BAC Information

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BAC

Clone NameB6Ng01-108L08
Chromosome7 (Build37)
Map Location 32,271,538 - 32,437,196
singlet/doubletdoublet
Overlap geneLOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337
Upstream geneNphs1, Prodh2, Gm1082, Snx26, BC053749, Hspb6, 1810054G18Rik, Psenen, U2af1l4, Tmem149, Wbp7, Zbtb32, Upk1a, Cox6b1, Etv2, 3100004P22Rik, 2310022K01Rik, 4930479M11Rik, 2200002J24Rik, EG233075, Atp4a, Tmem147, Gapdhs, Sbsn, Dmkn, Krtdap, Ffar2, Ffar3, Ffar1, Cd22, Mag, Hamp2, Usf2-ps1, Hamp1, Usf2, LOC100043823, Lsr, Tmem162, Fxyd5, Fxyd7, Fxyd1, Lgi4, Fxyd3, Hpn, Scn1b, Gramd1a, LOC672598, LOC100043323, LOC100043827, Apbh, Abpe, LOC100043326, EG384585, LOC100043328, LOC100043331, LOC626181
Downstream geneLOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108L08.bB6Ng01-108L08.g
ACCDH915824DH915825
length1,1471,075
definitionDH915824|Mus musculus domesticus DNA, BAC clone: B6Ng01-108L08, 5' end.DH915825|Mus musculus domesticus DNA, BAC clone: B6Ng01-108L08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,271,538 - 32,272,707)(32,436,179 - 32,437,196)
sequence
gaattccagaggatctatagatgttacttctgggaggtgatctcccgtca
gtcaaaagaaccaagactaggtaatgtatttgggaaagaagttaatttgc
ttcatgatctgaaatgttgaaggtcaaggatagggcaagctcaggtagtc
agggacttgtgatgtctgatcccagggtacacagcagaagaataaccgga
tattgtggaagacagagagcagaggctccactctgcttctcaagcaccca
tgatatgctcactgaccaggcctgccacagtggggaacaatactcaacgt
ggctattggtgtgtgcctcatacatgttaatgcataggtggcccttcctt
cggacatgttggtttttgatgcagattgagtatttaggagacaaattacc
caggcaggtggagaaaatgtgttataggtaatgagggcagaccatatgaa
ggccctgccttttgcttgtgtcacacttacagagaaagggtgtcatacct
agtataaagtctctgcaaatgacaaacacagtgttgaaatggtaaattgc
aggtacaggtttacacagagcaatcagatgaccagcaaagttgaaagaaa
tgatgtgaaagtacatggtactttccacctgtgatccccatttgtgggaa
gctgaggtaggtgtgccccagttacctgtctcgatctccttaatcacaaa
gataaaaattgtgctcaggtagggggttgttctaccaagttggcttccac
ctcttccttgccctccatgtttggcaacagtgagcagaagttggctctaa
atgaaatatattttagctaccctctataaaagacacaaagccttggtaca
ttatttgaagagctataagcctaaattgggtgggttctgtacacttttaa
cttatatccaattcataagccccatgttacttgctgtccagtgtcaccca
ggattatttctgctccatcaatctgcccgaatggtccactgatcctggta
atatgctttgagcatcaaactcatgcagcttcccctctctctatctctta
tctctctctactcttcattgccttctgatcctatctgaccccagccaagt
gaaagagttcagattcccctatactcatatagctggcagccacattt
gaattctctttccttttcatcctctcccttggctgatggaagtgcatccc
ggttttctcttctacccagcatttggtacctcagtttttattaacaaatc
agagaataaattgttcaataatagaactggtctcaaataattagttgaag
actgttgagatggctcagtgattaaaggtgcactgattgaaggtgaacac
atgagttcaaatttcagaacccacctggtagaagaagagaagaaacttct
ctaaattgtcatttgaccttccaagtacacacacacacacacacacacac
acacacacacacacacacaccttgatacctctatccatacacaggcacac
acacacaagcacacaaacacatgaacacacacctacaaatgtctgtgaaa
actggcatcagtaagcattaggaagctcctaatggaaaactatgaaacaa
tttgacaaacaaactaaataacacatgagactgtactataatggtgaaat
aagctataaacccatgctggtgtgaatggttgcatgtcaggtaaatgaac
attactgaaaccgaccgaacctgcgagccccagaagtgtctccaattcgc
aggatgcctagcaacccaggacctcagaatcatgggtgagtggaacagaa
catcaccaccaaagaatcccagacagtcttgtgccagcaggaagaggaac
aaaggaaccccaaactaccagaggctgggattcattctggttggggccag
ccccgccatcttcttcctgaacccagtggagggagccaaggacccagagg
actctccatactgaaagacccctagcacacccaaaacctaggcatcatgg
gactcaggaagtagatcggagctctagacttcttggacacctgccgtgca
gaaagagctagcctacagagagtgctctggaccactatgactcagatgag
aaatggactcctaggactggctgacagaggctaacataatcaaaggagga
acaagctttcagccagaagacatctaagattttctacaccagagattact
atatggtgaaaggcaagcatacgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_32271538_32272707
seq2: B6Ng01-108L08.b_50_1196

seq1  GAATTCCAGAGGATCTATAGATGTTACTTCTGGGAGGTGATCTCCCGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGGATCTATAGATGTTACTTCTGGGAGGTGATCTCCCGTCA  50

seq1  GTCAAAAGAACCAAGACTAGGTAATGTATTTGGGAAAGAAGTTAATTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAAGAACCAAGACTAGGTAATGTATTTGGGAAAGAAGTTAATTTGC  100

seq1  TTCATGATCTGAAATGTTGAAGGTCAAGGATAGGGCAAGCTCAGGTAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGATCTGAAATGTTGAAGGTCAAGGATAGGGCAAGCTCAGGTAGTC  150

seq1  AGGGACTTGTGATGTCTGATCCCAGGGTACACAGCAGAAGAATAACCGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTTGTGATGTCTGATCCCAGGGTACACAGCAGAAGAATAACCGGA  200

seq1  TATTGTGGAAGACAGAGAGCAGAGGCTCCACTCTGCTTCTCAAGCACCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGGAAGACAGAGAGCAGAGGCTCCACTCTGCTTCTCAAGCACCCA  250

seq1  TGATATGCTCACTGACCAGGCCTGCCACAGTGGGGAACAATACTCAACGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATGCTCACTGACCAGGCCTGCCACAGTGGGGAACAATACTCAACGT  300

seq1  GGCTATTGGTGTGTGCCTCATACATGTTAATGCATAGGTGGCCCTTCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATTGGTGTGTGCCTCATACATGTTAATGCATAGGTGGCCCTTCCTT  350

seq1  CGGACATGTTGGTTTTTGATGCAGATTGAGTATTTAGGAGACAAATTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACATGTTGGTTTTTGATGCAGATTGAGTATTTAGGAGACAAATTACC  400

seq1  CAGGCAGGTGGAGAAAATGTGTTATAGGTAATGAGGGCAGACCATATGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGGTGGAGAAAATGTGTTATAGGTAATGAGGGCAGACCATATGAA  450

seq1  GGCCCTGCCTTTTGCTTGTGTCACACTTACAGAGAAAGGGTGTCATACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGCCTTTTGCTTGTGTCACACTTACAGAGAAAGGGTGTCATACCT  500

seq1  AGTATAAAGTCTCTGCAAATGACAAACACAGTGTTGAAATGGTAAATTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAAAGTCTCTGCAAATGACAAACACAGTGTTGAAATGGTAAATTGC  550

seq1  AGGTACAGGTTTACACAGAGCAATCAGATGACCAGCAAAGTTGAAAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACAGGTTTACACAGAGCAATCAGATGACCAGCAAAGTTGAAAGAAA  600

seq1  TGATGTGAAAGTACATGGTACTTTCCACCTGTGATCCCCATTTGTGGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTGAAAGTACATGGTACTTTCCACCTGTGATCCCCATTTGTGGGAA  650

seq1  GCTGAGGTAGGTGTGCCCCAGTTACCTGTCTCGATCTCCTTAATCACAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGTAGGTGTGCCCCAGTTACCTGTCTCGATCTCCTTAATCACAAA  700

seq1  GATAAAAATTGTGCTCAGGTAGGGGGTTGTTCTACCAAGTTGGCTTCCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAAATTGTGCTCAGGTAGGGGGTTGTTCTACCAAGTTGGCTTCCAC  750

seq1  CTCTTCCTTGCCCTCCATGTTTGGCAACAGTGAGCAGAAGTTGGCTCTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCTTGCCCTCCATGTTTGGCAACAGTGAGCAGAAGTTGGCTCTAA  800

seq1  ATGAAATATATTTTAGCTACCCTCTATAAAAGACACAAAGCCTTGGTACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATATATTTTAGCTACCCTCTATAAAAGACACAAAGCCTTGGTACA  850

seq1  TTATTTGAAGAGCTATAAGCCTAAATTGGGTGGGTTCTGTACACTTTTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGAAGAGCTATAAGCCTAAATTGGGTGGGTTCTGTACACTTTTAA  900

seq1  CTTATATCCAATTCATAAGCCCCATGTTACTTGCTGTCCAAGTGTCACCC  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTTATATCCAATTCATAAGCCCCATGTTACTTGCTGTCC-AGTGTCACCC  949

seq1  AGGATTATTTCTGCTCCATCAATCTGCCCGAATGGTCCACTGATCCTGGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTATTTCTGCTCCATCAATCTGCCCGAATGGTCCACTGATCCTGGT  999

seq1  AATATGCTTTTGAGCCATCAAACCTCATGGCAGCCTTCCCCTCTCTCTAT  1050
      ||||||| |||||| ||||||| ||||| |||| ||||||||||||||||
seq2  AATATGC-TTTGAG-CATCAAA-CTCAT-GCAG-CTTCCCCTCTCTCTAT  1044

seq1  CTTCTTTATCCTCCTCTCTACTCTTCTATTGCCTTCTGATTCTTATCTCT  1100
      ||   |||||   ||||||||||||| ||||||||||||| |   | |||
seq2  CT--CTTATC--TCTCTCTACTCTTC-ATTGCCTTCTGATCC---TATCT  1086

seq1  GACCCCCAAGCCCAGTGAAAAGAAGTTCAGAATCCCCCTAATACTCCATT  1150
      ||||||  |||| |||||||   |||||||| |||||   ||||| ||| 
seq2  GACCCC--AGCCAAGTGAAA--GAGTTCAGATTCCCC--TATACT-CAT-  1128

seq1  ATTAGCTGGCAGCCACATTT  1170
        ||||||||||||||||||
seq2  -ATAGCTGGCAGCCACATTT  1147

seq1: chr7_32436179_32437196
seq2: B6Ng01-108L08.g_124_1144 (reverse)

seq1  TTCGTATGCTTGCCTTTCACCATATTGTAATCTCTGGTGTTAGAAAATC-  49
      ||||||||||||||||||||||||| ||||||||||||| ||||||||| 
seq2  TTCGTATGCTTGCCTTTCACCATATAGTAATCTCTGGTG-TAGAAAATCT  49

seq1  TAGATGTC-TCTGGCTG-AAGCTTGTTCCTCCTTTGATTCTGTTAGCCTC  97
      |||||||| |||||||| ||||||||||||||||||||| ||||||||||
seq2  TAGATGTCTTCTGGCTGAAAGCTTGTTCCTCCTTTGATTATGTTAGCCTC  99

seq1  TGTCAG-CAGTCCTAGGAGTCCATTTCTCATCTGAGTCATAGTGGT-CAG  145
      |||||| ||||||||||||||||||||||||||||||||||||||| |||
seq2  TGTCAGCCAGTCCTAGGAGTCCATTTCTCATCTGAGTCATAGTGGTCCAG  149

seq1  AGCACTCTCTGTAGGCTAGCTCTTCTCTTGCACGGCAGGTGTCC-AGAAG  194
      |||||||||||||||||||||||| || |||||||||||||||| |||||
seq2  AGCACTCTCTGTAGGCTAGCTCTT-TC-TGCACGGCAGGTGTCCAAGAAG  197

seq1  TCTAGAGCTCCGATCTACTTCCTGAGTCCCATGATGCCTAGGTTTTGGGT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAGCTCCGATCTACTTCCTGAGTCCCATGATGCCTAGGTTTTGGGT  247

seq1  GTGCTAGGGGTCTTTCAGTATGGAGAGTCCTCTGGGTCCTTGGCTCCCTC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAGGGGTCTTTCAGTATGGAGAGTCCTCTGGGTCCTTGGCTCCCTC  297

seq1  CACTGGGTTCAGGAAGAAGATGGCGGGGCTGGCCCCAACCAGAATGAATC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGTTCAGGAAGAAGATGGCGGGGCTGGCCCCAACCAGAATGAATC  347

seq1  CCAGCCTCTGGTAGTTTGGGGTTCCTTTGTTCCTCTTCCTGCTGGCACAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTCTGGTAGTTTGGGGTTCCTTTGTTCCTCTTCCTGCTGGCACAA  397

seq1  GACTGTCTGGGATTCTTTGGTGGTGATGTTCTGTTCCACTCACCCATGAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTCTGGGATTCTTTGGTGGTGATGTTCTGTTCCACTCACCCATGAT  447

seq1  TCTGAGGTCCTGGGTTGCTAGGCATCCTGCGAATTGGAGACACTTCTGGG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGTCCTGGGTTGCTAGGCATCCTGCGAATTGGAGACACTTCTGGG  497

seq1  GCTCGCAGGTTCGGTCGGTTTCAGTAATGTTCATTTACCTGACATGCAAC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGCAGGTTCGGTCGGTTTCAGTAATGTTCATTTACCTGACATGCAAC  547

seq1  CATTCACACCAGCATGGGTTTATAGCTTATTTCACCATTATAGTACAGTC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCACACCAGCATGGGTTTATAGCTTATTTCACCATTATAGTACAGTC  597

seq1  TCATGTGTTATTTAGTTTGTTTGTCAAATTGTTTCATAGTTTTCCATTAG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGTTATTTAGTTTGTTTGTCAAATTGTTTCATAGTTTTCCATTAG  647

seq1  GAGCTTCCTAATGCTTACTGATGCCAGTTTTCACAGACATTTGTAGGTGT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTCCTAATGCTTACTGATGCCAGTTTTCACAGACATTTGTAGGTGT  697

seq1  GTGTTCATGTGTTTGTGTGCTTGTGTGTGTGTGCCTGTGTATGGATAGAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCATGTGTTTGTGTGCTTGTGTGTGTGTGCCTGTGTATGGATAGAG  747

seq1  GTATCAAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  797

seq1  GTACTTGGAAGGTCAAATGACAATTTAGAGAAGTTTCTTCTCTTCTTCTA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTGGAAGGTCAAATGACAATTTAGAGAAGTTTCTTCTCTTCTTCTA  847

seq1  CCAGGTGGGTTCTGAAATTTGAACTCATGTGTTCACCTTCAATCAGTGCA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTGGGTTCTGAAATTTGAACTCATGTGTTCACCTTCAATCAGTGCA  897

seq1  CCTTTAATCACTGAGCCATCTCAACAGTCTTCAACTAATTATTTGAGACC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAATCACTGAGCCATCTCAACAGTCTTCAACTAATTATTTGAGACC  947

seq1  AGTTCTATTATTGAACAATTTATTCTCTGATTTGTTAATAAAAACTGAGG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTATTATTGAACAATTTATTCTCTGATTTGTTAATAAAAACTGAGG  997

seq1  TACCAAATGCTGGGTAGAAGAGAA  1018
      ||||||||||||||||||||||||
seq2  TACCAAATGCTGGGTAGAAGAGAA  1021