BAC Information

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BAC

Clone NameB6Ng01-111I12
Chromosome7 (Build37)
Map Location 54,718,504 - 54,718,911
singlet/doubletsinglet
Overlap genenone
Upstream geneSergef, Tph1, Saal1, Saa3, Saa4, LOC100040106, Saa1, Saa2, Hps5, Gtf2h1, EG668838, EG384622, Ldha, Ldhc, Tsg101, Uevld, C86187, LOC384623, ENSMUSG00000056509, Spty2d1, LOC100040174, Tmem86a, Ptpn5, LOC100041710, Mrgpra6, EG668725, Gm660, Mrgpra1, LOC668846, LOC100040217, LOC668727
Downstream geneMrgpra2, LOC638950, Mrgprc4-ps, LOC677457, EG668729, Mrgpra3, Mrgprc1-ps, LOC100040314, Mrgprc3-ps, EG435977, EG619792, Mrgprc7-ps, Mrgpra18-ps, EG435978, Mrgprc2-ps, Mrgpra4, Mrgprx1, Mrgprb7-ps, Mrgprb12-ps, EG270335, Mrgprb5, Mrgprb4, Mrgprb13, Mrgprb8, Mrgprb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-111I12.bB6Ng01-111I12.g
ACCDH917850DH917851
length739402
definitionDH917850|Mus musculus domesticus DNA, BAC clone: B6Ng01-111I12, 5' end.DH917851|Mus musculus domesticus DNA, BAC clone: B6Ng01-111I12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtttggcagttcctcagaaaagtgaacagagtactaccagagt
attcagcaataccactcctgatcacatacccagaagatatttaaacttgt
aataaggactcatgctccactatgttcatagcagccttatttataatatc
taggagctggaaagaacccagatgtccctcaacagagtaatagatacaga
aaatgtggtacatttacataatggagtactatgcagatattaaaataatg
aatttccatgaaaggggttacagagacaaagtttggagctaagatgaaat
gatggactattcagagactaatccaccgggagatccatgccataatcagc
catcaaacccagacactcttgcatatgccagcaagattttgattgaaggg
acactgatatatctatctcgtatgaggctaggccagtgcctggcaaatac
agaagtggatgcttacagtcatctctaagatggaacagagggcccccaat
ggagaagctagagaaagcacccagaaactgaaggggtctgcaaccctata
catggaacaataatataaactaaccagtacccccagagctcatgtctcta
gcagcatacacagcagaggatggcctagtcaaccatcattgggaagagag
ccccttggttgcaaactttatatgccccaatacaggtgaatgccagggcc
aagaactgtgagtggatgggtaggggagaagtgtggggg
tcagagatatgaccatgtagggaacttggatttcccaagctcaggaatct
gtccaaatggattgccaaaactacacagagatgggaggaatagtagagaa
ctttcccagtgccattacattatacaggctacaggaaccttggctggtca
gaatgcaactttggttggcactcagaacaatgttaattttccttttcaac
tctctcctttctcttttccctctgctcatttgttctgttgcagcacatct
gtgacttccatgtatgaaagcaggtttttttctactctactctctcaatt
ctctttttaatgctactatttctaacacattaaaatgtgtttgtgcatgt
gtgtgcatgtgtgtgcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtat
gt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_54718504_54718911
seq2: B6Ng01-111I12.g_67_474

seq1  GAATTCTCAGAGATATGACCATGTAGGGAACTTGGATTTCCCAAGCTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGAGATATGACCATGTAGGGAACTTGGATTTCCCAAGCTCAG  50

seq1  GAATCTGTCCAAATGGATTGCCAAAACTACACAGAGATGGGAGGAATAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTGTCCAAATGGATTGCCAAAACTACACAGAGATGGGAGGAATAGT  100

seq1  AGAGAACTTTCCCAGTGCCATTACATTATACAGGCTACAGGAACCTTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACTTTCCCAGTGCCATTACATTATACAGGCTACAGGAACCTTGGC  150

seq1  TGGTCAGAATGCAACTTTGGTTGGCACTCAGAACAATGTTAATTTTCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAGAATGCAACTTTGGTTGGCACTCAGAACAATGTTAATTTTCCTT  200

seq1  TTCAACTCTCTCCTTTCTCTTTTCCCTCTGCTCATTTGTTCTGTTGCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTCTCTCCTTTCTCTTTTCCCTCTGCTCATTTGTTCTGTTGCAGC  250

seq1  ACATCTGTGACTTCCATGTATGAAAGCAGGTTTTTTTCTACTCTACTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGTGACTTCCATGTATGAAAGCAGGTTTTTTTCTACTCTACTCTC  300

seq1  TCAATTCTCTTTTTAATGCTACTATTTCTAACACATTAAAATGTGTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTCTCTTTTTAATGCTACTATTTCTAACACATTAAAATGTGTTTGT  350

seq1  GCATGTGTGTGCATGTGTGTGCATGTGTGTGTGTGTGTGTGTGTGTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGTGTGCATGTGTGTGCATGTGTGTGTGTGTGTGTGTGTGTGTGT  400

seq1  GTGTATGT  408
      ||||||||
seq2  GTGTATGT  408