BAC Information

Click to search

BAC

Clone NameB6Ng01-111J22
Chromosome7 (Build37)
Map Location 99,120,859 - 99,328,634
singlet/doubletdoublet
Overlap geneDlg2
Upstream genenone
Downstream geneCcdc90b, Ankrd42, Pcf11, LOC676240, LOC100040007, 4632427E13Rik, Rab30, 4632434I11Rik, Prcp, A830059I20Rik, LOC100040298
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-111J22.bB6Ng01-111J22.g
ACCDH917916DH917917
length1,0911,154
definitionDH917916|Mus musculus domesticus DNA, BAC clone: B6Ng01-111J22, 5' end.DH917917|Mus musculus domesticus DNA, BAC clone: B6Ng01-111J22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,327,530 - 99,328,634)(99,120,859 - 99,122,022)
sequence
gaattcaaaagagaggaaagtggatcttcactcatttcttccattttgtg
tgggaaaaccgctcgtcaccaaactaaaagaacacatcaaactgagattt
taattcaccctcttccttcagtttgaagtaggccagccaatgccagctca
agaccccgttgttccaagcttttctccgtatttattgtttttccttccta
aaagcattttcaaccatgctttataaggaattcttgttttgattgtacag
tttattcattttctgaagtctagggtagtcatacaacgactcctccccca
caaccacccctaacaccacacacacacacacacacacacacacacacaca
cacacacacacacacacacacacactgatcgctggtgcaatccagctgaa
tgtggctctgttttcttgccctctctgttgctactcaaatcagatgttgt
ggtcaccatggtgacaccacccacctgttctcccttttttatttataaaa
cttaaagtggactgtgtctgtgattttttttttaaagtgaaaactgaaac
agtttaatcaaacttctctgacaaatgaagtaatttcatgtaaatagttt
attttagaaaattctaaatgtgttactttagacatgatctatcagaaaaa
cacaactgaagattagaatctgcttaatactcagggactaaaaatcccaa
gggttcttgggggataaaaataaggtttagtttctactaaccaaatagct
gtaatgatggggtccctggctctagaagtcatgccctccccactgcctct
ccttccattccctttcctcttccactgggaccctccttctcaaaaagtcc
tgctcctctgtgcatgtcttcttttggacttgaccaagcctggggggtag
gttatctactgcagcaagagcacacttgtttgtggagttcttttctctgg
tattcttttctcttggtttttggtggactcaaacctggggtggctgtagg
tgtatgatttagagctagatctttatttcaatgatcaatagtctggtgtt
gtgccagtaccagctattcataatgtcaactgatatcagtt
gaattcaatcactgctgtattatatcgagcattatcagatccctgatgcc
acaggaggccttcaggaagcatttataagtaactttgaggtttgtataga
cgccatagcaacagccataacatcaaatgaaattttaaataagatgtgac
catgagtctgaacttaaaaatatataagtattggtcataatttgaaaatc
agacatttgcagtatgtagatagcttgtaaagatttaaagaggaatataa
actaaaactacatttatatacacatatgtatctgggctatatgatttcca
ggtgatactcttgatgttacaaataacaacaaaaactaaaagaaattaag
aaaatgccttattgtcatacacaagaaccagagtaagaattctaatcaac
ctgcccttaaaagtctcttgctcacatctacacctttccactcagagatg
attttgtggcttgtagtcttggccctgccattcaacacctacgcaattct
tcaagtcacttagtctctgtaagtcttgaattccttgcctctagatttgg
gggtaaatgatctttttatttcttcaaggcactataaggtttttaatata
ataataagtaaagaatattatgtttatttttagaagattacatgtatttg
atgccacctttgagctgtatactatatttgaggacttgctacattcattt
aaagtaacaaatcaaggattcagtctctagtggtgagagtttagcaagca
gagaagcatttccataaaaggagaatccttcaactacctctcaagtccca
tcaagctggaaagatctgattacaggtgccacttgtactcctcagtctga
cgtaggagcattgctctagtgctctgatctatactccctctgctttgagt
agatagtaaacatttttagcagtttgactaggatatgcaccatgacttag
tctatctctttcttattagattagaaattggttttattccaccaattcat
agctagggaaggtaaaaaagcagtcttgcatggaaaatgcctttgcttgg
agccactggagaccttatagagtaatttactgtggaggagaattggtttg
tcagcgtgcttaataggctcactgtgtggattcagtactgggagactaaa
caag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_99327530_99328634
seq2: B6Ng01-111J22.b_50_1140 (reverse)

seq1  AACTGATACTCAGTTTGACATTAATAGAAATAGCTTGGTACTGGCACAAC  50
      |||||||| |||| |||||||   ||  |||||| |||||||||||||||
seq2  AACTGATA-TCAG-TTGACAT---TATGAATAGC-TGGTACTGGCACAAC  44

seq1  ACCAGACCTATTGATCAATGGAATAAAGATCTAGCTCTAAATTCATACAC  100
      |||||| |||||||||| || |||||||||||||||||||| ||||||||
seq2  ACCAGA-CTATTGATCATTGAAATAAAGATCTAGCTCTAAA-TCATACAC  92

seq1  CTACAGCCACCCAAGTTTTGAGTCCAACCAAAAAACCAAGAGAAAAGAAT  150
      |||||||||||| || ||||||||||  | ||||||||||||||||||||
seq2  CTACAGCCACCCCAGGTTTGAGTCCA--CCAAAAACCAAGAGAAAAGAAT  140

seq1  ACCAGAGAAAAGAACCTCCAACAAACAAGTGGTTGCTCTTGCTGCAGTAG  200
      |||||||||||||| |||| |||||||||||  |||||||||||||||||
seq2  ACCAGAGAAAAGAA-CTCC-ACAAACAAGTG--TGCTCTTGCTGCAGTAG  186

seq1  ATAACCTACCCCCCAGGCTTGGTCAAGTCCAAAAGAAGACATGCACAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCTACCCCCCAGGCTTGGTCAAGTCCAAAAGAAGACATGCACAGAG  236

seq1  GAGCAGGACTTTTTGAGAAGGAGGGTCCCAGTGGAAGAGGAAAGGGAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGGACTTTTTGAGAAGGAGGGTCCCAGTGGAAGAGGAAAGGGAATG  286

seq1  GAAGGAGAGGCAGTGGGGAGGGCATGACTTCTAGAGCCAGGGACCCCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGAGGCAGTGGGGAGGGCATGACTTCTAGAGCCAGGGACCCCATC  336

seq1  ATTACAGCTATTTGGTTAGTAGAAACTAAACCTTATTTTTATCCCCCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGCTATTTGGTTAGTAGAAACTAAACCTTATTTTTATCCCCCAAG  386

seq1  AACCCTTGGGATTTTTAGTCCCTGAGTATTAAGCAGATTCTAATCTTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTTGGGATTTTTAGTCCCTGAGTATTAAGCAGATTCTAATCTTCAG  436

seq1  TTGTGTTTTTCTGATAGATCATGTCTAAAGTAACACATTTAGAATTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTTTTCTGATAGATCATGTCTAAAGTAACACATTTAGAATTTTCT  486

seq1  AAAATAAACTATTTACATGAAATTACTTCATTTGTCAGAGAAGTTTGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAACTATTTACATGAAATTACTTCATTTGTCAGAGAAGTTTGATT  536

seq1  AAACTGTTTCAGTTTTCACTTTAAAAAAAAAATCACAGACACAGTCCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTTTCAGTTTTCACTTTAAAAAAAAAATCACAGACACAGTCCACT  586

seq1  TTAAGTTTTATAAATAAAAAAGGGAGAACAGGTGGGTGGTGTCACCATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTTTATAAATAAAAAAGGGAGAACAGGTGGGTGGTGTCACCATGG  636

seq1  TGACCACAACATCTGATTTGAGTAGCAACAGAGAGGGCAAGAAAACAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCACAACATCTGATTTGAGTAGCAACAGAGAGGGCAAGAAAACAGAG  686

seq1  CCACATTCAGCTGGATTGCACCAGCGATCAGTGTGTGTGTGTGTGTGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTCAGCTGGATTGCACCAGCGATCAGTGTGTGTGTGTGTGTGTGT  736

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTTAGGGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTTAGGGGT  786

seq1  GGTTGTGGGGGAGGAGTCGTTGTATGACTACCCTAGACTTCAGAAAATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTGGGGGAGGAGTCGTTGTATGACTACCCTAGACTTCAGAAAATGA  836

seq1  ATAAACTGTACAATCAAAACAAGAATTCCTTATAAAGCATGGTTGAAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACTGTACAATCAAAACAAGAATTCCTTATAAAGCATGGTTGAAAAT  886

seq1  GCTTTTAGGAAGGAAAAACAATAAATACGGAGAAAAGCTTGGAACAACGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTAGGAAGGAAAAACAATAAATACGGAGAAAAGCTTGGAACAACGG  936

seq1  GGTCTTGAGCTGGCATTGGCTGGCCTACTTCAAACTGAAGGAAGAGGGTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTGAGCTGGCATTGGCTGGCCTACTTCAAACTGAAGGAAGAGGGTG  986

seq1  AATTAAAATCTCAGTTTGATGTGTTCTTTTAGTTTGGTGACGAGCGGTTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAATCTCAGTTTGATGTGTTCTTTTAGTTTGGTGACGAGCGGTTT  1036

seq1  TCCCACACAAAATGGAAGAAATGAGTGAAGATCCACTTTCCTCTCTTTTG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACACAAAATGGAAGAAATGAGTGAAGATCCACTTTCCTCTCTTTTG  1086

seq1  AATTC  1105
      |||||
seq2  AATTC  1091

seq1: chr7_99120859_99122022
seq2: B6Ng01-111J22.g_67_1220

seq1  GAATTCAATCACTGCTGTATTATATCGAGCATTATCAGATCCCTGATGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCACTGCTGTATTATATCGAGCATTATCAGATCCCTGATGCC  50

seq1  ACAGGAGGCCTTCAGGAAGCATTTATAAGTAACTTTGAGGTTTGTATAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGGCCTTCAGGAAGCATTTATAAGTAACTTTGAGGTTTGTATAGA  100

seq1  CGCCATAGCAACAGCCATAACATCAAATGAAATTTTAAATAAGATGTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCATAGCAACAGCCATAACATCAAATGAAATTTTAAATAAGATGTGAC  150

seq1  CATGAGTCTGAACTTAAAAATATATAAGTATTGGTCATAATTTGAAAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGTCTGAACTTAAAAATATATAAGTATTGGTCATAATTTGAAAATC  200

seq1  AGACATTTGCAGTATGTAGATAGCTTGTAAAGATTTAAAGAGGAATATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTTGCAGTATGTAGATAGCTTGTAAAGATTTAAAGAGGAATATAA  250

seq1  ACTAAAACTACATTTATATACACATATGTATCTGGGCTATATGATTTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAACTACATTTATATACACATATGTATCTGGGCTATATGATTTCCA  300

seq1  GGTGATACTCTTGATGTTACAAATAACAACAAAAACTAAAAGAAATTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATACTCTTGATGTTACAAATAACAACAAAAACTAAAAGAAATTAAG  350

seq1  AAAATGCCTTATTGTCATACACAAGAACCAGAGTAAGAATTCTAATCAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCCTTATTGTCATACACAAGAACCAGAGTAAGAATTCTAATCAAC  400

seq1  CTGCCCTTAAAAGTCTCTTGCTCACATCTACACCTTTCCACTCAGAGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTTAAAAGTCTCTTGCTCACATCTACACCTTTCCACTCAGAGATG  450

seq1  ATTTTGTGGCTTGTAGTCTTGGCCCTGCCATTCAACACCTACGCAATTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTGGCTTGTAGTCTTGGCCCTGCCATTCAACACCTACGCAATTCT  500

seq1  TCAAGTCACTTAGTCTCTGTAAGTCTTGAATTCCTTGCCTCTAGATTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTCACTTAGTCTCTGTAAGTCTTGAATTCCTTGCCTCTAGATTTGG  550

seq1  GGGTAAATGATCTTTTTATTTCTTCAAGGCACTATAAGGTTTTTAATATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAATGATCTTTTTATTTCTTCAAGGCACTATAAGGTTTTTAATATA  600

seq1  ATAATAAGTAAAGAATATTATGTTTATTTTTAGAAGATTACATGTATTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAGTAAAGAATATTATGTTTATTTTTAGAAGATTACATGTATTTG  650

seq1  ATGCCACCTTTGAGCTGTATACTATATTTGAGGACTTGCTACATTCATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCACCTTTGAGCTGTATACTATATTTGAGGACTTGCTACATTCATTT  700

seq1  AAAGTAACAAATCAAGGATTCAGTCTCTAGTGGTGAGAGTTTAGCAAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAACAAATCAAGGATTCAGTCTCTAGTGGTGAGAGTTTAGCAAGCA  750

seq1  GAGAAGCATTTCCATAAAAGGAGAATCCTTCAACTACCTCTCAAGTCCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCATTTCCATAAAAGGAGAATCCTTCAACTACCTCTCAAGTCCCA  800

seq1  TCAAGCTGGAAAGATCTGATTACAGGTGCCACTTGTACTCCTCAGTCTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCTGGAAAGATCTGATTACAGGTGCCACTTGTACTCCTCAGTCTGA  850

seq1  CGTAAGGAGCATTGCTCTAGTGCTCTGATCTATACTCCCTCTGCTTTGAG  900
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGT-AGGAGCATTGCTCTAGTGCTCTGATCTATACTCCCTCTGCTTTGAG  899

seq1  TAGATAGTAAACATTTTTAAGCAGTTTTGACTAGGATAATGCAACCATGA  950
      |||||||||||||||||| ||||| |||||||||||| |||| |||||||
seq2  TAGATAGTAAACATTTTT-AGCAG-TTTGACTAGGAT-ATGC-ACCATGA  945

seq1  CTTAGTCTATCTCTTTCTTATTAGATTTAGAAATTGGTTTTTATCCACCA  1000
      ||||||||||||||||||||||||| |||||||||||||||  |||||||
seq2  CTTAGTCTATCTCTTTCTTATTAGA-TTAGAAATTGGTTTTATTCCACCA  994

seq1  ATTCATAGCTAGGGAAGGTAAATAAAGCAGTCTTGCAT-GAAAATGCC-T  1048
      |||||||||||||||||||||| ||||||||||||||| ||||||||| |
seq2  ATTCATAGCTAGGGAAGGTAAA-AAAGCAGTCTTGCATGGAAAATGCCTT  1043

seq1  TGCTAGAAAGCCACT-GAGACCCTATAGAGTATATTCACTGTGATGAAGA  1097
      |||| |  ||||||| |||||| ||||||||| ||| ||||||  | || 
seq2  TGCTTG-GAGCCACTGGAGACCTTATAGAGTA-ATTTACTGTGGAGGAG-  1090

seq1  AATCTGTTTGTCAGC-TGCATAAAATAGCTCACTGT-TGTAATCCAAGTA  1145
      |||  |||||||||| ||| ||| |  ||||||||| || | ||  ||||
seq2  AATTGGTTTGTCAGCGTGCTTAATA-GGCTCACTGTGTGGATTC--AGTA  1137

seq1  CCTGGGAGACTAAAACAAG  1164
       |||||||||| |||||||
seq2  -CTGGGAGACT-AAACAAG  1154