAGTTTAGTGTATCTGGTTTTATGTTAAGGTCTT  300

seq1  TGATCCACGTAGACTTGAGCTTTGTGCAGGGTGATACATGTAGATCTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCACGTAGACTTGAGCTTTGTGCAGGGTGATACATGTAGATCTATT  350

seq1  TGTGTTCTTCTACATGCCAACATCCAATTAGACCAACACCATTTGTTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCTTCTACATGCCAACATCCAATTAGACCAACACCATTTGTTGAA  400

seq1  GACGCATTCCTTTTTTCATTGTACAATTTTGGCTTTTTATACAAAATCAA  450
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GACGCATTCCTTTTTTCATTGTACAATTTTGGCTTTTTATAC-AAATCAA  449

seq1  GTGTTCATAGGTGTGTGAATTTACTTCTGCATCTTTGATTTGACTCCAAA  500
      ||||||||| ||||||||| ||||||||||||||||||||||||||||||
seq2  GTGTTCATA-GTGTGTGAA-TTACTTCTGCATCTTTGATTTGACTCCAAA  497

seq1  GTTTTTATACTTTGATTTATTCATCTGGTATTATGTTAGGTACAGGTTCT  550
      |||||||||||||||||||||||||||||||   || |||||||||| ||
seq2  GTTTTTATACTTTGATTTATTCATCTGGTATATGGTAAGGTACAGGTCCT  547

seq1  TTAAATTAGCTTCATAACAACTCCCTGCTTCCCCCACCCCATGTGTATTG  600
      |||||||||||||||||| ||| |||||||||||||||| |  |||||||
seq2  TTAAATTAGCTTCATAAC-ACTTCCTGCTTCCCCCACCCAAGTTGTATTG  596

seq1  AAATATTGTATTACTGGACACATGATAG-TGCTGCCTTTTAAAATTATGA  649
      |||||||  |||||||||  |||||||| |||| |||||||||  ||| |
seq2  AAATATT-AATTACTGGAACCATGATAGTTGCT-CCTTTTAAA--TAT-A  641

seq1  AAATCCATT  658
       ||||||||
seq2  GAATCCATT  650