BAC Information

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BAC

Clone NameB6Ng01-109F09
Chromosome7 (Build37)5 (Build37)
Map Location 101,281,485 - 101,281,9388,554,631 - 8,555,179
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040298, LOC666783, EG638305
Downstream geneEG545982, EG666816, LOC100040132
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109F09.bB6Ng01-109F09.g
ACCDH916270DH916271
length448981
definitionDH916270|Mus musculus domesticus DNA, BAC clone: B6Ng01-109F09, 5' end.DH916271|Mus musculus domesticus DNA, BAC clone: B6Ng01-109F09, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(101,281,485 - 101,281,938)(8,554,631 - 8,555,179)
sequence
tcaactgagaaataccaaatggctgagaagtacctaaaatatgtttaata
tccttaatcatcagggaaatgcaaatcaaaacaacactgagattccatct
cacaccagtcagaattgctaagatcaaaaactcatgtgacagcaaatgct
ggtaaggatgtggaaaaagaattctctcacttttttctgtaactgcttgc
aggacagaattttaaacaacattatttaagcaatattttaaaaagttaaa
tttgtcaaccattaaaagttgtttgaaagagtacacatggagggacccat
ggctctggttgcatatgtggtagaggatggccttgttggatatcagtggg
aggagcagcccttaggcctgacgggttttgatgccccagtgtagtggagt
gccagagtgggaaggcaggagtggatgggtggttggggagcaccctta
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaagaatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggcttttttggctgggagactattaataactgcttctatttctt
taggggatatgggactgtttagaaggtcaacttgatcctgattcaacttt
ggtacctggtatctgtccagaaatttgtccatttcgtccaggttttccag
ttttgttgagtatagccttttgtagaaggatctgattgtgttttggattt
cttcaggatctgttgttatgtctcccttttcatttctgattttgttaatt
aggattttgtccctgtgccctttagtgagtctagctaagggtttatctat
cttgttgattttctcaaagaaccaactcctcgtttggttaattctttgaa
tagttcttcttgtttccacttggttgatttcacccctgagtttgattatt
tcctgccgtctactcctcttgggtgaatttgcttcctttttttctagagc
ttttagatgtgttgtcaagctgctagtatgtgctctctcccgttttttct
gaagcactcatagctatggagtttccctctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_101281485_101281938
seq2: B6Ng01-109F09.b_46_499

seq1  GAATTCTCAACTGAGAAATACCAAATGGCTGAGAAGTACCTAAAATATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAACTGAGAAATACCAAATGGCTGAGAAGTACCTAAAATATGT  50

seq1  TTAATATCCTTAATCATCAGGGAAATGCAAATCAAAACAACACTGAGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATCCTTAATCATCAGGGAAATGCAAATCAAAACAACACTGAGATT  100

seq1  CCATCTCACACCAGTCAGAATTGCTAAGATCAAAAACTCATGTGACAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCACACCAGTCAGAATTGCTAAGATCAAAAACTCATGTGACAGCA  150

seq1  AATGCTGGTAAGGATGTGGAAAAAGAATTCTCTCACTTTTTTCTGTAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGGTAAGGATGTGGAAAAAGAATTCTCTCACTTTTTTCTGTAACT  200

seq1  GCTTGCAGGACAGAATTTTAAACAACATTATTTAAGCAATATTTTAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCAGGACAGAATTTTAAACAACATTATTTAAGCAATATTTTAAAAA  250

seq1  GTTAAATTTGTCAACCATTAAAAGTTGTTTGAAAGAGTACACATGGAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAATTTGTCAACCATTAAAAGTTGTTTGAAAGAGTACACATGGAGGG  300

seq1  ACCCATGGCTCTGGTTGCATATGTGGTAGAGGATGGCCTTGTTGGATATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATGGCTCTGGTTGCATATGTGGTAGAGGATGGCCTTGTTGGATATC  350

seq1  AGTGGGAGGAGCAGCCCTTAGGCCTGACGGGTTTTGATGCCCCAGTGTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGAGGAGCAGCCCTTAGGCCTGACGGGTTTTGATGCCCCAGTGTAG  400

seq1  TGGAGTGCCAGAGTGGGAAGGCAGGAGTGGATGGGTGGTTGGGGAGCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTGCCAGAGTGGGAAGGCAGGAGTGGATGGGTGGTTGGGGAGCACC  450

seq1  CTTA  454
      ||||
seq2  CTTA  454

seq1: chr5_8554631_8555179
seq2: B6Ng01-109F09.g_66_613 (reverse)

seq1  AGTTGAATCAGGATCAAGTTGACCTTCTAAACAGTCCCATATCCCCTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAATCAGGATCAAGTTGACCTTCTAAACAGTCCCATATCCCCTAAA  50

seq1  GAAATAGAAGCAGTTATTAATAGTCTCCCAGCCAAAAAAAGCCCAGGACC  100
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GAAATAGAAGCAGTTATTAATAGTCTCCCAGCC-AAAAAAGCCCAGGACC  99

seq1  AGACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAACTC  149

seq1  CAGTTCTGCACAAACTTTTTCACAAGATAGAAGTAGAAGGTATTCTACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTGCACAAACTTTTTCACAAGATAGAAGTAGAAGGTATTCTACCC  199

seq1  AACTCATTTTATGAAGCCACTATTACTCTGATACCTAAACCACAGAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATTTTATGAAGCCACTATTACTCTGATACCTAAACCACAGAAAGA  249

seq1  TCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTATGAACATCGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTATGAACATCGATG  299

seq1  CAAAAATTCTTAATAAAATTCTCGCTAACCGAATCCAAGAACACATTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATTCTTAATAAAATTCTCGCTAACCGAATCCAAGAACACATTAAA  349

seq1  GCAATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGGATG  399

seq1  GTTTAATATACGAAAATCCATCAATGTAATCCATTATATAAACAAACTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAATATACGAAAATCCATCAATGTAATCCATTATATAAACAAACTCA  449

seq1  AAGACAAAAACCACATGATCATCTCGTTAGATGCAGAAAAAGCATTTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAAAACCACATGATCATCTCGTTAGATGCAGAAAAAGCATTTGAC  499

seq1  AAGATCCAACACCCATTCATGATAAAAGTTCTGGAAAGATCAGGAATTC  549
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCCAACACCCATTCATGATAAAAGTTCTGGAAAGATCAGGAATTC  548