BAC Information

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BAC

Clone NameB6Ng01-109I13
Chromosome7 (Build37)
Map Location 82,132,428 - 82,269,980
singlet/doubletdoublet
Overlap geneSv2b
Upstream geneSt8sia2, LOC100042127, LOC100042140, LOC546979, Slco3a1, EG665308, EG665641, 0610006L08Rik
Downstream gene1500012K07Rik, LOC100042171, Akap13, Klhl25, LOC100042210
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109I13.bB6Ng01-109I13.g
ACCDH916417DH916418
length1,076436
definitionDH916417|Mus musculus domesticus DNA, BAC clone: B6Ng01-109I13, 5' end.DH916418|Mus musculus domesticus DNA, BAC clone: B6Ng01-109I13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,268,900 - 82,269,980)(82,132,428 - 82,132,869)
sequence
gaattctagcgctccaccactcttgctactttggctgtgctcaccatggc
ttaaagacctctcagagcagcagggacacagggcgctcctttgagtattg
tcagagtccccccccccccaccagggcctcagtgggaccccaccaccacc
accagggcctcagcgggaaatgtattctgattatccctgccttagagctg
agcaaacagacgtaagcaattgatcgcggccacagctagcaaggagatgg
agtttgaatccatttctcaattacatggttcaaaaaatctctttgcactg
gatttcttgctccatgcctgtgtttatgcttcctcctagcagggataagt
gagctccagttccagtaaggatcccatctctataggtaaattggagagtg
gttgagaaggatatccaacagcttcaggtctcaatatgcatgtgtataca
catagatacccccacacatgtgaacacacaaatacacatgcatacaacac
acaaatatacacatgtcaaaatgtctctaaaattggcattagtttcattt
ctctttactttttaatttttttatggtttttccagacagggtttctctgt
tgccctggctgtcctggaactcactttgtaaactaggctggcctcggact
cagaaatctgcctgcctctgcctcccaagtgctgggattaaaggcgtgca
tcatcacatctgtcttcatttctctttattctaggaacttgagcagatta
tcacatttttggacaaacatcactgtgactttgaggtcacagcttgccca
taaagagggcatctgcacttctgctttctttacccaggtcccatccactc
ccatgaaccaaggcttctttctctcctcagacctctacaaacacaagttc
atcactgtcggtttatcaattccacctttctggagcagaaggagggctgc
cacatggactttgaggagacatgattttctgatttacctcgtcagcttct
cggcagcctctctgtctgcctgggaacataaatttcttgcctgcctcatg
aagaattggaagactcagaatgattg
tttccccaatgaataccaggccaaggactaatatactggtccaaaaacct
caggctctggccatgaggtaaacaattctctgtttatgttcccactccat
cactaggcatggaaacatttgggggctaagttcagggcagataagcatct
gcttttcccactcctcacttacagattttctagaagtgttccttcagcca
atcacataagtatttctattcaagacattgctcctagagagtctcacttt
gatctgtcttccagaaggtttgagccaaggacaaaatcatatatttatac
atgcacaaaattcatgaatgttcatgtgtaaagttataaatgtcactgaa
atcacccccacccatcacacacagaaacagagagagagagagagagaggg
agagagagagagagagagagagagagagagagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_82268900_82269980
seq2: B6Ng01-109I13.b_49_1124 (reverse)

seq1  CAATCATCTTGAGTCTTCCAATTCTGTCCATGA-GCAGGGCAGAAA-TTA  48
      |||||||  |||||||||||||||  | ||||| |||||  ||||| |||
seq2  CAATCATTCTGAGTCTTCCAATTC--TTCATGAGGCAGGCAAGAAATTTA  48

seq1  TGTTCCCAGGCAAGACAGAGAGGCTGCCGAGGAAGCTGACGAGGTAAATC  98
      ||||||||||| |||||||||||||||||| |||||||||||||||||||
seq2  TGTTCCCAGGC-AGACAGAGAGGCTGCCGA-GAAGCTGACGAGGTAAATC  96

seq1  AGAAAATCATTGTCCTCTTCAAAGTCCATGTGGCAGCCCTCCTTCTGCTC  148
      ||||||||| ||| ||| ||||||||||||||||||||||||||||||||
seq2  AGAAAATCA-TGT-CTCCTCAAAGTCCATGTGGCAGCCCTCCTTCTGCTC  144

seq1  CAGAAAGGTGGAATTGATAAACCGACAGTTGATGAACTTGTGTTTGTAGA  198
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CAGAAAGGTGGAATTGATAAACCGACAG-TGATGAACTTGTGTTTGTAGA  193

seq1  GGTCTGAGGAGAGAAAGAAGCCTTGGTTCATGGGAGTGGATGGGACCTGG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGAGGAGAGAAAGAAGCCTTGGTTCATGGGAGTGGATGGGACCTGG  243

seq1  GTAAAGAAAGCAGAAGTGCAGATGCCCTCTTTATGGGCAAGCTGTGACCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGAAAGCAGAAGTGCAGATGCCCTCTTTATGGGCAAGCTGTGACCT  293

seq1  CAAAGTCACAGTGATGTTTGTCCAAAAATGTGATAATCTGCTCAAGTTCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTCACAGTGATGTTTGTCCAAAAATGTGATAATCTGCTCAAGTTCC  343

seq1  TAGAATAAAGAGAAATGAAGACAGATGTGATGATGCACGCCTTTAATCCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATAAAGAGAAATGAAGACAGATGTGATGATGCACGCCTTTAATCCC  393

seq1  AGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTCCGAGGCCAGCCTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTCCGAGGCCAGCCTA  443

seq1  GTTTACAAAGTGAGTTCCAGGACAGCCAGGGCAACAGAGAAACCCTGTCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACAAAGTGAGTTCCAGGACAGCCAGGGCAACAGAGAAACCCTGTCT  493

seq1  GGAAAAACCATAAAAAAATTAAAAAGTAAAGAGAAATGAAACTAATGCCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAACCATAAAAAAATTAAAAAGTAAAGAGAAATGAAACTAATGCCA  543

seq1  ATTTTAGAGACATTTTGACATGTGTATATTTGTGTGTTGTATGCATGTGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGAGACATTTTGACATGTGTATATTTGTGTGTTGTATGCATGTGT  593

seq1  ATTTGTGTGTTCACATGTGTGGGGGTATCTATGTGTATACACATGCATAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGTGTTCACATGTGTGGGGGTATCTATGTGTATACACATGCATAT  643

seq1  TGAGACCTGAAGCTGTTGGATATCCTTCTCAACCACTCTCCAATTTACCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACCTGAAGCTGTTGGATATCCTTCTCAACCACTCTCCAATTTACCT  693

seq1  ATAGAGATGGGATCCTTACTGGAACTGGAGCTCACTTATCCCTGCTAGGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGATGGGATCCTTACTGGAACTGGAGCTCACTTATCCCTGCTAGGA  743

seq1  GGAAGCATAAACACAGGCATGGAGCAAGAAATCCAGTGCAAAGAGATTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCATAAACACAGGCATGGAGCAAGAAATCCAGTGCAAAGAGATTTT  793

seq1  TTGAACCATGTAATTGAGAAATGGATTCAAACTCCATCTCCTTGCTAGCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACCATGTAATTGAGAAATGGATTCAAACTCCATCTCCTTGCTAGCT  843

seq1  GTGGCCGCGATCAATTGCTTACGTCTGTTTGCTCAGCTCTAAGGCAGGGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCGCGATCAATTGCTTACGTCTGTTTGCTCAGCTCTAAGGCAGGGA  893

seq1  TAATCAGAATACATTTCCCGCTGAGGCCCTGGTGGTGGTGGTGGGGTCCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGAATACATTTCCCGCTGAGGCCCTGGTGGTGGTGGTGGGGTCCC  943

seq1  ACTGAGGCCCTGGTGGGGGGGGGGGGACTCTGACAATACTCAAAGGAGCG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGGCCCTGGTGGGGGGGGGGGGACTCTGACAATACTCAAAGGAGCG  993

seq1  CCCTGTGTCCCTGCTGCTCTGAGAGGTCTTTAAGCCATGGTGAGCACAGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGTCCCTGCTGCTCTGAGAGGTCTTTAAGCCATGGTGAGCACAGC  1043

seq1  CAAAGTAGCAAGAGTGGTGGAGCGCTAGAATTC  1081
      |||||||||||||||||||||||||||||||||
seq2  CAAAGTAGCAAGAGTGGTGGAGCGCTAGAATTC  1076

seq1: chr7_82132428_82132869
seq2: B6Ng01-109I13.g_69_510

seq1  GAATTCTTTCCCCAATGAATACCAGGCCAAGGACTAATATACTGGTCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCCCAATGAATACCAGGCCAAGGACTAATATACTGGTCCAA  50

seq1  AAACCTCAGGCTCTGGCCATGAGGTAAACAATTCTCTGTTTATGTTCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTCAGGCTCTGGCCATGAGGTAAACAATTCTCTGTTTATGTTCCCA  100

seq1  CTCCATCACTAGGCATGGAAACATTTGGGGGCTAAGTTCAGGGCAGATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATCACTAGGCATGGAAACATTTGGGGGCTAAGTTCAGGGCAGATAA  150

seq1  GCATCTGCTTTTCCCACTCCTCACTTACAGATTTTCTAGAAGTGTTCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTGCTTTTCCCACTCCTCACTTACAGATTTTCTAGAAGTGTTCCTT  200

seq1  CAGCCAATCACATAAGTATTTCTATTCAAGACATTGCTCCTAGAGAGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAATCACATAAGTATTTCTATTCAAGACATTGCTCCTAGAGAGTCT  250

seq1  CACTTTGATCTGTCTTCCAGAAGGTTTGAGCCAAGGACAAAATCATATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGATCTGTCTTCCAGAAGGTTTGAGCCAAGGACAAAATCATATAT  300

seq1  TTATACATGCACAAAATTCATGAATGTTCATGTGTAAAGTTATAAATGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACATGCACAAAATTCATGAATGTTCATGTGTAAAGTTATAAATGTC  350

seq1  ACTGAAATCACCCCCACCCATCACACACAGAAACAGAGAGAGAGAGAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAATCACCCCCACCCATCACACACAGAAACAGAGAGAGAGAGAGAG  400

seq1  AGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  442
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  442