BAC Information

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BAC

Clone NameB6Ng01-111A04
Chromosome7 (Build37)
Map Location 98,345,603 - 98,346,756
singlet/doubletsinglet
Overlap geneDlg2
Upstream genePicalm, Ccdc83, Sytl2, Ccdc89, Crebzf, Tmem126a, Tmem126b, B230218P12Rik, LOC666689, LOC621816, LOC100039943
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-111A04.bB6Ng01-111A04.g
ACCDH917471DH917472
length1,2741,124
definitionDH917471|Mus musculus domesticus DNA, BAC clone: B6Ng01-111A04, 5' end.DH917472|Mus musculus domesticus DNA, BAC clone: B6Ng01-111A04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagtatgcaactccagacagttacctggcaacaaagagatagga
gatagcccagtccactataaaaggagctgcttggcccctcctcccctcct
cactctctttaagctctcacctttcttactcacctttcttactctcatat
ctagctctcctctccctcccttctcccttctctccatttgactggcctct
ctctaccttctctctttctctttgcctttctacaataacgttctaaaacc
atagactgtctctgctcatcaaggactgccatgcttgaatgatggaatag
gctttcccctaaagagccacatataacttccttccagaaggccttcctgc
gctccagccttggatcggatcagaccaaggattctggcctgcatgggaac
cacccagcaccccctctctccctgccctctcttttcttctgccctgggga
tgacagagccagggattactgagacaccctgggactccattttgttctca
gcttttccaaggtgtccagtggtgagacatcagactgcttcttgttcaca
cccgcccccaggcctgagattccatggcttcccacatccagacaaccacc
cagggcctcatagcaagcatgcagtagtcctcccttgtctgcgggcccag
agcatgggaactctggcaggacatgggttttctctcactccctttattcc
cccatgcccagtgcccaacaaggggtcagaaagctttactgtatgggctc
ttcatttagcttaagaggctggaacccagctcccctggtctgaattcagc
tgcacattcttcagctactcatccttccttcttatacaacagcctcttag
agaaagtgaagacttcgattgaggaggccattactcaacacaaagtgttt
acaatgtgatttaccccatagtataccatcaataaaactcagcattagat
actattaactctcttgtatatatctgtccaaatttcctctcataatctct
ggagataggattctcaatggtattgtttttcttctgatcatccttatcta
gcccagatcctaaaaagaactgcatggttccagggcaagcgatgatctga
acacagagtgggctcagccctcttactgcatgctgcctggcttgactact
catagaaaatatctgaggaaaccctttaaggcctgaagcactttctggat
aagaatccgccattctattgctgacgggataggccttggaccgattggag
acagcgcccttctacaaaatgatc
gaattcattacccaacaatatttctcgagcatcataaatagagattactt
tattgaagcattgccataaaataaaaaaaaatattttatgtgcattctaa
aataatcctcacataacctagcaatgtagcttcttttaaactatcacttt
cagatggaatttatgcatcaacagtatttttaaatactttgtctgtcatg
agggagttcattctcttgacagagaattaagatgcttacatatatagcag
aacagatttttaaaatatgatggttccataaagttgacacaattttgata
aaggaacaggtactcttctcactcacattttccctttgaaaattcagctg
tgatgacactgcttctgaaataccctttgtgtacttgataagctctgaca
caagccaggatccttgaggaccagtgtttgctttccacatgacagtgtcc
catggttgaagggttgaaggttgagacttttgtctcaatgtctgaaaaga
tgaacacaatatcaccaggccagaaagtgaatctgtcacttcagtttgac
aatatctttcaacttcatgtgggacatcttcaaaaatgagtggtacattt
gattgttccttagtggttttttttttttgagagtgactgtgtgtgtgtgt
gtgtgtttgtccgtccatgcatgcatgcaactgttaggaaaataactggg
tagacttcaataatagaacaggatgttttgcctcatctaaaactctcagt
cacccaaattaattatttatcctcatttcccattaatctgttttaggaac
aaccttgaccctctttccattatcactcactaatcatatcaatcacattc
aatagataataaatgtcttgacttcacatttaaacttgctgtttcacaca
ctgggagtaagagagagctagtgagtttattactataatattgaaaacac
tttgcacataaaatgctcagacaccctagagcccggatctgctttgcatg
cagctgcagcatgagtatatgtggctagagatgagcagtctccaaaggaa
ctttgaaattttgttctgaaagtaaacattgattttgttatccgaccatg
gcatcctccttcaaataccccact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_98345603_98346756
seq2: B6Ng01-111A04.g_69_1192

seq1  GAATTCATTACCCAACAATATTTCTCGAGCATCATAAATAGAGATTACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTACCCAACAATATTTCTCGAGCATCATAAATAGAGATTACTT  50

seq1  TATTGAAGCATTGCCATAAAATAAAAAAAAATATTTTATGTGCATTCTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAAGCATTGCCATAAAATAAAAAAAAATATTTTATGTGCATTCTAA  100

seq1  AATAATCCTCACATAACCTAGCAATGTAGCTTCTTTTAAACTATCACTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCCTCACATAACCTAGCAATGTAGCTTCTTTTAAACTATCACTTT  150

seq1  CAGATGGAATTTATGCATCAACAGTATTTTTAAATACTTTGTCTGTCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGAATTTATGCATCAACAGTATTTTTAAATACTTTGTCTGTCATG  200

seq1  AGGGAGTTCATTCTCTTGACAGAGAATTAAGATGCTTACATATATAGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGTTCATTCTCTTGACAGAGAATTAAGATGCTTACATATATAGCAG  250

seq1  AACAGATTTTTAAAATATGATGGTTCCATAAAGTTGACACAATTTTGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGATTTTTAAAATATGATGGTTCCATAAAGTTGACACAATTTTGATA  300

seq1  AAGGAACAGGTACTCTTCTCACTCACATTTTCCCTTTGAAAATTCAGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACAGGTACTCTTCTCACTCACATTTTCCCTTTGAAAATTCAGCTG  350

seq1  TGATGACACTGCTTCTGAAATACCCTTTGTGTACTTGATAAGCTCTGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGACACTGCTTCTGAAATACCCTTTGTGTACTTGATAAGCTCTGACA  400

seq1  CAAGCCAGGATCCTTGAGGACCAGTGTTTGCTTTCCACATGACAGTGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCAGGATCCTTGAGGACCAGTGTTTGCTTTCCACATGACAGTGTCC  450

seq1  CATGGTTGAAGGGTTGAAGGTTGAGACTTTTGTCTCAATGTCTGAAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTTGAAGGGTTGAAGGTTGAGACTTTTGTCTCAATGTCTGAAAAGA  500

seq1  TGAACACAATATCACCAGGCCAGAAAGTGAATCTGTCACTTCAGTTTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACACAATATCACCAGGCCAGAAAGTGAATCTGTCACTTCAGTTTGAC  550

seq1  AATATCTTTCAACTTCATGTGGGACATCTTCAAAAATGAGTGGTACATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTTTCAACTTCATGTGGGACATCTTCAAAAATGAGTGGTACATTT  600

seq1  GATTGTTCCTTAGTGGTTTTTTTTTTTTGAGAGTGACTGTGTGTGTGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTTCCTTAGTGGTTTTTTTTTTTTGAGAGTGACTGTGTGTGTGTGT  650

seq1  GTGTGTTTGTCCGTCCATGCATGCATGCAACTGTTAGGAAAATAACTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTTGTCCGTCCATGCATGCATGCAACTGTTAGGAAAATAACTGGG  700

seq1  TAGACTTCAATAATAGAACAGGATGTTTTGCCTCATCTAAAACTCTCAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTTCAATAATAGAACAGGATGTTTTGCCTCATCTAAAACTCTCAGT  750

seq1  CACCCAAATTAATTATTTATCCTCATTTCCCATTAATCTGTTTTAAGGAA  800
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CACCCAAATTAATTATTTATCCTCATTTCCCATTAATCTGTTTT-AGGAA  799

seq1  CAACCTTGACCCTCTTTCCATTATCACTCACTAATCATATCAATCACATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTTGACCCTCTTTCCATTATCACTCACTAATCATATCAATCACATT  849

seq1  CAATAGATAATAAATGTCTTGACTTCACCATTTAAAACTTGCTGTTTCAA  900
      ||||||||||||||||||||||||||| ||||| |||||||||||||| |
seq2  CAATAGATAATAAATGTCTTGACTTCA-CATTT-AAACTTGCTGTTTC-A  896

seq1  CACCACTGGGAGTAAGAGGAGGAGCTAGTGAGTTTAATTAACTAATAAAT  950
      || |||||||||||||||   |||||||||||||||  | ||| ||||  
seq2  CA-CACTGGGAGTAAGAG--AGAGCTAGTGAGTTTA--TTACT-ATAA--  938

seq1  AATTGAAAACCACTTTGCCACATAAAATGCTCAGGACACCCTAAGAGCCC  1000
       |||||||| ||||||| ||||||||||||||| |||||||| |||||||
seq2  TATTGAAAA-CACTTTG-CACATAAAATGCTCA-GACACCCT-AGAGCCC  984

seq1  GGATCTGGCTTTTGCATGCAGCTGCAGCCAATGAGTAATATGT-GCTAGA  1049
      |||||||   ||||||||||||||||||  |||||| |||||| ||||| 
seq2  GGATCTG--CTTTGCATGCAGCTGCAGC--ATGAGT-ATATGTGGCTAG-  1028

seq1  AGATGAAGGGCAGTCTCCAAAGTGACACTTTGATAATTTTGTTCTGATAG  1099
      ||||||   ||||||||||||| || ||||||| ||||||||||||| ||
seq2  AGATGA---GCAGTCTCCAAAG-GA-ACTTTGA-AATTTTGTTCTGAAAG  1072

seq1  TAAAACATTGATTTTGTTTATCAGCACATGGCACTCCT-CATCAAATACA  1148
      | |||||||||||||| ||||| |  ||||||| |||| | |||||||| 
seq2  T-AAACATTGATTTTG-TTATCCGACCATGGCA-TCCTCCTTCAAATAC-  1118

seq1  CCCACT  1154
      ||||||
seq2  CCCACT  1124