BAC Information

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BAC

Clone NameB6Ng01-112J11
Chromosome7 (Build37)
Map Location 145,643,527 - 145,655,726
singlet/doubletdoublet
Overlap genenone
Upstream geneTxnl2, LOC435235, Tcerg1l
Downstream geneLOC100043290, Mapk1ip1, Ppp2r2d, Bnip3, EG668784, LOC669185, 6330417G02Rik, Dpysl4, Stk32c, LOC100038956, Lrrc27, Pwwp2, Inpp5a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112J11.bB6Ng01-112J11.g
ACCDH918616DH918617
length9251,211
definitionDH918616|Mus musculus domesticus DNA, BAC clone: B6Ng01-112J11, 5' end.DH918617|Mus musculus domesticus DNA, BAC clone: B6Ng01-112J11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(145,654,800 - 145,655,726)(145,643,527 - 145,644,728)
sequence
gaattccaaatgcagttcagagattttctccaggttcctctaatctgcac
atttagacaatgcttcaaggtcttgctaatagtggtctttatgcctttat
gaaagattgaaatctaagacccctgagccatgactacagacatcagaaaa
accttcaggtttttttttctttccattttttattaggtatttagctcatt
tacatttccaatgctataccaaaagtcccccatacccacccacccccact
cccctacccgcccactccccctttttggccctggcattcccctgttctgg
ggcatataaagtttgtgtgtccaatgggcctctctttgcagtgatggccg
actaggccatcttttgatacatatgcagctagagtcaagagctctggggt
actggttagttcataatgttgatccacctatagggttgcagatcccttta
gctccttgggtactttctctagctcctccattgggagccctgtgatccat
ccattagctgactgtgggcatccacttctgtgtttgctccttcaggtttt
atatctgagagttttgtcactttaagatagaagcagcatgctttgctagc
tactggtgaaacttttggcaggtactgtaagggtggtgaaaatataatag
aaatgtgaaaatattgatgcctaagtttttctgaaaaatatgatagaggt
tccacacccaagtcccacatgtgaatgctgggctatgggcaccaagttag
tcacttactctacggcacagagtactgaactctggagccaaggtggccac
ccagagtcatgagaccaaagataatatctgctgcaaataggccatcaatg
gcacccagggctgggagttaaggacagaggagcccagcaaaacaggtggg
taggagagtggttggataaaagagc
gaattctctatactccactcactgaatccctcgctcctgatgaggagtta
gtacagagccttagactgatggagtccaggatagaagctcactcagcgct
gggatgcaaaagcgggaaaccacactgacaattattacatagcaattgtc
ttagtcagtgtacttaggcagttgctgtgaaaagtcaccatgaccctggc
agctctcataaaggaaaacatttaactggggctggcttacagattcagag
gttcagtccattatcgtcatggtgggaaacatggcagcatgcgggcagac
atagtgctggagaggtggctgagagttctacatctgagtcggcagtcagc
aggaaagaatatcattagctacgccggactcaagcttctaagtcatcaaa
atcctccccctagtgatgcgcttccttcaacaaggccaggcttcctacta
gtgccactccctatggaccctatggaggccatttttattcaggccaacac
agagatgttcctgacaccaaccccaaatcaaagatggtagactccctaga
tacataaaaagcctttatgctagctaatttctttttatgtcactgtcgtc
ttcttcctcttcctcttcctcttcctcctcctcctcctcctcctcctctt
cctcttcctcttcctcttcctcttcctcttcctcttcctcttcctcttct
tcttcttcttcttcttcttcttcttcttcttcttctcttctcttggtgat
gggacaaacattaaaaagtttatttttggtgtaacaaagcttacatgatc
cacaaaataacctttcataattataatgttattatgaaatttcttatcta
aaagtaattcattttctctcatgcttgaatgttctccattttttttcctg
acatgcatgatttgtactcaattataagtggatattagccataaagtaca
ggatatacccacactacaatccacaggcccaaatttaatgaaatacaagg
aggacccaggcaagaattctttaaacttcactcagacagggaaacacaat
tgtcattcgctagctggtttcttgtttcaagactcattcactgggctcca
ggatattttctctgaagataggaatatctacacagagatttcagtttagc
tgatcggagttgaatcgcttccagttggggtgcctttattccctggtggc
acgcgagggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_145654800_145655726
seq2: B6Ng01-112J11.b_45_969 (reverse)

seq1  GCTCTTTTCTATCCACCCACTCTCCTAACCACCTGTTTTGCTGGGCTTCC  50
      |||||||  |||||| ||||||||||| |||||||||||||||||| |||
seq2  GCTCTTT--TATCCAACCACTCTCCTACCCACCTGTTTTGCTGGGC-TCC  47

seq1  TCTGTCCTTAACTCCCAGCCCTGGGTGCCATTGATGGCCTATTTGCAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCTTAACTCCCAGCCCTGGGTGCCATTGATGGCCTATTTGCAGCA  97

seq1  GATATTATCTTGGGTCTCATGACTCTGGGTGGCCACCTTGGCTCCAGAGT  150
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GATATTATCTTTGGTCTCATGACTCTGGGTGGCCACCTTGGCTCCAGAGT  147

seq1  TCAGTACTCTGTGCCGTAGAGTAAGTGACTAAACTTGGTGCCCATAG-CC  199
      |||||||||||||||||||||||||||||| |||||||||||||||| ||
seq2  TCAGTACTCTGTGCCGTAGAGTAAGTGACT-AACTTGGTGCCCATAGCCC  196

seq1  AGCATTCACATGTGGGACTTGGGTGTGGAAACCTCTATCATA-TTTTCAG  248
      |||||||||||||||||||||||||||| ||||||||||||| |||||||
seq2  AGCATTCACATGTGGGACTTGGGTGTGG-AACCTCTATCATATTTTTCAG  245

seq1  -AAAACTTAGGCATCAATATTTTCACATTTCTATTATATTTTCACCACCC  297
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTTAGGCATCAATATTTTCACATTTCTATTATATTTTCACCACCC  295

seq1  TTACAGTACCTGCCAAAAGTTTCACCAGTAGCTAGCAAAGCATGCTGCTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGTACCTGCCAAAAGTTTCACCAGTAGCTAGCAAAGCATGCTGCTT  345

seq1  CTATCTTAAAGTGACAAAACTCTCAGATATAAAACCTGAAGGAGCAAACA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTTAAAGTGACAAAACTCTCAGATATAAAACCTGAAGGAGCAAACA  395

seq1  CAGAAGTGGATGCCCACAGTCAGCTAATGGATGGATCACAGGGCTCCCAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTGGATGCCCACAGTCAGCTAATGGATGGATCACAGGGCTCCCAA  445

seq1  TGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTA  495

seq1  TAGGTGGATCAACATTATGAACTAACCAGTACCCCAGAGCTCTTGACTCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGGATCAACATTATGAACTAACCAGTACCCCAGAGCTCTTGACTCT  545

seq1  AGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGCAAAGAGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGCAAAGAGA  595

seq1  GGCCCATTGGACACACAAACTTTATATGCCCCAGAACAGGGGAATGCCAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCATTGGACACACAAACTTTATATGCCCCAGAACAGGGGAATGCCAG  645

seq1  GGCCAAAAAGGGGGAGTGGGCGGGTAGGGGAGTGGGGGTGGGTGGGTATG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAAAAGGGGGAGTGGGCGGGTAGGGGAGTGGGGGTGGGTGGGTATG  695

seq1  GGGGACTTTTGGTATAGCATTGGAAATGTAAATGAGCTAAATACCTAATA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACTTTTGGTATAGCATTGGAAATGTAAATGAGCTAAATACCTAATA  745

seq1  AAAAATGGAAAGAAAAAAAAACCTGAAGGTTTTTCTGATGTCTGTAGTCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGGAAAGAAAAAAAAACCTGAAGGTTTTTCTGATGTCTGTAGTCA  795

seq1  TGGCTCAGGGGTCTTAGATTTCAATCTTTCATAAAGGCATAAAGACCACT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCAGGGGTCTTAGATTTCAATCTTTCATAAAGGCATAAAGACCACT  845

seq1  ATTAGCAAGACCTTGAAGCATTGTCTAAATGTGCAGATTAGAGGAACCTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCAAGACCTTGAAGCATTGTCTAAATGTGCAGATTAGAGGAACCTG  895

seq1  GAGAAAATCTCTGAACTGCATTTGGAATTC  927
      ||||||||||||||||||||||||||||||
seq2  GAGAAAATCTCTGAACTGCATTTGGAATTC  925

seq1: chr7_145643527_145644728
seq2: B6Ng01-112J11.g_67_1277

seq1  GAATTCTCTATACTCCACTCACTGAATCCCTCGCTCCTGATGAGGAGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATACTCCACTCACTGAATCCCTCGCTCCTGATGAGGAGTTA  50

seq1  GTACAGAGCCTTAGACTGATGGAGTCCAGGATAGAAGCTCACTCAGCGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGAGCCTTAGACTGATGGAGTCCAGGATAGAAGCTCACTCAGCGCT  100

seq1  GGGATGCAAAAGCGGGAAACCACACTGACAATTATTACATAGCAATTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGCAAAAGCGGGAAACCACACTGACAATTATTACATAGCAATTGTC  150

seq1  TTAGTCAGTGTACTTAGGCAGTTGCTGTGAAAAGTCACCATGACCCTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCAGTGTACTTAGGCAGTTGCTGTGAAAAGTCACCATGACCCTGGC  200

seq1  AGCTCTCATAAAGGAAAACATTTAACTGGGGCTGGCTTACAGATTCAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTCATAAAGGAAAACATTTAACTGGGGCTGGCTTACAGATTCAGAG  250

seq1  GTTCAGTCCATTATCGTCATGGTGGGAAACATGGCAGCATGCGGGCAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGTCCATTATCGTCATGGTGGGAAACATGGCAGCATGCGGGCAGAC  300

seq1  ATAGTGCTGGAGAGGTGGCTGAGAGTTCTACATCTGAGTCGGCAGTCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGCTGGAGAGGTGGCTGAGAGTTCTACATCTGAGTCGGCAGTCAGC  350

seq1  AGGAAAGAATATCATTAGCTACGCCGGACTCAAGCTTCTAAGTCATCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGAATATCATTAGCTACGCCGGACTCAAGCTTCTAAGTCATCAAA  400

seq1  ATCCTCCCCCTAGTGATGCGCTTCCTTCAACAAGGCCAGGCTTCCTACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCCCCCTAGTGATGCGCTTCCTTCAACAAGGCCAGGCTTCCTACTA  450

seq1  GTGCCACTCCCTATGGACCCTATGGAGGCCATTTTTATTCAGGCCAACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCACTCCCTATGGACCCTATGGAGGCCATTTTTATTCAGGCCAACAC  500

seq1  AGAGATGTTCCTGACACCAACCCCAAATCAAAGATGGTAGACTCCCTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGTTCCTGACACCAACCCCAAATCAAAGATGGTAGACTCCCTAGA  550

seq1  TACATAAAAAGCCTTTATGCTAGCTAATTTCTTTTTATGTCACTGTCGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAAAAGCCTTTATGCTAGCTAATTTCTTTTTATGTCACTGTCGTC  600

seq1  TTCTTCCTCTTCCTCTTCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTCTTCCTCTTCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCTT  650

seq1  CCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCT  700

seq1  TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTCTCTTGGTGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTCTCTTGGTGAT  750

seq1  GGGACAAACATTAAAAAGTTTATTTTTGGTGTAACAAAGCTTACATGATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAAACATTAAAAAGTTTATTTTTGGTGTAACAAAGCTTACATGATC  800

seq1  CACAAAATAACCTTTCATAATTATAATGTTATTATGAAATTTCTTATCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAATAACCTTTCATAATTATAATGTTATTATGAAATTTCTTATCTA  850

seq1  AAAGTAATTCATTTTCTCTCATGCTTGAATGTTCTCCA-TTTTTTTCCTG  899
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAAGTAATTCATTTTCTCTCATGCTTGAATGTTCTCCATTTTTTTTCCTG  900

seq1  ACATGCATGATATGTACTCAATTATAAGTGGATATTAGCCATAAAGTACA  949
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ACATGCATGATTTGTACTCAATTATAAGTGGATATTAGCCATAAAGTACA  950

seq1  GGATATACCCACACTACAATCCACAGGCCCAAA-TAAATGAAATAACAAG  998
      ||||||||||||||||||||||||||||||||| | |||||||| |||||
seq2  GGATATACCCACACTACAATCCACAGGCCCAAATTTAATGAAAT-ACAAG  999

seq1  GAGGACCCAAGCAAGAATCCTTAAAAC-TCACTCAGACAGGGAAACACAA  1047
      ||||||||| |||||||| ||| |||| ||||||||||||||||||||||
seq2  GAGGACCCAGGCAAGAATTCTTTAAACTTCACTCAGACAGGGAAACACAA  1049

seq1  TTGTCA-TCGCTAGCTGGTTTCTTGTTTC-AGACTCATTCACTGGGCTCC  1095
      |||||| |||||||||||||||||||||| ||||||||||||||||||||
seq2  TTGTCATTCGCTAGCTGGTTTCTTGTTTCAAGACTCATTCACTGGGCTCC  1099

seq1  AGGGATA-TTTCTCTGAAGATAGGAAATATCTACACAGAGATTTCAGTTT  1144
      | ||||| |||||||||||||||| |||||||||||||||||||||||||
seq2  A-GGATATTTTCTCTGAAGATAGG-AATATCTACACAGAGATTTCAGTTT  1147

seq1  AGCTGATC-GAGTTGATGCCGCTCCAGTTGGGGTGGCTTTAT--CCTG--  1189
      |||||||| |||||||  |   ||||||||||||| ||||||  ||||  
seq2  AGCTGATCGGAGTTGAATCGCTTCCAGTTGGGGTGCCTTTATTCCCTGGT  1197

seq1  GGCAC-CGAGGGCC  1202
      ||||| ||||||||
seq2  GGCACGCGAGGGCC  1211