BAC Information

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BAC

Clone NameB6Ng01-112H18
Chromosome7 (Build37)
Map Location 77,316,511 - 77,461,076
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC384741, EG665410
Downstream geneNr2f2, LOC100042833, B130024G19Rik, LOC100042838, LOC665486, LOC100041957
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112H18.bB6Ng01-112H18.g
ACCDH918536DH918537
length8881,118
definitionDH918536|Mus musculus domesticus DNA, BAC clone: B6Ng01-112H18, 5' end.DH918537|Mus musculus domesticus DNA, BAC clone: B6Ng01-112H18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,460,197 - 77,461,076)(77,316,511 - 77,317,633)
sequence
gaattcctgcttcagaattcattacaggaggtgaaggacaatggtgaaaa
tttgagtctactagacagttcagcaggtcaaaatatagttgggccactaa
aagttaaataaatcggggagttaaaattcactggaaagtgtatttttaat
ggaggtttccaggttcttcagtgatcttaggtttctcagggctggtgtga
tggatcagtgggtaaagtatttaccatcaagcttgggaagctcgacaagt
tgagttgaatcctggacccacatagtggaaggagagaaacaattcatatt
aattgtctcctgatttacttggatactgtggcatgagcatactgtccccc
ataaggaaacaaagtgtgagacgaagattctgtgacattttaattttcct
taatatttttgagccactgatgtacgcatccctactagaattctgcatct
atgctgacatgtgaatagaaaagagcagctgcttttttggaactatcatc
agcatcttcctatgaggcactgagggtttttttgggttcttctagaaggg
ttgcaagagatcagatttgtccttggtctacatctaacttgtttctcatc
ctatttaataataatatgatacacacacacacacacacacacacacacat
acatatatatatatatatatatatatatatatatatatccttttgacaaa
ataaaccaagtttcaaaacaacacatgttgattaatattagaaaaatatg
gaatatgaatgaagaatatgtttacatttttgtgtctttctagtcactcc
cccttgtagttttaaagttgtttccactgattttctgatagtctacccct
aaagaattgtaatctaatttctgggaagtggtattgcg
gaattcatttataagggatacgcacctacttctttagttaaaaccagtga
tccattaaggcttctctcgcttttttccaagctccgagcatactgactat
ttaagtatgaaagggcgtgaaggtggggggtaggtttagctaaataaaag
attgcttgatatcttggggttctttgaagagttttataggcttagagttc
acagtttgaatgaaggacatttttaaaacttttctatatggaagtttgtt
aacctgcatttcaattattgaataattaattaattatactaattgtcaca
gtgaaaaaattacatgatgagcaactggagctgcagtcatgaattgaagt
ttatggatgtaatgtggaaataagtaaaattgtctccgggtctcagcagt
ttataatctggagcatacagtgtttgctttatatgcagactcttagatat
tctggaatgtttgctttgtagtttataaaactggtatttgaatgctaaat
ctgtttaattattttatgaaacaacaataacaaaaaacaaaaatgagtta
tttatcatttgtgccgttttggctttaaaaatttgctcatattgacaaac
aaggcaaataaagtcattgtacatgaaatacattcttgtagaaaaataat
tatgtctatatacttagaaacctaagttccaaaacaaggaaggatatgta
tttcaaagtatgaaagttcatcttttggaaattttgtttttaaaaaatat
atttaaaacaacacacacttcaaattctctacactgagagaagaaaattc
actttcattaaatgtttactgctagacaaaacaaaaacaaaacaaaacag
aaactcttgcactttattatcttgaatgcttaatgagccttgaaacacaa
aacaactaaactaaactaagtcttcgcagactttgtatgaaatacttctc
ctgacagaataaacagaatcaaacccgagtacacatggggccaatattga
cacagaccactgagaaagcgagatgcccgatcaatctggctcagcctctc
ctgcctagcaaattctcggctacagaatgggtttctaaaagtaaacaaga
tagaaacccaactttttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_77460197_77461076
seq2: B6Ng01-112H18.b_44_930 (reverse)

seq1  GCAATACCACTT-CCAGAAATTAGATAACACTTCTTAAGGGGTAGACTAT  49
      |||||||||||| ||||||||||||| ||| ||||| |||||||||||||
seq2  GCAATACCACTTCCCAGAAATTAGATTACAATTCTTTAGGGGTAGACTAT  50

seq1  CAGAAAATCAGTGGAAACAACTTTAAAACTACAAGGGGGAGTGACTAGAA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATCAGTGGAAACAACTTTAAAACTACAAGGGGGAGTGACTAGAA  100

seq1  AGACAC-AAAATGTTAACATATTCTTCATTCATATTCCATATTTTTGCTA  148
      |||||| ||||||| ||||||||||||||||||||||||||||||| |||
seq2  AGACACAAAAATGTAAACATATTCTTCATTCATATTCCATATTTTT-CTA  149

seq1  ATATTAATCAACATGTGTTGTTTTGAAACTTGGTTTATTTTGTCAATAGG  198
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATATTAATCAACATGTGTTGTTTTGAAACTTGGTTTATTTTGTCAAAAGG  199

seq1  ATATATATATATATATATATATATATATATATATATGTATGTGTGTGTGT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATATATGTATGTGTGTGTGT  249

seq1  GTGTGTGTGTGTGTGTGTATCATATTATTATTAAATAGGATGAG-AACAA  297
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GTGTGTGTGTGTGTGTGTATCATATTATTATTAAATAGGATGAGAAACAA  299

seq1  GTTAGATGTAGACCAAGGACAAATCTGATCTCTTGCAACCCTTCTAGAAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGATGTAGACCAAGGACAAATCTGATCTCTTGCAACCCTTCTAGAAG  349

seq1  AACCC--AGAAAGCCTCAGTGCCTCATAGGAAGATGCTGATGATAGTTCC  395
      |||||  | ||| |||||||||||||||||||||||||||||||||||||
seq2  AACCCAAAAAAACCCTCAGTGCCTCATAGGAAGATGCTGATGATAGTTCC  399

seq1  ---AAAGCAGCTGCTCTTTTCTATTCACATGTCAGCATAGATGCAGAATT  442
         |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGCAGCTGCTCTTTTCTATTCACATGTCAGCATAGATGCAGAATT  449

seq1  CTAGTAGGGATGCGTACATCAGTGGCTCAAAAATATTAAGGAAAATTAAA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTAGGGATGCGTACATCAGTGGCTCAAAAATATTAAGGAAAATTAAA  499

seq1  ATGTCACAGAATCTTCGTCTCACACTTTGTTTCCTTATGGGGGACAGTAT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACAGAATCTTCGTCTCACACTTTGTTTCCTTATGGGGGACAGTAT  549

seq1  GCTCATGCCACAGTATCCAAGTAAATCAGGAGACAATTAATATGAATTGT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATGCCACAGTATCCAAGTAAATCAGGAGACAATTAATATGAATTGT  599

seq1  TTCTCTCCTTCCACTATGTGGGTCCAGGATTCAACTCAACTTGTCGAGCT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCCTTCCACTATGTGGGTCCAGGATTCAACTCAACTTGTCGAGCT  649

seq1  TCCCAAGCTTGATGGTAAATACTTTACCCACTGATCCATCACACCAGCCC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGCTTGATGGTAAATACTTTACCCACTGATCCATCACACCAGCCC  699

seq1  TGAGAAACCTAAGATCACTGAAGAACCTGGAAACCTCCATTAAAAATACA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAACCTAAGATCACTGAAGAACCTGGAAACCTCCATTAAAAATACA  749

seq1  CTTTCCAGTGAATTTTAACTCCCCGATTTATTTAACTTTTAGTGGCCCAA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCAGTGAATTTTAACTCCCCGATTTATTTAACTTTTAGTGGCCCAA  799

seq1  CTATATTTTGACCTGCTGAACTGTCTAGTAGACTCAAATTTTCACCATTG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATTTTGACCTGCTGAACTGTCTAGTAGACTCAAATTTTCACCATTG  849

seq1  TCCTTCACCTCCTGTAATGAATTCTGAAGCAGGAATTC  880
      ||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCACCTCCTGTAATGAATTCTGAAGCAGGAATTC  887

seq1: chr7_77316511_77317633
seq2: B6Ng01-112H18.g_70_1187

seq1  GAATTCATTTATAAGGGATACGCACCTACTTCTTTAGTTAAAACCAGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTATAAGGGATACGCACCTACTTCTTTAGTTAAAACCAGTGA  50

seq1  TCCATTAAGGCTTCTCTCGCTTTTTTCCAAGCTCCGAGCATACTGACTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTAAGGCTTCTCTCGCTTTTTTCCAAGCTCCGAGCATACTGACTAT  100

seq1  TTAAGTATGAAAGGGCGTGAAGGTGGGGGGTAGGTTTAGCTAAATAAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTATGAAAGGGCGTGAAGGTGGGGGGTAGGTTTAGCTAAATAAAAG  150

seq1  ATTGCTTGATATCTTGGGGTTCTTTGAAGAGTTTTATAGGCTTAGAGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTGATATCTTGGGGTTCTTTGAAGAGTTTTATAGGCTTAGAGTTC  200

seq1  ACAGTTTGAATGAAGGACATTTTTAAAACTTTTCTATATGGAAGTTTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTGAATGAAGGACATTTTTAAAACTTTTCTATATGGAAGTTTGTT  250

seq1  AACCTGCATTTCAATTATTGAATAATTAATTAATTATACTAATTGTCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGCATTTCAATTATTGAATAATTAATTAATTATACTAATTGTCACA  300

seq1  GTGAAAAAATTACATGATGAGCAACTGGAGCTGCAGTCATGAATTGAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAAAATTACATGATGAGCAACTGGAGCTGCAGTCATGAATTGAAGT  350

seq1  TTATGGATGTAATGTGGAAATAAGTAAAATTGTCTCCGGGTCTCAGCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGATGTAATGTGGAAATAAGTAAAATTGTCTCCGGGTCTCAGCAGT  400

seq1  TTATAATCTGGAGCATACAGTGTTTGCTTTATATGCAGACTCTTAGATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATCTGGAGCATACAGTGTTTGCTTTATATGCAGACTCTTAGATAT  450

seq1  TCTGGAATGTTTGCTTTGTAGTTTATAAAACTGGTATTTGAATGCTAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAATGTTTGCTTTGTAGTTTATAAAACTGGTATTTGAATGCTAAAT  500

seq1  CTGTTTAATTATTTTATGAAACAACAATAACAAAAAACAAAAATGAGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTAATTATTTTATGAAACAACAATAACAAAAAACAAAAATGAGTTA  550

seq1  TTTATCATTTGTGCCGTTTTGGCTTTAAAAATTTGCTCATATTGACAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCATTTGTGCCGTTTTGGCTTTAAAAATTTGCTCATATTGACAAAC  600

seq1  AAGGCAAATAAAGTCATTGTACATGAAATACATTCTTGTAGAAAAATAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAAATAAAGTCATTGTACATGAAATACATTCTTGTAGAAAAATAAT  650

seq1  TATGTCTATATACTTAGAAACCTAAGTTCCAAAACAAGGAAGGATATGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTATATACTTAGAAACCTAAGTTCCAAAACAAGGAAGGATATGTA  700

seq1  TTTCAAAGTATGAAAGTTCATCTTTTGGAAATTTTGTTTTTAAAAAATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAGTATGAAAGTTCATCTTTTGGAAATTTTGTTTTTAAAAAATAT  750

seq1  ATTTAAAACAACACACACTTCAAATTCTCTACACTGAGAGAAGAAAATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAACAACACACACTTCAAATTCTCTACACTGAGAGAAGAAAATTC  800

seq1  ACTTTCATTAAATGTTTACTGCTAGACAAAACAAAAACAAAACAAAACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCATTAAATGTTTACTGCTAGACAAAACAAAAACAAAACAAAACAG  850

seq1  AAACTCTTGCACTTTATTTATCTTGAAATGCTTAAATGAGCCTTGGAACA  900
      |||||||||||||||| |||||||| ||||||| ||||||||||| ||||
seq2  AAACTCTTGCACTTTA-TTATCTTG-AATGCTT-AATGAGCCTTGAAACA  897

seq1  CAAAAACAACTAAACTAAACTAAGTC-TCGCAGAC-TTGTATGAAATACT  948
      | |||||||||||||||||||||||| |||||||| ||||||||||||||
seq2  C-AAAACAACTAAACTAAACTAAGTCTTCGCAGACTTTGTATGAAATACT  946

seq1  TCTCCTGACAAGAATAAACAGAATCAAA-CCGAGTACACAT-GGGCCAAT  996
      ||||||||| |||||||||||||||||| |||||||||||| ||||||||
seq2  TCTCCTGAC-AGAATAAACAGAATCAAACCCGAGTACACATGGGGCCAAT  995

seq1  ATTGACACAGACCACTGAGAAAGCGAGAATGCTCGATCAATCT-GCTCAG  1045
      ||||||||||||||||||||||||||| |||| |||||||||| ||||||
seq2  ATTGACACAGACCACTGAGAAAGCGAG-ATGCCCGATCAATCTGGCTCAG  1044

seq1  CCTTCTCCTGCCTAGCAAAATTCTCGGCTACAGTATTGGTTTCTAAGAGT  1095
      || ||||||||||||| |||||||||||||||| || ||||||||| |||
seq2  CC-TCTCCTGCCTAGC-AAATTCTCGGCTACAGAATGGGTTTCTAAAAGT  1092

seq1  AAACAAGATTAAGACACCGAACTTTTTC  1123
      |||||||||  ||| ||| |||||||||
seq2  AAACAAGAT--AGAAACCCAACTTTTTC  1118