BAC Information

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BAC

Clone NameB6Ng01-108L02
Chromosome7 (Build37)1 (Build37)
Map Location 15,181,007 - 15,181,603148,878,562 - 148,879,569
singlet/doubletsingletsinglet
Overlap geneB430211C08Rik
Upstream geneEG666256, LOC666267, LOC100042624, LOC100043194, Sult2a1, EG620627, EG434121, EG629203, LOC677512, EG629219, EG434123, 2810007J24Rik, EG638251
Downstream geneEG194588, LOC666352, EG666312, LOC666365, LOC671978, LOC100042677, LOC100042685, EG666381, LOC100042691, LOC100042702, LOC100042707, LOC100042711, LOC100042714, LOC100042717, LOC100042721, LOC100042728, LOC100042731, LOC100042735, LOC100042739, LOC100042742, LOC235841, EG666407, LOC666337, Obox2, LOC100042753, LOC100042756, LOC100042758, EG545921, LOC100042762, Obox1, LOC100042765
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108L02.bB6Ng01-108L02.g
ACCDH915812DH915813
length1,100998
definitionDH915812|Mus musculus domesticus DNA, BAC clone: B6Ng01-108L02, 5' end.DH915813|Mus musculus domesticus DNA, BAC clone: B6Ng01-108L02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(15,181,007 - 15,181,603)(148,878,562 - 148,879,569)
sequence
gaattctgacatagctaaagccttccgccagtgttctaacagtcctagaa
cgtccttgagcaagaccatgggcttgaaattctgtaagaatgttgctaat
cagaatagcctctggtactacactatcactttgaataaaagctaagtcgc
tcccatatacaggaatttacaatggtttatgaagtagatcgggctgtggt
tttagagtattacattattcttgagatggttagctagaacggaactccct
cgttagaaccatggcttggatgtgaaagcccttgccccaggagagtaaag
acctcacacatggcttctaagactatagctgagttacacccatacacacg
tatttacaatggcctaaggggaaggtagactatataatagactaaaatag
gaactatggcaagggcacgaagcccttgaccctggcttctaagattaagc
gaatcttaggtggagtccttttggatcccagttgttaacaatgaattcta
tcccaggtggttcccgttagaccttctgtgtttgcattcctctgttttat
gtaagattccagttacctcatttgtaccttgcaaatatgtcacccaactt
ccttattgtcttctgcataaaaagtctgatgcttgatttgaaaaacacat
tcagattcaacacaacctttcctgtgtgcatctgtctgtcaaattcatcc
tatgcttttgcccacctgagactagagacccattccatgcagacaaaggg
gcccagagggtctgcggcagttggtgcccaaacagggacaccagagcagg
ttagtctttctttctttcttttttctttctcttctttcttttctcaggca
aagacaggatctcgtcgtgactgtgctgcagaaggactgattcgtagatc
agttaagagaggagtaagttttattcatggagcagtcataatcgaacggg
aagaggttgtttctgttcagtctttcagccacatgttatctggaagaagg
cctaaaggtctcagaataatctttacagaattttatgatttcgtgcaaga
atcagtcctggtttccagagggagggagcttggacatagaagatgggaag

gaattctatgagtagtggaagaaatccatctactagaacttaggaacaag
agcttatgaagctaggtgaatttattccagaaaaaaatagaaagatcctt
tatccatcaatccttacaaggacctatgcatgtgacaatgtaatgcaaat
gtatgactctgggacaggatcccaatcacagagccactcagactcataag
cattatcctccaaacatatgttccacctccttccagtttggaaattatct
ataagagctgactacacagagagatagtagttttctcttagccatggaga
tgtgtttatttgagttgaccaaacactggtttttttttttttgtttttgt
tttttgttttttttcaagacagggtttctctgtgtagccctggctgtcct
ggaactcactctgtagaccaggctggcctcgaactcagaaatccacctgc
ctctgcctcccaagtgctgggattaaaggtgtgtgccaccactgtctgat
cctttgtatttcttttctgaaggatgtatttactttgagttttatcaaag
cagttcctattaggaaagtcgtcaatttccaagttggctgtatcgtggct
aagtcacagttcgagcagccatgtattcttgttctgatattctcatgttc
tataaagaaggagcaccattgataaaatagcaccatgtcctgctaactgt
tcatccctctctccccagtgttaaagcactgagttctttggacatgtaca
ttatttgtttgttttcttgaaattggattttttatgcaatatgttctgaa
tataatttctcctccctcaactactgtcagatcttccacacaccaacgca
aatatatacactttcttgcttttattaaaacaaaaagtcataggcaaggg
aagcaaacgaacaccaactatggatgcagtcctcctgccttctgctccac
ctcgggaactcacagcgagcttgaaagcaactaaaccagaaactggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_15181007_15181603
seq2: B6Ng01-108L02.b_542_1141

seq1  TCCCAGGTGGTTTCCGGTAGACCTTTTGTGTTTACATTCCTCTGTTTTAT  50
      |||||||||||| ||| |||||||| ||||||| ||||||||||||||||
seq2  TCCCAGGTGGTTCCCGTTAGACCTTCTGTGTTTGCATTCCTCTGTTTTAT  50

seq1  GTAAGATTCCGGTTACCTCATTTGTACCTTGAGAATATGTCACCCAACTT  100
      |||||||||| ||||||||||||||||||||  |||||||||||||||||
seq2  GTAAGATTCCAGTTACCTCATTTGTACCTTGCAAATATGTCACCCAACTT  100

seq1  CCTTATTGTCTTCTGCATAAAAAGTCTGATGCTTGATTTGAAAAATACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CCTTATTGTCTTCTGCATAAAAAGTCTGATGCTTGATTTGAAAAACACAT  150

seq1  TCAGATTCCACACGGCCTCTCCTGTGTGCATCTGTCTGTC-AATTCATCC  199
      |||||||| ||||  ||| ||||||||||||||||||||| |||||||||
seq2  TCAGATTCAACACAACCTTTCCTGTGTGCATCTGTCTGTCAAATTCATCC  200

seq1  TATGC-TTTGTCCACCCGCAACTAGAGACCCGTTCCATGCAGACAAAGGG  248
      ||||| |||| ||||| |  ||||||||||| ||||||||||||||||||
seq2  TATGCTTTTGCCCACCTGAGACTAGAGACCCATTCCATGCAGACAAAGGG  250

seq1  GCCCAGAGAGTCTGCGGCAGTTGGCGCCTGAACAGGGACACCAGAGCAGG  298
      |||||||| ||||||||||||||| |||  ||||||||||||||||||||
seq2  GCCCAGAGGGTCTGCGGCAGTTGGTGCCCAAACAGGGACACCAGAGCAGG  300

seq1  TTAGTCTTTCTTTCTTTCTTTTTTCTTTCTCTTCTTTATTTTCTCAGGCA  348
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTAGTCTTTCTTTCTTTCTTTTTTCTTTCTCTTCTTTCTTTTCTCAGGCA  350

seq1  AAGACAGTATCTCGTCGTGACCGTGCTACAGACGGGCTAATTCGTAGATC  398
      ||||||| ||||||||||||| ||||| |||| || || |||||||||||
seq2  AAGACAGGATCTCGTCGTGACTGTGCTGCAGAAGGACTGATTCGTAGATC  400

seq1  AGTTAAGAGACGAGTAAGTTTTA-TCATGGGGCAGTCAGAATCGAAAGGG  447
      |||||||||| |||||||||||| |||||| ||||||| ||||||| |||
seq2  AGTTAAGAGAGGAGTAAGTTTTATTCATGGAGCAGTCATAATCGAACGGG  450

seq1  AAGAAGTTGTTTCTG-TCGGTC-TTCAAGCACATGTTGTCTGGAAG-AGG  494
      |||| |||||||||| || ||| ||||  |||||||| |||||||| |||
seq2  AAGAGGTTGTTTCTGTTCAGTCTTTCAGCCACATGTTATCTGGAAGAAGG  500

seq1  CCTAAAGGTCTCGGATAGATCTTTACAAGAATTTTATGATTTCGTGCAAA  544
      |||||||||||| ||   |||||||| |||||||||||||||||||| ||
seq2  CCTAAAGGTCTCAGAATAATCTTTAC-AGAATTTTATGATTTCGTGC-AA  548

seq1  AAATCAGTCCCTGGTTTCCAGAGGAGGGAAGCTT-AACATTAGAAGATTG  593
       ||||||| |||||||||||||||  || |||||  ||| |||||||| |
seq2  GAATCAGT-CCTGGTTTCCAGAGGGAGGGAGCTTGGACA-TAGAAGATGG  596

seq1  GAAG  597
      ||||
seq2  GAAG  600

seq1: chr1_148878562_148879569
seq2: B6Ng01-108L02.g_65_1062

seq1  GAATTCTATGAGTAGTGGAAGAAATCCATCTACTAGAACTTAGGAACAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGAGTAGTGGAAGAAATCCATCTACTAGAACTTAGGAACAAG  50

seq1  AGCTTATGAAGCTAGGTGAATTTATTCCAGAAAAAAATAGAAAGATCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTATGAAGCTAGGTGAATTTATTCCAGAAAAAAATAGAAAGATCCTT  100

seq1  TATCCATCAATCCTTACAAGGACCTATGCATGTGACAATGTAATGCAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCATCAATCCTTACAAGGACCTATGCATGTGACAATGTAATGCAAAT  150

seq1  GTATGACTCTGGGACAGGATCCCAATCACAGAGCCACTCAGACTCATAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGACTCTGGGACAGGATCCCAATCACAGAGCCACTCAGACTCATAAG  200

seq1  CATTATCCTCCAAACATATGTTCCACCTCCTTCCAGTTTGGAAATTATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATCCTCCAAACATATGTTCCACCTCCTTCCAGTTTGGAAATTATCT  250

seq1  ATAAGAGCTGACTACACAGAGAGATAGTAGTTTTCTCTTAGCCATGGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAGCTGACTACACAGAGAGATAGTAGTTTTCTCTTAGCCATGGAGA  300

seq1  TGTGTTTATTTGAGTTGACCAAACACTGGTTTTTTTTTTTTTGTTTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTATTTGAGTTGACCAAACACTGGTTTTTTTTTTTTTGTTTTTGT  350

seq1  TTTTTGTTTTTTTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTTTTTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCT  400

seq1  GGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGC  450

seq1  CTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGTGCCACCACTGTCTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGTGCCACCACTGTCTGAT  500

seq1  CCTTTGTATTTCTTTTCTGAAGGATGTATTTACTTTGAGTTTTATCAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGTATTTCTTTTCTGAAGGATGTATTTACTTTGAGTTTTATCAAAG  550

seq1  CAGTTCCTATTAGGAAAGTCGTCAATTTCCAAGTTGGCTGTATCGTGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCTATTAGGAAAGTCGTCAATTTCCAAGTTGGCTGTATCGTGGCT  600

seq1  AAGTCACAGTTCGAGCAGCCATGTATTCTTGTTCTGATATTCTCATGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACAGTTCGAGCAGCCATGTATTCTTGTTCTGATATTCTCATGTTC  650

seq1  TATAAAGAAGGAGCACCATTGATAAAATAGCACCATGTCCTGCTAACTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGAAGGAGCACCATTGATAAAATAGCACCATGTCCTGCTAACTGT  700

seq1  TCATCCCTCTCTCCCCAGTGTTAAAGCACTGAGTTCTTTGGACATGTACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCCTCTCTCCCCAGTGTTAAAGCACTGAGTTCTTTGGACATGTACA  750

seq1  TTATTTGTTTGTTTTCTTGAAATTGGATTTTTTATGCAATATGTTCTGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGTTTGTTTTCTTGAAATTGGATTTTTTATGCAATATGTTCTGAA  800

seq1  TATAATTTCTCCTCCCTCAACTACTGTCAGATCTTCCCACACCACCAACG  850
      ||||||||||||||||||||||||||||||||||| ||||| ||||||||
seq2  TATAATTTCTCCTCCCTCAACTACTGTCAGATCTT-CCACA-CACCAACG  848

seq1  CAAATATATACACTTTCTTGCTTTTATTAAAAAACAAAAAGTCATAGGCA  900
      ||||||||||||||||||||||||||||  ||||||||||||||||||||
seq2  CAAATATATACACTTTCTTGCTTTTATT--AAAACAAAAAGTCATAGGCA  896

seq1  AGGGAAGCAAACGAACACCAACTATGGATGCAGTCCTCCTGCTCTCTGCT  950
      ||||||||||||||||||||||||||||||||||||||||||  ||||| 
seq2  AGGGAAGCAAACGAACACCAACTATGGATGCAGTCCTCCTGCCTTCTGC-  945

seq1  TCCACCTCTGGAAACTCCACAGCCGAGCTTGAAAAGCAACTAAACCAGAG  1000
      |||||||| || |||| ||||| |||||||| ||||||||||||||||| 
seq2  TCCACCTC-GGGAACT-CACAG-CGAGCTTG-AAAGCAACTAAACCAGA-  990

seq1  AACTGGAA  1008
      ||||||||
seq2  AACTGGAA  998