BAC Information

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BAC

Clone NameB6Ng01-112E06
Chromosome7 (Build37)
Map Location 75,868,621 - 76,029,546
singlet/doubletdoublet
Overlap geneArrdc4
Upstream geneTtc23, Dmn, LOC665319, LOC100041771, Igf1r, C330024D12Rik, EG434197, LOC100041800, EG384639
Downstream geneLOC384741, EG665410
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112E06.bB6Ng01-112E06.g
ACCDH918373DH918374
length1,1161,049
definitionDH918373|Mus musculus domesticus DNA, BAC clone: B6Ng01-112E06, 5' end.DH918374|Mus musculus domesticus DNA, BAC clone: B6Ng01-112E06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,028,422 - 76,029,546)(75,868,621 - 75,869,517)
sequence
gaattctccctcaactttcatcagggaagagtgagtcagttacatgagga
aatgagctgagagaagcagatcaggttttgttgccttcaaggtgtgtttt
gctgtgaaacttttggtatttcctgttcagtgaatagatactgattttag
ttaacaaaagcggcttgtgcgtatgaacgctgggcttaaacctctggaga
aaacctcaggacttgtgtcatgtatatttaataagaactattagaaccag
tttttataaccatatccaggctagtcatgcaatcggacacactctagggg
gaactgcacctttagcacactatgtttggcctcttgacttcttcattctg
agaatggcaccaggaaccagagaacactgtaacactccatactgtacaat
tccaatcagatctgagtgataccacatactagtttaagcaccacttggca
ctgtgaatgtctgataaatgaaagatagaggaggattacacctggtggta
tggaaaatgaaagaaaaaaaaaactcccttgattaaaattcagcaccttt
aaccttccactgagctgttaaataccagcaggtttcagcccattatggaa
atgaagcccccttcaaacagagtcattttaactgggtgttagaaagaata
ttatccattcaagaagctgagcgtgggttgccaggaataaaatatgaaca
gtgggacgacttcagagggctctgggacacacggagatgactgcagatgt
tggtcagtgaggcagtatagaagctagcaggggtgatagcataaccccag
aggctttgcacatctttaatgaacaaaatgtattatacccaggagtccca
aatcaattacttatctatccacttctcaagttgactcttctaaatatttt
cctgttgcagaaatacctgaatctgttaaagcctgcttagcacctgtgaa
cagcttggggagtggggacagggggcactgattcagccatcagagaggaa
aaacactatctattctttctcttctagcgttgtcctttatatagctcatg
ttctacttggaaaagagggtcatgtgccatttccccccctctttctcttt
gcactccataattcta
gaattcacggctgggactgtaaatgtgttcaaaactcatggctaaggaag
tcataggccctaggggagagccttctggtgttgttcagctgcctccttca
taatcatgttcatatacatagatttgtggtattctcagccttcatcagag
gagcttcttgtaatgggtagaagttaacccacagatctattactatgcaa
agagctgtaaatgagtgctcagtcataggacatgtgtatcactctcacta
cccaaaactagggaacaccagaaaggagcagtagaaattgtgtaagagca
agagggtgggaaagaatgatatgaagtgcttcctataaacatagtcttgc
tgtggcacaaatgaacttaccacagccgggaggcatacatgaacccatgg
ctgccgggattacctgcagaggatcaagccagctaagagttttagcaaag
ggactggaaagatggctcagtggtttaaaattgtttttcttttgcagagg
acctagattctgttcctagcattgaggcactggattctttcaatccatac
tttcaggtccaggggctctgacacactcttctgacctctgagggcaccac
accaggcatgtgagtagtgcacatacacacatacatgcaggtatagcatt
ctaaataaatctaaagaaaggagtcccagcatggagggaggagaggctct
tagaactctaccctatctgaagtttttactgttagttgatggctgatgga
gaagaaaaatacacttctttttgagatatgaccactgttaagttggccaa
tccccaggagataactaacttccatatatatatatatatatatacacaca
cacatatatatatatgtatatacatatatacatacatatatatatatata
tatatatatatatatatatatgtatcaccaactggacttagttggttcaa
aaaagtcatttaattaaacccataaaaataatcataaaggaaggtgttgt
gttaagttgaagccgagaatgggcttgctgttctgaaggaaggagaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_76028422_76029546
seq2: B6Ng01-112E06.b_45_1160 (reverse)

seq1  TAGATTTATGGAGTGCAGAGAGGAAGAGGGGGAGAAAT-GCACATGACCC  49
      |||| |||||||||||| |||| ||||||||| ||||| |||||||||||
seq2  TAGAATTATGGAGTGCAAAGAGAAAGAGGGGGGGAAATGGCACATGACCC  50

seq1  TTCTTTCTCAAGGTTAGAACATGGAGCTATATAAAGGACCACGCTTAGAG  99
       |||||  ||||  |||||||| |||||||||||||||| |||| |||| 
seq2  -TCTTTTCCAAG--TAGAACAT-GAGCTATATAAAGGACAACGC-TAGAA  95

seq1  GAGAAAAGAAATAGATAGTGTTTTTCCTTCTCTGATTGGCTTGAATCAGT  149
      ||||||   |||||||||||||||||| ||||||| |||| |||||||||
seq2  GAGAAA--GAATAGATAGTGTTTTTCC-TCTCTGA-TGGC-TGAATCAGT  140

seq1  GCCCCCTGTCCCCACTCCCCAAGCTGTTCACAGGTGCTAAGCAGGCTTTA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCCTGTCCCCACTCCCCAAGCTGTTCACAGGTGCTAAGCAGGCTTTA  190

seq1  ACAGATTCAGGTATTTCTGCAACAGGAAAATATTTAGAAGAGTCAACTTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATTCAGGTATTTCTGCAACAGGAAAATATTTAGAAGAGTCAACTTG  240

seq1  AGAAGTGGATAGATAAGTAATTGATTTGGGACTCCTGGGTATAATACATT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGGATAGATAAGTAATTGATTTGGGACTCCTGGGTATAATACATT  290

seq1  TTGTTCATTAAAGATGTGCAAAGCCTCTGGGGTTATGCTATCACCCCTGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCATTAAAGATGTGCAAAGCCTCTGGGGTTATGCTATCACCCCTGC  340

seq1  TAGCTTCTATACTGCCTCACTGACCAACATCTGCAGTCATCTCCGTGTGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTCTATACTGCCTCACTGACCAACATCTGCAGTCATCTCCGTGTGT  390

seq1  CCCAGAGCCCTCTGAAGTCGTCCCACTGTTCATATTTTATTCCTGGCAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGCCCTCTGAAGTCGTCCCACTGTTCATATTTTATTCCTGGCAAC  440

seq1  CCACGCTCAGCTTCTTGAATGGATAATATTCTTTCTAACACCCAGTTAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGCTCAGCTTCTTGAATGGATAATATTCTTTCTAACACCCAGTTAAA  490

seq1  ATGACTCTGTTTGAAGGGGGCTTCATTTCCATAATGGGCTGAAACCTGCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTCTGTTTGAAGGGGGCTTCATTTCCATAATGGGCTGAAACCTGCT  540

seq1  GGTATTTAACAGCTCAGTGGAAGGTTAAAGGTGCTGAATTTTAATCAAGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTAACAGCTCAGTGGAAGGTTAAAGGTGCTGAATTTTAATCAAGG  590

seq1  GAGTTTTTTTTTTCTTTCATTTTCCATACCACCAGGTGTAATCCTCCTCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTTTTTTTCTTTCATTTTCCATACCACCAGGTGTAATCCTCCTCT  640

seq1  ATCTTTCATTTATCAGACATTCACAGTGCCAAGTGGTGCTTAAACTAGTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCATTTATCAGACATTCACAGTGCCAAGTGGTGCTTAAACTAGTA  690

seq1  TGTGGTATCACTCAGATCTGATTGGAATTGTACAGTATGGAGTGTTACAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTATCACTCAGATCTGATTGGAATTGTACAGTATGGAGTGTTACAG  740

seq1  TGTTCTCTGGTTCCTGGTGCCATTCTCAGAATGAAGAAGTCAAGAGGCCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCTGGTTCCTGGTGCCATTCTCAGAATGAAGAAGTCAAGAGGCCA  790

seq1  AACATAGTGTGCTAAAGGTGCAGTTCCCCCTAGAGTGTGTCCGATTGCAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGTGTGCTAAAGGTGCAGTTCCCCCTAGAGTGTGTCCGATTGCAT  840

seq1  GACTAGCCTGGATATGGTTATAAAAACTGGTTCTAATAGTTCTTATTAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGCCTGGATATGGTTATAAAAACTGGTTCTAATAGTTCTTATTAAA  890

seq1  TATACATGACACAAGTCCTGAGGTTTTCTCCAGAGGTTTAAGCCCAGCGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATGACACAAGTCCTGAGGTTTTCTCCAGAGGTTTAAGCCCAGCGT  940

seq1  TCATACGCACAAGCCGCTTTTGTTAACTAAAATCAGTATCTATTCACTGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACGCACAAGCCGCTTTTGTTAACTAAAATCAGTATCTATTCACTGA  990

seq1  ACAGGAAATACCAAAAGTTTCACAGCAAAACACACCTTGAAGGCAACAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAATACCAAAAGTTTCACAGCAAAACACACCTTGAAGGCAACAAA  1040

seq1  ACCTGATCTGCTTCTCTCAGCTCATTTCCTCATGTAACTGACTCACTCTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGATCTGCTTCTCTCAGCTCATTTCCTCATGTAACTGACTCACTCTT  1090

seq1  CCCTGATGAAAGTTGAGGGAGAATTC  1125
      ||||||||||||||||||||||||||
seq2  CCCTGATGAAAGTTGAGGGAGAATTC  1116

seq1: chr7_75868621_75869517
seq2: B6Ng01-112E06.g_222_1116

seq1  TTCTTGTAATGGGTAGAAGTTAACCCACAGATCTATTACTATGCAAAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTAATGGGTAGAAGTTAACCCACAGATCTATTACTATGCAAAGAG  50

seq1  CTGTAAATGAGTGCTCAGTCATAGGACATGTGTATCACTCTCACTACCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAATGAGTGCTCAGTCATAGGACATGTGTATCACTCTCACTACCCA  100

seq1  AAACTAGGGAACACCAGAAAGGAGCAGTAGAAATTGTGTAAGAGCAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAGGGAACACCAGAAAGGAGCAGTAGAAATTGTGTAAGAGCAAGAG  150

seq1  GGTGGGAAAGAATGATATGAAGTGCTTCCTATAAACATAGTCTTGCTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGAAAGAATGATATGAAGTGCTTCCTATAAACATAGTCTTGCTGTG  200

seq1  GCACAAATGAACTTACCACAGCCGGGAGGCATACATGAACCCATGGCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAATGAACTTACCACAGCCGGGAGGCATACATGAACCCATGGCTGC  250

seq1  CGGGATTACCTGCAGAGGATCAAGCCAGCTAAGAGTTTTAGCAAAGGGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGATTACCTGCAGAGGATCAAGCCAGCTAAGAGTTTTAGCAAAGGGAC  300

seq1  TGGAAAGATGGCTCAGTGGTTTAAAATTGTTTTTCTTTTGCAGAGGACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGATGGCTCAGTGGTTTAAAATTGTTTTTCTTTTGCAGAGGACCT  350

seq1  AGATTCTGTTCCTAGCATTGAGGCACTGGATTCTTTCAATCCATACTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCTGTTCCTAGCATTGAGGCACTGGATTCTTTCAATCCATACTTTC  400

seq1  AGGTCCAGGGGCTCTGACACACTCTTCTGACCTCTGAGGGCACCACACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCAGGGGCTCTGACACACTCTTCTGACCTCTGAGGGCACCACACCA  450

seq1  GGCATGTGAGTAGTGCACATACACACATACATGCAGGTATAGCATTCTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGTGAGTAGTGCACATACACACATACATGCAGGTATAGCATTCTAA  500

seq1  ATAAATCTAAAGAAAGGAGTCCCAGCATGGAGGGAGGAGAGGCTCTTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCTAAAGAAAGGAGTCCCAGCATGGAGGGAGGAGAGGCTCTTAGA  550

seq1  ACTCTACCCTATCTGAAGTTTTTACTGTTAGTTGATGGCTGATGGAGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTACCCTATCTGAAGTTTTTACTGTTAGTTGATGGCTGATGGAGAAG  600

seq1  AAAAATACACTTCTTTTTGAGATATGACCACTGTTAAGTTGGCCAATCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATACACTTCTTTTTGAGATATGACCACTGTTAAGTTGGCCAATCCC  650

seq1  CAGGAGATAACTAACTTCCATATATATATATATATATATACACACACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGATAACTAACTTCCATATATATATATATATATATACACACACACA  700

seq1  TATATATATATGTATATACATATATACATACATATATATATATATATATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATGTATATACATATATACATACATATATATATATATATATA  750

seq1  TATATATATATATATATGTATCACCAACTGGACTCAGTTGGTTCAAAAAA  800
      |||||||||||||||||||||||||||||||||| ||||||||| |||||
seq2  TATATATATATATATATGTATCACCAACTGGACTTAGTTGGTTC-AAAAA  799

seq1  AGTTCAATAAATAAACCCATAAAAATAATCATAAAGGAGGGTGTTGGTGT  850
      |||    ||| ||||||||||||||||||||||||||| |||||| ||||
seq2  AGTCATTTAATTAAACCCATAAAAATAATCATAAAGGAAGGTGTT-GTGT  848

seq1  TAAGTTGAAGCCGTGAAT-GGCTGGCTGTTCTTGAGGGAAGGAGAATA  897
      ||||||||||||| |||| |||| ||||||| ||| ||||||||||||
seq2  TAAGTTGAAGCCGAGAATGGGCTTGCTGTTC-TGAAGGAAGGAGAATA  895