BAC Information

Click to search

BAC

Clone NameB6Ng01-113F23
Chromosome7 (Build37)
Map Location 120,450,658 - 120,451,763
singlet/doubletsinglet
Overlap geneArntl
Upstream geneMical2, Micalcl, Parva, LOC627808, Tead1, 4632411J06Rik, LOC434227, A630005I04Rik
Downstream geneBtbd10, Pth, LOC100042736, Mlstd2, EG434228, Spon1, Rras2, LOC668451, Copb1, Psma1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113F23.bB6Ng01-113F23.g
ACCDH919185DH919186
length1,1211,152
definitionDH919185|Mus musculus domesticus DNA, BAC clone: B6Ng01-113F23, 5' end.DH919186|Mus musculus domesticus DNA, BAC clone: B6Ng01-113F23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatggattaaggcaagcaagggttttgaacttggtctcagctaag
gtttacagtaaaggtaggtgctaaaaagtcaggagtgtaggtgctaaaaa
gtcaggagtgtaggtgctaaaagtccggactgctcagtctgcgagcagtg
tgaatagtgttcagggcactctaactggccagacttcctgaaggaaggaa
gcacagacctctaaagggagagggttaagactcctactgcataatcccaa
gcagtttggactatacggattttccaagatgccgttcactgtaggatact
gagcagatatccaaaatgctgtgctatgctttgtggaagctcactagaat
agggatagacgaagggggtgtgcttcctaactcagttctgtcctatagag
aaatcagcatctagaaccaggcgctgagggtaaagaggaatgggaagaaa
gcagttccaggatggggaacctgggaaaggtggctgcacaggcctgcatc
ctaaggagtcagtgttgggtgaaactcgtccgtttctgggtttctagccg
tctgcatgtatgtggtgtccatgatcgagctgtatctgagtttgaggagt
ttctagtctaggagacagaaaacctgttttctcacaaatcgtcaatgcag
gccaggagccaattcttagatgtagacactttagccgcccgaaccagcct
gtgttcatcatggaggcgctgaaagcctggtgctaacagagctgcctcca
tactccccacactctggctccagcttggatgggagcaaggactccctgaa
agcacaaactagcacataaactcttgctccaagccacagcttctctccct
agggtcgccaagcctcacagatgtgggttacagttcttgagtctcctaac
ctacggtagtgggagagtctgaaaaatcccagatccatctttaaccgctc
actattcaagaacgctgcttactgtttatcggactgcttgtcttcctttg
aaaagtgtgcctgccctggcactgctaccttccgtttcctagggaccctc
attagtaacgtggcttctacatccattcatgaatagccaaagatgggtgg
ctaaaccttcttgagagggct
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggagtggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagttttggagctgagatg
aaaggatggaccatgtagagactgccatagccagggatccaccccataaa
tcagcatccaaacgctgacaccattgcatacactagcaagattttattga
aaggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaa
aacacagaagtggatgctcacagtcagctaatgggatggatcatagggct
tcccaatggaggaagctagaagaagtagccaaggagctaaagggaatctg
caacccttataggtggaacaacattatgagcttaccagtaccccggagct
cttgactctagctgcatatattatcaaaagatggccctagttggcccatc
acactggaaagaagaagggctccatattggaatcttgtcaaatctttata
aa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_120450658_120451763
seq2: B6Ng01-113F23.b_50_1170

seq1  GAATTCATGGATTAAGGCAAGCAAGGGTTTTGAACTTGGTCTCAGCTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGATTAAGGCAAGCAAGGGTTTTGAACTTGGTCTCAGCTAAG  50

seq1  GTTTACAGTAAAGGTAGGTGCTAAAAAGTCAGGAGTGTAGGTGCTAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACAGTAAAGGTAGGTGCTAAAAAGTCAGGAGTGTAGGTGCTAAAAA  100

seq1  GTCAGGAGTGTAGGTGCTAAAAGTCCGGACTGCTCAGTCTGCGAGCAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGAGTGTAGGTGCTAAAAGTCCGGACTGCTCAGTCTGCGAGCAGTG  150

seq1  TGAATAGTGTTCAGGGCACTCTAACTGGCCAGACTTCCTGAAGGAAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGTGTTCAGGGCACTCTAACTGGCCAGACTTCCTGAAGGAAGGAA  200

seq1  GCACAGACCTCTAAAGGGAGAGGGTTAAGACTCCTACTGCATAATCCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGACCTCTAAAGGGAGAGGGTTAAGACTCCTACTGCATAATCCCAA  250

seq1  GCAGTTTGGACTATACGGATTTTCCAAGATGCCGTTCACTGTAGGATACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTGGACTATACGGATTTTCCAAGATGCCGTTCACTGTAGGATACT  300

seq1  GAGCAGATATCCAAAATGCTGTGCTATGCTTTGTGGAAGCTCACTAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGATATCCAAAATGCTGTGCTATGCTTTGTGGAAGCTCACTAGAAT  350

seq1  AGGGATAGACGAAGGGGGTGTGCTTCCTAACTCAGTTCTGTCCTATAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATAGACGAAGGGGGTGTGCTTCCTAACTCAGTTCTGTCCTATAGAG  400

seq1  AAATCAGCATCTAGAACCAGGCGCTGAGGGTAAAGAGGAATGGGAAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGCATCTAGAACCAGGCGCTGAGGGTAAAGAGGAATGGGAAGAAA  450

seq1  GCAGTTCCAGGATGGGGAACCTGGGAAAGGTGGCTGCACAGGCCTGCATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTCCAGGATGGGGAACCTGGGAAAGGTGGCTGCACAGGCCTGCATC  500

seq1  CTAAGGAGTCAGTGTTGGGTGAAACTCGTCCGTTTCTGGGTTTCTAGCCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGAGTCAGTGTTGGGTGAAACTCGTCCGTTTCTGGGTTTCTAGCCG  550

seq1  TCTGCATGTATGTGGTGTCCATGATCGAGCTGTATCTGAGTTTGAGGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATGTATGTGGTGTCCATGATCGAGCTGTATCTGAGTTTGAGGAGT  600

seq1  TTCTAGTCTAGGAGACAGAAAACCTGTTTTCTCACAAATCGTCAATGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTCTAGGAGACAGAAAACCTGTTTTCTCACAAATCGTCAATGCAG  650

seq1  GCCAGGAGCCAATTCTTAGATGTAGACACTTTAGCCGCCCGAACCAGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGAGCCAATTCTTAGATGTAGACACTTTAGCCGCCCGAACCAGCCT  700

seq1  GTGTTCATCATGGAGGCGCTGAAAGCCTGGTGCTAACAGAGCTGCCTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCATCATGGAGGCGCTGAAAGCCTGGTGCTAACAGAGCTGCCTCCA  750

seq1  TACTCCCCACACTCTGGCTCCAGCTTGGATGGGAGCAAGGACT-CCTGAA  799
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TACTCCCCACACTCTGGCTCCAGCTTGGATGGGAGCAAGGACTCCCTGAA  800

seq1  AGCAC-AACTAGCACATAAACTCTTGCTCCAAGCCACAGCTTCTCTCCCT  848
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAAACTAGCACATAAACTCTTGCTCCAAGCCACAGCTTCTCTCCCT  850

seq1  AGGGTCGCC-AGCCTCACAGATGT-GGTTACAGTTC-TGAGTCTCCTAAC  895
      ||||||||| |||||||||||||| ||||||||||| |||||||||||||
seq2  AGGGTCGCCAAGCCTCACAGATGTGGGTTACAGTTCTTGAGTCTCCTAAC  900

seq1  CTACGGTAGTGGGAGAGTCTGAAAAAATCCCAGATCCATCTTTAACCGCT  945
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTACGGTAGTGGGAGAGTCTG-AAAAATCCCAGATCCATCTTTAACCGCT  949

seq1  CACTATCCAAGAAGGCTGC-TACTGTTTA-CCGACTGCTTGTC-TCCTTT  992
      |||||| |||||| ||||| ||||||||| | ||||||||||| ||||||
seq2  CACTATTCAAGAACGCTGCTTACTGTTTATCGGACTGCTTGTCTTCCTTT  999

seq1  G-AAAGTGTGCCTGCCCT-GCACTGCTACCTTCCGTTTCCTAGGGACACT  1040
      | |||||||||||||||| |||||||||||||||||||||||||||| ||
seq2  GAAAAGTGTGCCTGCCCTGGCACTGCTACCTTCCGTTTCCTAGGGACCCT  1049

seq1  CATTAGTAAACGTTGC-TCTACATCCAATTCATG-ATAG-CAAAGAT-GG  1086
      ||||||| ||||| || ||||||||| ||||||| |||| ||||||| ||
seq2  CATTAGT-AACGTGGCTTCTACATCC-ATTCATGAATAGCCAAAGATGGG  1097

seq1  TGGCTAAA-CTTCT---GAGGGCT  1106
      |||||||| |||||   |||||||
seq2  TGGCTAAACCTTCTTGAGAGGGCT  1121