BAC Information

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BAC

Clone NameB6Ng01-111J13
Chromosome7 (Build37)
Map Location 33,439,484 - 33,440,099
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370
Downstream geneLOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962, EG626970, LOC100043859, LOC627004, LOC100043398, LOC100043401, Scgb2b1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-111J13.bB6Ng01-111J13.g
ACCDH917898DH917899
length1,225616
definitionDH917898|Mus musculus domesticus DNA, BAC clone: B6Ng01-111J13, 5' end.DH917899|Mus musculus domesticus DNA, BAC clone: B6Ng01-111J13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcccccacctgatagtcaatcaactgatgtgccaaaaaacggg
tcatcgggccctcggtcccagggccctcaaagatatgggaaccggtttgt
caggacccaggaagcagtcagagaggcgacccaggaagacccacaagggt
ggacctgcgtgccgcctccgacttcctattaatgcctcaaatgagtattc
agccggtgccagtggagcctataccatccttgcccccgggaaccatgggc
cttattctcggccggggttcactcaccttgcagggcttagtagtccaccc
tggagttatagattgtcaacattcccctgaaatacaggtcctgtgctcaa
gccctaaaggcgttttttctattagtaaaggagataggatagctcagctg
ctgctcctccctgataagaccagggaaaaatctgcaggacctgagataaa
gaagatgggctcctcaggaaatgattctgcctatttggttgtatctttaa
ataatagacctaagctctgccttaagatcaacggaaaagagtttgaaggc
atccttgataccggagcagataaaagtataatctctacacattggtggcc
caaagcatggcccaccacagagtcatctcattcattacagggcctaggat
atcaatcatgtcccactataagctccattgccttgacgtgggaatcctct
gaaggacagcaagggaaattcataccttatgtgctcccactcccggttaa
cctctggggaagggatattatgcagcatttgggctttattttgtccaatg
aaacgccccatcgggagggtattcaactaaagcaaaaattatcatggcaa
agatgggttataaggaaggaaaaggttaggacatcaagaacaagggagga
tagaggcccatctcacctaatggaaaccaagacagacagggtcttgggtt
ttccttagcggccattggggcagcacgacccatacatggaaaacaggacc
cagtgtgggtctcatggcactatcttctgaaactagaggctgtgatcact
tgtgagacatttaattaggcatattgacctctacctcaccttggatatct
ccaattttgatagaaggtcagaattggaagctgtctcatgacctaaccat
aagagcatgacctattgccatacaaggctcctgtacttgcgctttaccgg
tgcgtgaaattaattattatgacat
gaattcctcttaaaagcatgggaccctgatgactacctgtgctgcagatc
ctccacagcatggacaggaagatgagcctttctggcactctgccatgatg
agtctccaggccttagtgtagtctccaaagactgtacaattgcttagacc
acttctggcaattgaggtctaattatcctgtcctctggataccttgtgtt
cttcttcagaatctgcctctgccctctcttcattctatgaccctacctac
tctctcctgcatttcccccatcaaatgcttaagctaccatagagcagtaa
gactcttggcctacttcacagctcatcctgctgacccttcagcctttaca
agtctgcctcaggctttgctctgctgtcttaagcctcctccattgttatt
tgttcagtccacacttcctaaagaaggacaaaagagctgtcaaaagaaac
ctttcatgaagaaaatggcattcctaaaatggcaatgccagagtggccag
tgtatgtcctttctgagtgaatgagcttaagcagtctgcttccaagatgg
gtggagcagggggcctaccacaaccttgactcttagcacccttcccaaca
gtcgtcttatgtcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_33439484_33440099
seq2: B6Ng01-111J13.g_69_684

seq1  GAATTCCTCTTAAAAGCATGGGACCCTGATGACTACCTGTGCTGCAGATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTTAAAAGCATGGGACCCTGATGACTACCTGTGCTGCAGATC  50

seq1  CTCCACAGCATGGACAGGAAGATGAGCCTTTCTGGCACTCTGCCATGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACAGCATGGACAGGAAGATGAGCCTTTCTGGCACTCTGCCATGATG  100

seq1  AGTCTCCAGGCCTTAGTGTAGTCTCCAAAGACTGTACAATTGCTTAGACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCCAGGCCTTAGTGTAGTCTCCAAAGACTGTACAATTGCTTAGACC  150

seq1  ACTTCTGGCAATTGAGGTCTAATTATCCTGTCCTCTGGATACCTTGTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGGCAATTGAGGTCTAATTATCCTGTCCTCTGGATACCTTGTGTT  200

seq1  CTTCTTCAGAATCTGCCTCTGCCCTCTCTTCATTCTATGACCCTACCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCAGAATCTGCCTCTGCCCTCTCTTCATTCTATGACCCTACCTAC  250

seq1  TCTCTCCTGCATTTCCCCCATCAAATGCTTAAGCTACCATAGAGCAGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCTGCATTTCCCCCATCAAATGCTTAAGCTACCATAGAGCAGTAA  300

seq1  GACTCTTGGCCTACTTCACAGCTCATCCTGCTGACCCTTCAGCCTTTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTTGGCCTACTTCACAGCTCATCCTGCTGACCCTTCAGCCTTTACA  350

seq1  AGTCTGCCTCAGGCTTTGCTCTGCTGTCTTAAGCCTCCTCCATTGTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGCCTCAGGCTTTGCTCTGCTGTCTTAAGCCTCCTCCATTGTTATT  400

seq1  TGTTCAGTCCACACTTCCTAAAGAAGGACAAAAGAGCTGTCAAAAGAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGTCCACACTTCCTAAAGAAGGACAAAAGAGCTGTCAAAAGAAAC  450

seq1  CTTTCATGAAGAAAATGGCATTCCTAAAATGGCAATGCCAGAGTGGCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATGAAGAAAATGGCATTCCTAAAATGGCAATGCCAGAGTGGCCAG  500

seq1  TGTATGTCCTTTCTGAGTGAATGAGCTTAAGCAGTCTGCTTCCAAGATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTCCTTTCTGAGTGAATGAGCTTAAGCAGTCTGCTTCCAAGATGG  550

seq1  GTGGAGCAGGGGGCCTACCACAACCTTGACTCTTAGCACCCTTCCCAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGCAGGGGGCCTACCACAACCTTGACTCTTAGCACCCTTCCCAACA  600

seq1  GTCGCCTTATGTCACT  616
      |||| |||||||||||
seq2  GTCGTCTTATGTCACT  616