BAC Information

Click to search

BAC

Clone NameB6Ng01-112B14
Chromosome7 (Build37)
Map Location 59,595,994 - 59,670,650
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC668779, Tmem16e, Slc17a6, EG620599, LOC654473, LOC100040608, Gas2, 1700015G11Rik, EG668783
Downstream geneEG620782, LOC100040692, Gm1865, LOC100040718
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112B14.bB6Ng01-112B14.g
ACCDH918258DH918259
length1,1321,128
definitionDH918258|Mus musculus domesticus DNA, BAC clone: B6Ng01-112B14, 5' end.DH918259|Mus musculus domesticus DNA, BAC clone: B6Ng01-112B14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,595,994 - 59,597,137)(59,669,505 - 59,670,650)
sequence
gaattccttttctaactatgcaggctttcctactttggaggcgcaggcac
cttctaattttaattctaaccttaaacttcctatcaactatcttgacctc
ttaaaattatttgaatcaaatcaggaattccgtgtaaaaatcttgatcag
aaattataaaaccatgaatatatctaaacaacattatttcgtggaagtta
acattcatgttgatctgcaggagatttgctcaatatgataggctagttcc
caggaatcggtcataacagactgcgggcagaaagggtctttctttgctca
gtcacatcatgtgagaaaaatgagggatacagagacgaacaatatgagaa
gctgtattagcagcaagaagaaaccctgggacgaagcttctggagccttg
catttttaggattcacctattgcagcaatgcaaagcaatgcaacctgtct
aggaagttcacgggactactgcagatcctcctgtagggtatgtgctattc
tgcaaagcaatattgttcttgctactgttttaaggggaaatatttgttct
tgagatagaggatcgggtaacatagactttgccttgagctctccatgtag
ctaatggtggccttgaagtcttgatgtgttctctatctcccaaatactta
aatcccaggattttaccaccatacttaggtaaagggaagttggacctgag
aactttttattgaatgaacaaaattgactactttttgtagggatatggct
cggaagcttggggaggcaggacaggagaagttgactgtgcttgccccact
ctgtcactgggcagatgttgggccatacggaagccatgggatactactcc
tgtggtgggaaagcatagactgaagtgcaaaacaaccgaagctgacttag
aggtccctgggccctacatgaggctggggctgtctgggtctcagcacttg
gacacccaggcactgctgggatcgttggagagctaagatagagtggggtt
cacaggtgcatgtagcctggggccagggtgggggagagagctccaactgg
tccttcagagaagtcttggctgtggcaggtttgcactggtcttgatttgg
tggccatgcttggaagaaacagagaagcttct
gaattctctccttggatctgtaccccatttctaattgtattatttgtatt
gattgtattatttggttggttgatgtctagtttcttgagttatttgtata
ctgtggatattagccatctgtcaaatgtggagttgtgctgcatgtcttta
atcccagcactgaggtaggcagatctctgagtttgaggccagtctggtca
acaaagcattttctgaaaccctgtctcagaaagaaaaatagcaaagggac
cattttatgataaaataattttagtattgattttctgtcttgtgaaattc
ttgtcgttaaagtgcttagaccaataaaacagtctcaatgccaatttcag
aagataggttttgcatatatgacacctttctttattaatgaagggtttat
tctaatcatgtctgtacccatgggattagtgatgcaactactaatttttc
tgttgtattttatatcatttcagcccacccccaccccaggagtattcccc
tgaacaaggtattcgccactccatttacactacagagcatttaacaagct
cctctattcccttacaaacatcagttgtgaggaatccagaaaacatgttt
acatttcattaagatgaattagaggaagtactaagccagggcaagggaat
tccaggaaggaggggatagttaagtggaaagaactcaggcataaatcagc
ttgatggtgctcaaggagacctgagcttctgtctatgcaaatgggtcatt
ccttgctcatgtttattttattattgaaaacatttttatatcaagattca
ttgaattactttaaatttttggagcacacagacatgcagttctgagtaaa
aaaaaaatcttgaaaatgagataatatagtatgtcaatcagttgaagtaa
aaacatctgggctacataagacactcagcaatttctcttcattgttgaat
aaaactcctgatacctggactctattttttcccatgctacacccagatgg
gtgcatgcttcgttagcaatcagttgtgagaagaaacttgtttgtgtgtt
gctttgcaaacatcatatctgctaaagaatagttagagagtgattttcat
gctgtgtacagcagctcggatcctaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_59595994_59597137
seq2: B6Ng01-112B14.b_45_1176

seq1  GAATTCCTTTTCTAACTATGCAGGCTTTCCTACTTTGGAGGCGCAGGCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTTCTAACTATGCAGGCTTTCCTACTTTGGAGGCGCAGGCAC  50

seq1  CTTCTAATTTTAATTCTAACCTTAAACTTCCTATCAACTATCTTGACCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAATTTTAATTCTAACCTTAAACTTCCTATCAACTATCTTGACCTC  100

seq1  TTAAAATTATTTGAATCAAATCAGGAATTCCGTGTAAAAATCTTGATCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTATTTGAATCAAATCAGGAATTCCGTGTAAAAATCTTGATCAG  150

seq1  AAATTATAAAACCATGAATATATCTAAACAACATTATTTCGTGGAAGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATAAAACCATGAATATATCTAAACAACATTATTTCGTGGAAGTTA  200

seq1  ACATTCATGTTGATCTGCAGGAGATTTGCTCAATATGATAGGCTAGTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCATGTTGATCTGCAGGAGATTTGCTCAATATGATAGGCTAGTTCC  250

seq1  CAGGAATCGGTCATAACAGACTGCGGGCAGAAAGGGTCTTTCTTTGCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATCGGTCATAACAGACTGCGGGCAGAAAGGGTCTTTCTTTGCTCA  300

seq1  GTCACATCATGTGAGAAAAATGAGGGATACAGAGACGAACAATATGAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACATCATGTGAGAAAAATGAGGGATACAGAGACGAACAATATGAGAA  350

seq1  GCTGTATTAGCAGCAAGAAGAAACCCTGGGACGAAGCTTCTGGAGCCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTATTAGCAGCAAGAAGAAACCCTGGGACGAAGCTTCTGGAGCCTTG  400

seq1  CATTTTTAGGATTCACCTATTGCAGCAATGCAAAGCAATGCAACCTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTAGGATTCACCTATTGCAGCAATGCAAAGCAATGCAACCTGTCT  450

seq1  AGGAAGTTCACGGGACTACTGCAGATCCTCCTGTAGGGTATGTGCTATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTTCACGGGACTACTGCAGATCCTCCTGTAGGGTATGTGCTATTC  500

seq1  TGCAAAGCAATATTGTTCTTGCTACTGTTTTAAGGGGAAATATTTGTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAGCAATATTGTTCTTGCTACTGTTTTAAGGGGAAATATTTGTTCT  550

seq1  TGAGATAGAGGATCGGGTAACATAGACTTTGCCTTGAGCTCTCCATGTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATAGAGGATCGGGTAACATAGACTTTGCCTTGAGCTCTCCATGTAG  600

seq1  CTAATGGTGGCCTTGAAGTCTTGATGTGTTCTCTATCTCCCAAATACTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGGTGGCCTTGAAGTCTTGATGTGTTCTCTATCTCCCAAATACTTA  650

seq1  AATCCCAGGATTTTACCACCATACTTAGGTAAAGGGAAGTTGGACCTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCAGGATTTTACCACCATACTTAGGTAAAGGGAAGTTGGACCTGAG  700

seq1  AACTTTTTATTGAATGAACAAAATTGACTACTTTTTGTAGGGATATGGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTTATTGAATGAACAAAATTGACTACTTTTTGTAGGGATATGGCT  750

seq1  CGGAAGCTTGGGGAGGCAGGACAGGAGAAGTTGACTGTGCTTGCCCCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAGCTTGGGGAGGCAGGACAGGAGAAGTTGACTGTGCTTGCCCCACT  800

seq1  CTGTCACTGGGCAGATGTTGGGCCATACGGAAGCCATGGGATACTACTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCACTGGGCAGATGTTGGGCCATACGGAAGCCATGGGATACTACTCC  850

seq1  TGTGGTGGGAAAGCATAGACTGAAGTGCAAAACAACCGAAGCTGACTTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGGGAAAGCATAGACTGAAGTGCAAAACAACCGAAGCTGACTTAG  900

seq1  AGGTCCCTGGGCCCTACATGAGGCTGGGGCTGTCTGGGTCTCAGGCACTT  950
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGGTCCCTGGGCCCTACATGAGGCTGGGGCTGTCTGGGTCTCA-GCACTT  949

seq1  GGACACCCAGGCACTGCTGGGATCGGTTGGAGAGCTAAGGATAGAGTGGG  1000
      |||||||||||||||||||||||| ||||||||||||| |||||||||||
seq2  GGACACCCAGGCACTGCTGGGATC-GTTGGAGAGCTAA-GATAGAGTGGG  997

seq1  GTTCACAGGGTGCATGTAGCCTGGGGCCAGGGTGGGGGAAGGAGGGAGCT  1050
      ||||||| ||||||||||||||||||||||||||||    |||| |||||
seq2  GTTCACA-GGTGCATGTAGCCTGGGGCCAGGGTGGG----GGAGAGAGCT  1042

seq1  CCAACTGGTCCTTCAGGGAGAGTTCTTGGCTGGTGGCAGGTTTGCACTTG  1100
      |||||||||||||||  ||||  |||||||| ||||||||||||||| ||
seq2  CCAACTGGTCCTTCA--GAGAAGTCTTGGCT-GTGGCAGGTTTGCAC-TG  1088

seq1  GTCTTGATTTGGTGGCCATGGCTGGGAG-AACAGAGAAGCCTTCT  1144
      ||||||||||||||||||||  ||| || |||||||||| |||||
seq2  GTCTTGATTTGGTGGCCATGCTTGGAAGAAACAGAGAAG-CTTCT  1132

seq1: chr7_59669505_59670650
seq2: B6Ng01-112B14.g_70_1197 (reverse)

seq1  CCTTAGGATTCTGAGCTGCCTGGTACACAGACATTGAAAATCACTCCTCT  50
      |||||||| || |||||||   |||||||| || ||||||||||| ||||
seq2  CCTTAGGA-TCCGAGCTGC--TGTACACAG-CA-TGAAAATCACT-CTCT  44

seq1  AGATTATCTTTTAAGCAAGGATATGATGTTTTGCCAAAAGCAACACACAA  100
      |  |  |||||  ||||  ||||||||| |||||  ||||||||||||||
seq2  AACTATTCTTT--AGCA--GATATGATG-TTTGC--AAAGCAACACACAA  87

seq1  ACAAGTTTCTTTCTCACAACTGATTTGCTAACGGAGCATGCACCCATCTG  150
      ||||||||| ||||||||||||| ||||||||| ||||||||||||||||
seq2  ACAAGTTTC-TTCTCACAACTGA-TTGCTAACGAAGCATGCACCCATCTG  135

seq1  GGTTGTAGCATGGGGAAAAAATAGAGTCCAGGTATCAGGAGTTTTATTCA  200
      || |||||||| ||||||||||||||||||||||||||||||||||||| 
seq2  GG-TGTAGCAT-GGGAAAAAATAGAGTCCAGGTATCAGGAGTTTTATTC-  182

seq1  AACAATGAAGAGAAATTGCTGAGTGTCTTATGTAGCCCAGATGTTTTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGAAGAGAAATTGCTGAGTGTCTTATGTAGCCCAGATGTTTTTAC  232

seq1  TTCAACTGATTGACATACTATATTATCTCATTTTCAAGATTTTTTTTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTGATTGACATACTATATTATCTCATTTTCAAGATTTTTTTTTTA  282

seq1  CTCAGAACTGCATGTCTGTGTGCTCCAAAAATTTAAAGTAATTCAATGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAACTGCATGTCTGTGTGCTCCAAAAATTTAAAGTAATTCAATGAA  332

seq1  TCTTGATATAAAAATGTTTTCAATAATAAAATAAACATGAGCAAGGAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGATATAAAAATGTTTTCAATAATAAAATAAACATGAGCAAGGAATG  382

seq1  ACCCATTTGCATAGACAGAAGCTCAGGTCTCCTTGAGCACCATCAAGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTTGCATAGACAGAAGCTCAGGTCTCCTTGAGCACCATCAAGCTG  432

seq1  ATTTATGCCTGAGTTCTTTCCACTTAACTATCCCCTCCTTCCTGGAATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGCCTGAGTTCTTTCCACTTAACTATCCCCTCCTTCCTGGAATTC  482

seq1  CCTTGCCCTGGCTTAGTACTTCCTCTAATTCATCTTAATGAAATGTAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCCCTGGCTTAGTACTTCCTCTAATTCATCTTAATGAAATGTAAAC  532

seq1  ATGTTTTCTGGATTCCTCACAACTGATGTTTGTAAGGGAATAGAGGAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTCTGGATTCCTCACAACTGATGTTTGTAAGGGAATAGAGGAGCT  582

seq1  TGTTAAATGCTCTGTAGTGTAAATGGAGTGGCGAATACCTTGTTCAGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAATGCTCTGTAGTGTAAATGGAGTGGCGAATACCTTGTTCAGGGG  632

seq1  AATACTCCTGGGGTGGGGGTGGGCTGAAATGATATAAAATACAACAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTCCTGGGGTGGGGGTGGGCTGAAATGATATAAAATACAACAGAAA  682

seq1  AATTAGTAGTTGCATCACTAATCCCATGGGTACAGACATGATTAGAATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTAGTTGCATCACTAATCCCATGGGTACAGACATGATTAGAATAA  732

seq1  ACCCTTCATTAATAAAGAAAGGTGTCATATATGCAAAACCTATCTTCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTCATTAATAAAGAAAGGTGTCATATATGCAAAACCTATCTTCTGA  782

seq1  AATTGGCATTGAGACTGTTTTATTGGTCTAAGCACTTTAACGACAAGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGCATTGAGACTGTTTTATTGGTCTAAGCACTTTAACGACAAGAAT  832

seq1  TTCACAAGACAGAAAATCAATACTAAAATTATTTTATCATAAAATGGTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAAGACAGAAAATCAATACTAAAATTATTTTATCATAAAATGGTCC  882

seq1  CTTTGCTATTTTTCTTTCTGAGACAGGGTTTCAGAAAATGCTTTGTTGAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTATTTTTCTTTCTGAGACAGGGTTTCAGAAAATGCTTTGTTGAC  932

seq1  CAGACTGGCCTCAAACTCAGAGATCTGCCTACCTCAGTGCTGGGATTAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTGGCCTCAAACTCAGAGATCTGCCTACCTCAGTGCTGGGATTAAA  982

seq1  GACATGCAGCACAACTCCACATTTGACAGATGGCTAATATCCACAGTATA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGCAGCACAACTCCACATTTGACAGATGGCTAATATCCACAGTATA  1032

seq1  CAAATAACTCAAGAAACTAGACATCAACCAACCAAATAATACAATCAATA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAACTCAAGAAACTAGACATCAACCAACCAAATAATACAATCAATA  1082

seq1  CAAATAATACAATTAGAAATGGGGTACAGATCCAAGGAGAGAATTC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAATACAATTAGAAATGGGGTACAGATCCAAGGAGAGAATTC  1128