BAC Information

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BAC

Clone NameB6Ng01-110F09
Chromosome7 (Build37)
Map Location 59,196,645 - 59,330,290
singlet/doubletdoublet
Overlap geneGas2, 1700015G11Rik, EG668783
Upstream geneEG668766, EG668767, EG668768, EG638046, EG668770, EG668774, LOC668776, LOC434186, LOC546971, LOC668779, Tmem16e, Slc17a6, EG620599, LOC654473, LOC100040608
Downstream geneEG620782, LOC100040692
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110F09.bB6Ng01-110F09.g
ACCDH916983DH916984
length1,1341,143
definitionDH916983|Mus musculus domesticus DNA, BAC clone: B6Ng01-110F09, 5' end.DH916984|Mus musculus domesticus DNA, BAC clone: B6Ng01-110F09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,329,126 - 59,330,290)(59,196,645 - 59,197,806)
sequence
gaattcattagttcactgactacatggtaggaaaatacctaattttcctt
cctgaaaggtaattgtggctcattcttttaagtaaactgggtcaaatgtc
aaacaacagttggggagagggggcaaatctatattctactttgctgactt
tgtagatatttttaatgtgtttactttgggttggtctgcaattgactatc
tatggcaaaatagtaatctgtcctgtaaaacatttcttttttaaaatatt
tttattattacatattttcctcaattacatttagaatgctatctcaaaag
tcccccatactctccccccccccccacttccctacccacccattcccatt
ttttggccctggcattcccctgtactggggcatataaagtttgcgtgtcc
aatgggcctctttttccagtgatggccgactaggccatcttttgatacat
atgcagctagagtcaagagctccggggtactggttagttcatattgttgt
tccacctacagggttgcagatctctttagctccttggatactttctctag
ctcctccattgggggccctgtgctccatccaatagctgactgtgagcatc
cacttatgtgtttgctaggcccggcctagtctcacaagagacagctatat
cagggtcctttcagccaacgcttgctagtgtatgcaatggtgtcatcgtt
tggaggataattttgggatggatccctggatatggcagtctctagatttc
taaaacaattgctgagtatacgataatttaatgcttaaaaaacacaattc
aacttttacttttgacttcaaattcaatttttccctaaaatcttctataa
tgttataaccaggtttttctgattaaaatacattatatgaaatgttaata
taaatttttgaaaaaattgcaatttatatttatatcaaacttaatctaaa
gtacatatataaattgctgctaactattttgcttaaattctatcttcaaa
tgtagacagatagatacaatgcaatagatgctttcatttctacatcacca
cctacagggttctctcttctgagtcaacaaggctgcctctggctgttctg
gactctgtacctagacaaagaagaatgtggaggg
gaattcaaaagcccaaggaagcatcggattctgggctcggtgctgacttt
tctgtgtcaggggcacaaacagtcttcagctttctcaggtaaagaagaat
ctccaaggaaacagtttccacctgtgattctgttctaatttcatcaaagc
tggctggcctttttgtttgtgttggaaatgagctgagcctgttgctgctc
taatagcatttttgcgattgttttagtatttttaagacaaagaatatgca
ccttgttcttgggaggtggccttcatccacctgttggtgaatataaaata
ttttctaatctatttatattttaaaatatgatgttttcacttactattga
tgtgcagttggcatgatcacagtgttgtggattcctccagacttaactag
gtttatattattctcatgagaacattcaacacaggcaggatttatacctt
aatggagctgagactccacagaagtctgtaacagcttagagggttgcctt
ccaaagtctttctggcctgttaggaaatctgaggttgttgtgaatcaatt
ctggtgatagaatagaatccatagaacaccatgtgtcttgtaacgattca
tcaattggtttataaatacaaaaaggtagaaatacaaaatgtggtagcca
aatatttatagtaactgtttattatggaacaaaagttacttaatagaata
gaggctgttgtggcattgtaaactgtttgttcttaaatcttacataagct
ttgcagctctcaaaatgcatctgatgcacagaatccttctctccagattc
tgaagggaggaaaaaaaaaagaaataaaagaaaaaagaatcacagtcttc
acttttatgacttaaaaggcccaagttaacagactgtgagtgtctatgac
tggaaatgggctggagtccgtggaggggaagatttctccctagaggaact
gagtgaactagtgaagccgatcacttaaccatgtccttcatggcagagag
aagtttgggtaatgagtcaaaggacagcaactgagccctctgtcagatca
gatatcacatgaggaaaactgcctctaagactgtctgcacttgttacagg
gacatctgtaaagtagcagccacaccgcggactaggcaaggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_59329126_59330290
seq2: B6Ng01-110F09.b_45_1178 (reverse)

seq1  CCCT-CACATTCTTCTTTGTCCTAGGTACAGAGTTCAAGAACAGCCAGAG  49
      |||| ||||||||||||||| |||||||||||| || |||||||||||||
seq2  CCCTCCACATTCTTCTTTGT-CTAGGTACAGAG-TCCAGAACAGCCAGAG  48

seq1  GCAGGCTTTGTGTTTGACTCAAGGAAGAGAGAACACTGTAGGTGTGTTGA  99
      |||| |||     ||||||||  ||||||||||| ||||||||| ||   
seq2  GCAGCCTT----GTTGACTCA--GAAGAGAGAACCCTGTAGGTG-GT--G  89

seq1  ATGTAGAAAATTGAAAGCATTCTATTTGCATGTGTATTCTTATCTGTCTA  149
      |||||||||  |||||||| |||| |||||| |||||   ||||||||| 
seq2  ATGTAGAAA--TGAAAGCA-TCTA-TTGCAT-TGTAT--CTATCTGTCT-  131

seq1  ACAATTTTGAAGATAGAATTTAAGCAAAATAAGTTTTAGCAGCAATTTTA  199
      |||  ||||||||||||||||||||||||||    |||||||||| ||||
seq2  ACA--TTTGAAGATAGAATTTAAGCAAAATA---GTTAGCAGCAA-TTTA  175

seq1  TAATATGTACTTTAGAATTAAGTTTTGATATAAATTATAAATTGCAATTT  249
      | ||||||||||||| |||||| ||||||||||| |||||||||||| ||
seq2  T-ATATGTACTTTAG-ATTAAG-TTTGATATAAA-TATAAATTGCAA-TT  220

seq1  TTTTCAAAAATTTTATATTAACATTTCATATAATGTATTTTAATCAGAAA  299
      |||||||||| |||||||||||||||||||||||||||||||||||| ||
seq2  TTTTCAAAAA-TTTATATTAACATTTCATATAATGTATTTTAATCAG-AA  268

seq1  AAACCTGGTTATAACATTATAGAAGATTTTAGGGAAAAATTGAATTTGAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTGGTTATAACATTATAGAAGATTTTAGGGAAAAATTGAATTTGAA  318

seq1  GTCAAAAGTAAAAGTTGAATTGTGTTTTTTAAGCATTAAATTATCGTATA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAAGTAAAAGTTGAATTGTGTTTTTTAAGCATTAAATTATCGTATA  368

seq1  CTCAGCAATTGTTTTAGAAATCTAGAGACTGCCATATCCAGGGATCCATC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCAATTGTTTTAGAAATCTAGAGACTGCCATATCCAGGGATCCATC  418

seq1  CCAAAATTATCCTCCAAACGATGACACCATTGCATACACTAGCAAGCGTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATTATCCTCCAAACGATGACACCATTGCATACACTAGCAAGCGTT  468

seq1  GGCTGAAAGGACCCTGATATAGCTGTCTCTTGTGAGACTAGGCCGGGCCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAAAGGACCCTGATATAGCTGTCTCTTGTGAGACTAGGCCGGGCCT  518

seq1  AGCAAACACATAAGTGGATGCTCACAGTCAGCTATTGGATGGAGCACAGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAACACATAAGTGGATGCTCACAGTCAGCTATTGGATGGAGCACAGG  568

seq1  GCCCCCAATGGAGGAGCTAGAGAAAGTATCCAAGGAGCTAAAGAGATCTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCCAATGGAGGAGCTAGAGAAAGTATCCAAGGAGCTAAAGAGATCTG  618

seq1  CAACCCTGTAGGTGGAACAACAATATGAACTAACCAGTACCCCGGAGCTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCTGTAGGTGGAACAACAATATGAACTAACCAGTACCCCGGAGCTC  668

seq1  TTGACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTG  718

seq1  GAAAAAGAGGCCCATTGGACACGCAAACTTTATATGCCCCAGTACAGGGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGAGGCCCATTGGACACGCAAACTTTATATGCCCCAGTACAGGGG  768

seq1  AATGCCAGGGCCAAAAAATGGGAATGGGTGGGTAGGGAAGTGGGGGGGGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCAGGGCCAAAAAATGGGAATGGGTGGGTAGGGAAGTGGGGGGGGG  818

seq1  GGGAGAGTATGGGGGACTTTTGAGATAGCATTCTAAATGTAATTGAGGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGTATGGGGGACTTTTGAGATAGCATTCTAAATGTAATTGAGGAA  868

seq1  AATATGTAATAATAAAAATATTTTAAAAAAGAAATGTTTTACAGGACAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTAATAATAAAAATATTTTAAAAAAGAAATGTTTTACAGGACAGA  918

seq1  TTACTATTTTGCCATAGATAGTCAATTGCAGACCAACCCAAAGTAAACAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATTTTGCCATAGATAGTCAATTGCAGACCAACCCAAAGTAAACAC  968

seq1  ATTAAAAATATCTACAAAGTCAGCAAAGTAGAATATAGATTTGCCCCCTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAATATCTACAAAGTCAGCAAAGTAGAATATAGATTTGCCCCCTC  1018

seq1  TCCCCAACTGTTGTTTGACATTTGACCCAGTTTACTTAAAAGAATGAGCC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAACTGTTGTTTGACATTTGACCCAGTTTACTTAAAAGAATGAGCC  1068

seq1  ACAATTACCTTTCAGGAAGGAAAATTAGGTATTTTCCTACCATGTAGTCA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTACCTTTCAGGAAGGAAAATTAGGTATTTTCCTACCATGTAGTCA  1118

seq1  GTGAACTAATGAATTC  1165
      ||||||||||||||||
seq2  GTGAACTAATGAATTC  1134

seq1: chr7_59196645_59197806
seq2: B6Ng01-110F09.g_69_1211

seq1  GAATTCAAAAGCCCAAGGAAGCATCGGATTCTGGGCTCGGTGCTGACTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAGCCCAAGGAAGCATCGGATTCTGGGCTCGGTGCTGACTTT  50

seq1  TCTGTGTCAGGGGCACAAACAGTCTTCAGCTTTCTCAGGTAAAGAAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTCAGGGGCACAAACAGTCTTCAGCTTTCTCAGGTAAAGAAGAAT  100

seq1  CTCCAAGGAAACAGTTTCCACCTGTGATTCTGTTCTAATTTCATCAAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAGGAAACAGTTTCCACCTGTGATTCTGTTCTAATTTCATCAAAGC  150

seq1  TGGCTGGCCTTTTTGTTTGTGTTGGAAATGAGCTGAGCCTGTTGCTGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGGCCTTTTTGTTTGTGTTGGAAATGAGCTGAGCCTGTTGCTGCTC  200

seq1  TAATAGCATTTTTGCGATTGTTTTAGTATTTTTAAGACAAAGAATATGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGCATTTTTGCGATTGTTTTAGTATTTTTAAGACAAAGAATATGCA  250

seq1  CCTTGTTCTTGGGAGGTGGCCTTCATCCACCTGTTGGTGAATATAAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTCTTGGGAGGTGGCCTTCATCCACCTGTTGGTGAATATAAAATA  300

seq1  TTTTCTAATCTATTTATATTTTAAAATATGATGTTTTCACTTACTATTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAATCTATTTATATTTTAAAATATGATGTTTTCACTTACTATTGA  350

seq1  TGTGCAGTTGGCATGATCACAGTGTTGTGGATTCCTCCAGACTTAACTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGTTGGCATGATCACAGTGTTGTGGATTCCTCCAGACTTAACTAG  400

seq1  GTTTATATTATTCTCATGAGAACATTCAACACAGGCAGGATTTATACCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATATTATTCTCATGAGAACATTCAACACAGGCAGGATTTATACCTT  450

seq1  AATGGAGCTGAGACTCCACAGAAGTCTGTAACAGCTTAGAGGGTTGCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGCTGAGACTCCACAGAAGTCTGTAACAGCTTAGAGGGTTGCCTT  500

seq1  CCAAAGTCTTTCTGGCCTGTTAGGAAATCTGAGGTTGTTGTGAATCAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTCTTTCTGGCCTGTTAGGAAATCTGAGGTTGTTGTGAATCAATT  550

seq1  CTGGTGATAGAATAGAATCCATAGAACACCATGTGTCTTGTAACGATTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGATAGAATAGAATCCATAGAACACCATGTGTCTTGTAACGATTCA  600

seq1  TCAATTGGTTTATAAATACAAAAAGGTAGAAATACAAAATGTGGTAGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTGGTTTATAAATACAAAAAGGTAGAAATACAAAATGTGGTAGCCA  650

seq1  AATATTTATAGTAACTGTTTATTATGGAACAAAAGTTACTTAATAGAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTATAGTAACTGTTTATTATGGAACAAAAGTTACTTAATAGAATA  700

seq1  GAGGCTGTTGTGGCATTGTAAACTGTTTGTTCTTAAATCTTACATAAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGTTGTGGCATTGTAAACTGTTTGTTCTTAAATCTTACATAAGCT  750

seq1  TTGCAGCTCTCAAAATGCATCTGATGCACAGAATCCTTCTCTCCAGATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGCTCTCAAAATGCATCTGATGCACAGAATCCTTCTCTCCAGATTC  800

seq1  TGAAGGGAGGAAAAAAAAAAGAAATAAAAGAAAAAAGAATCACAGTCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGGAGGAAAAAAAAAAGAAATAAAAGAAAAAAGAATCACAGTCTTC  850

seq1  AC-TTTATGACTTAAAAGGCCCAAGTTAACAGACATGTTGAGTGTCTATG  899
      || ||||||||||||||||||||||||||||||| || ||||||||||||
seq2  ACTTTTATGACTTAAAAGGCCCAAGTTAACAGAC-TG-TGAGTGTCTATG  898

seq1  ACTGGAAATGGCCTGGAGTCCGTGGAGGGGGAGATTTCTCCCTAGAGAAA  949
      ||||||||||| |||||||||||||||||| |||||||||||||||| ||
seq2  ACTGGAAATGGGCTGGAGTCCGTGGAGGGGAAGATTTCTCCCTAGAGGAA  948

seq1  CTGAGTGAACTAGTGAAGCCGAATCAACTTAACCATGTCCTTCATGGCAG  999
      ||||||||||||||||||||| ||| ||||||||||||||||||||||||
seq2  CTGAGTGAACTAGTGAAGCCG-ATC-ACTTAACCATGTCCTTCATGGCAG  996

seq1  AGAGAAGTTTGGGTAATGAGTCAAAAGGACAGCAACTGAGCCCCCTCTGT  1049
      |||||||||||||||||||||| |||||||||||||||||  ||||||||
seq2  AGAGAAGTTTGGGTAATGAGTC-AAAGGACAGCAACTGAG--CCCTCTGT  1043

seq1  CAGGATCAGATATCACCATGAGGAAAACTGCCTCCCTAGAGACGTGTCCT  1099
      || |||||||||||| |||||||||||||||||  ||| |||| ||| ||
seq2  CA-GATCAGATATCA-CATGAGGAAAACTGCCT--CTA-AGAC-TGT-CT  1086

seq1  GCACTTGTATACAGTGACATCTGTTAAAGTAGCAAGCCACCACCGCAGGA  1149
      |||||||| ||||| |||||||| ||||||||| ||||| |||||| |||
seq2  GCACTTGT-TACAGGGACATCTG-TAAAGTAGC-AGCCA-CACCGC-GGA  1131

seq1  CATAGGCAAGGTT  1162
      | |||||||||||
seq2  C-TAGGCAAGGTT  1143