BAC Information

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BAC

Clone NameB6Ng01-113I08
Chromosome7 (Build37)
Map Location 145,556,797 - 145,702,601
singlet/doubletdoublet
Overlap geneTcerg1l
Upstream gene9430038I01Rik, Txnl2, LOC435235
Downstream geneLOC100043290, Mapk1ip1, Ppp2r2d, Bnip3, EG668784, LOC669185, 6330417G02Rik, Dpysl4, Stk32c, LOC100038956, Lrrc27, Pwwp2, Inpp5a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113I08.bB6Ng01-113I08.g
ACCDH919294DH919295
length1,1291,097
definitionDH919294|Mus musculus domesticus DNA, BAC clone: B6Ng01-113I08, 5' end.DH919295|Mus musculus domesticus DNA, BAC clone: B6Ng01-113I08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(145,701,460 - 145,702,601)(145,556,797 - 145,557,894)
sequence
gaattcagcctccagaatctacagccagtgccttgggattggacatcact
tcccagactccagatactcctgtcatgacctttaaatggtcacttgagct
gcatcactggagccagccctggctctatgccttttgattgaaaaacatgg
ctactctgacacactgctccactgagtttgccaggcaacccgtagtcttc
cctgctaggttctcgaagccccagtagatgaccaccctgtgatattgttc
acagctacctcagagtccccattccactcaccatgcattttttcctatgg
gctcttctatttcatagttccacctctgccagcaccttctggtagcccct
acagggagtctgggctcttgtcctctctgtactcttcaaagcctttccca
gaagcctgcttcattttctattcctctttgtagcaatcatctaaagcaaa
catgtcccaaaccaaactagccactactctaaaggttgagtctgattcct
cctttctttaaaatatatttttttctatttgaatacaacagcattcattc
ataatatgaaggaaaatatgacctgtgtcactaaaaagctggtggcactg
agagtgcagatagagagggaggggacaggagggctgaaggagagagaaag
gggacatagtccacagagaggacagagagctgtgaatcttgtctcaggcc
tgtgccatactaccccatgacttttagggctctgtctagttatatgtcaa
ctttgactcaagctaaagtcatttgagaggggggaacttcatttcaaaag
ttgcctgcataagatcaggctgtaggcaggcaaggttgtatggcattttc
ttagtgattgatagggaagggcttagccctgagctagtggctcttcgttt
tgtaagaaagcaggatgagcaatccatgaggaacagccataggaaagttt
ctccatggcttctgcatcattttcccacgttcaggtcccagtacatctta
gtttctcttgtcttctctcaggggaatattataagacataaaagccaaat
aacccctttcctcctctattgctttttggtatagtatttacacagcaaag
aaacccttactaagacctaacctagtaac
gaattcatttcgcttcttacaaaattgcacctcctgccaatgtgttcatg
atatctgtcaagttccagtggtaacagaaagttaacaaacagcatggaca
gctcctggcataacaccataatggagggcaatatcttttgcccacagccc
cagagggtttggtccattcacatcagggagggcgtggtaaagtagtttgc
atcagcactgacaggaggcagaaggaagactgtacagaactaggccatgc
caggcatgggcccctagctcctccaagtagactctgccttccccattcac
tacttaccagtaatgtggtcccacggtgagcccatccagaaattcatcta
tgcatctatctgagcttttacgacctaatcacctgtagaaggcctctcag
acattccccctccccgcaacaggagatcctttattaccacccacaatagt
tttcaatctaagcaagttcacaatcagactccacacacacatactggtgc
tctgtgacagggagatccacagtttacaatgcgtgggagaaaggatgaag
ctgctgttggcttctcctcctatctcatctcccagccctggatcacagca
gagcatctctgtgccaagctgcacacagctatgggactgaaagacggtat
gatggatgcaaggcatgaggcatcactggatacaaatagataaatgctgc
tgggtgcctgctgctttgagaacaccagccaggaaatgtgtggagccgag
agaacccggacgccaaccgcacccccatgagatctgcctcttcggctgag
tttggagtataagcaagcaagggctcaattacctgtgtcaactgataaat
aatgacaggaacttccttccccaaaggactttagaaatcccttagtggag
taaataatagtaagattaggataggtgcagcagaaaaacctgctaagcca
gcgatgagataagcagcaaagccatccattaaggattacttataaaagtc
atggtttaagcaaaccagtaattaactagggtgctttcttgaagcagagc
ctcatcttgattaggctcatcttcactgctgtgcacccttggttctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_145701460_145702601
seq2: B6Ng01-113I08.b_48_1176 (reverse)

seq1  GTTACTTAGGGTTAGTGTCTTAGTTAGGGTTTCTTTTGCTGTGATAAAAT  50
      ||||||   |||||| |||||||| |||||||| |||||||||   ||||
seq2  GTTACT--AGGTTAG-GTCTTAGTAAGGGTTTC-TTTGCTGTG--TAAAT  44

seq1  ACCATAACCAAAAAGCAATTTGGAGAGGAAAGGGGTTATTTGGCTTATAT  100
      || || |||||||||||| | |  |||||||||||||||||||||| |||
seq2  ACTAT-ACCAAAAAGCAA-TAGAGGAGGAAAGGGGTTATTTGGCTTTTAT  92

seq1  GTCTTTAATAATATTCCCCTGAGAGAAGACAAGGAGAAACTAAGATTGTA  150
      |||||  ||||||||||||||||||||||||| |||||||||||| ||||
seq2  GTCTT--ATAATATTCCCCTGAGAGAAGACAA-GAGAAACTAAGA-TGTA  138

seq1  CTGGGACCTGAACGTGGG-AAATGATGCAGAAGCCATGGAGAAACTTTTC  199
      |||||||||||||||||| |||||||||||||||||||||||||| ||||
seq2  CTGGGACCTGAACGTGGGAAAATGATGCAGAAGCCATGGAGAAAC-TTTC  187

seq1  CTATTGGCTTGTTCCTCATGGATTGCTCATCCTGCTTTCTTACAAAACGA  249
      ||| |||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTA-TGGC-TGTTCCTCATGGATTGCTCATCCTGCTTTCTTACAAAACGA  235

seq1  AGAGCCACTAGCTCAGGGCTAAGCCCTTCCCTATCAATCACTAAGAAAAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCACTAGCTCAGGGCTAAGCCCTTCCCTATCAATCACTAAGAAAAT  285

seq1  GCCATACAACCTTGCCTGCCTACAGCCTGATCTTATGCAGGCAACTTTTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATACAACCTTGCCTGCCTACAGCCTGATCTTATGCAGGCAACTTTTG  335

seq1  AAATTGAAGTTCCCCCCTCTCAAATGACTTTAGCTTGAGTC-AAGTTGAC  398
      ||| ||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAA-TGAAGTTCCCCCCTCTCAAATGACTTTAGCTTGAGTCAAAGTTGAC  384

seq1  ATATAACTAGACAGAGCCCT-AAAGTCATGGGGTAGTATGGCACAGGCCT  447
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATATAACTAGACAGAGCCCTAAAAGTCATGGGGTAGTATGGCACAGGCCT  434

seq1  GAGACAAGATTCACAGCTCTCTGTCCTCTCTGTGGACTATGTCCCCTTTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAAGATTCACAGCTCTCTGTCCTCTCTGTGGACTATGTCCCCTTTC  484

seq1  TCTCTCCTTCAGCCCTCCTGTCCCCTCCCTCTCTATCTGCACTCTCAGTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCTTCAGCCCTCCTGTCCCCTCCCTCTCTATCTGCACTCTCAGTG  534

seq1  CCACCAGCTTTTTAGTGACACAGGTCATATTTTCCTTCATATTATGAATG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAGCTTTTTAGTGACACAGGTCATATTTTCCTTCATATTATGAATG  584

seq1  AATGCTGTTGTATTCAAATAGAAAAAAATATATTTTAAAGAAAGGAGGAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGTTGTATTCAAATAGAAAAAAATATATTTTAAAGAAAGGAGGAA  634

seq1  TCAGACTCAACCTTTAGAGTAGTGGCTAGTTTGGTTTGGGACATGTTTGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACTCAACCTTTAGAGTAGTGGCTAGTTTGGTTTGGGACATGTTTGC  684

seq1  TTTAGATGATTGCTACAAAGAGGAATAGAAAATGAAGCAGGCTTCTGGGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGATGATTGCTACAAAGAGGAATAGAAAATGAAGCAGGCTTCTGGGA  734

seq1  AAGGCTTTGAAGAGTACAGAGAGGACAAGAGCCCAGACTCCCTGTAGGGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTTGAAGAGTACAGAGAGGACAAGAGCCCAGACTCCCTGTAGGGG  784

seq1  CTACCAGAAGGTGCTGGCAGAGGTGGAACTATGAAATAGAAGAGCCCATA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAGAAGGTGCTGGCAGAGGTGGAACTATGAAATAGAAGAGCCCATA  834

seq1  GGAAAAAATGCATGGTGAGTGGAATGGGGACTCTGAGGTAGCTGTGAACA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAATGCATGGTGAGTGGAATGGGGACTCTGAGGTAGCTGTGAACA  884

seq1  ATATCACAGGGTGGTCATCTACTGGGGCTTCGAGAACCTAGCAGGGAAGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCACAGGGTGGTCATCTACTGGGGCTTCGAGAACCTAGCAGGGAAGA  934

seq1  CTACGGGTTGCCTGGCAAACTCAGTGGAGCAGTGTGTCAGAGTAGCCATG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACGGGTTGCCTGGCAAACTCAGTGGAGCAGTGTGTCAGAGTAGCCATG  984

seq1  TTTTTCAATCAAAAGGCATAGAGCCAGGGCTGGCTCCAGTGATGCAGCTC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAATCAAAAGGCATAGAGCCAGGGCTGGCTCCAGTGATGCAGCTC  1034

seq1  AAGTGACCATTTAAAGGTCATGACAGGAGTATCTGGAGTCTGGGAAGTGA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGACCATTTAAAGGTCATGACAGGAGTATCTGGAGTCTGGGAAGTGA  1084

seq1  TGTCCAATCCCAAGGCACTGGCTGTAGATTCTGGAGGCTGAATTC  1142
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAATCCCAAGGCACTGGCTGTAGATTCTGGAGGCTGAATTC  1129

seq1: chr7_145556797_145557894
seq2: B6Ng01-113I08.g_69_1164

seq1  GAATTCATTTCGCTTCTTACAAAATTGCACCTCCTGCCAATGTGTTCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCGCTTCTTACAAAATTGCACCTCCTGCCAATGTGTTCATG  50

seq1  ATATCTGTCAAGTTCCAGTGGTAACAGAAAGTTAACAAACAGCATGGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTGTCAAGTTCCAGTGGTAACAGAAAGTTAACAAACAGCATGGACA  100

seq1  GCTCCTGGCATAACACCATAATGGAGGGCAATATCTTTTGCCCACAGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTGGCATAACACCATAATGGAGGGCAATATCTTTTGCCCACAGCCC  150

seq1  CAGAGGGTTTGGTCCATTCACATCAGGGAGGGCGTGGTAAAGTAGTTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGTTTGGTCCATTCACATCAGGGAGGGCGTGGTAAAGTAGTTTGC  200

seq1  ATCAGCACTGACAGGAGGCAGAAGGAAGACTGTACAGAACTAGGCCATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCACTGACAGGAGGCAGAAGGAAGACTGTACAGAACTAGGCCATGC  250

seq1  CAGGCATGGGCCCCTAGCTCCTCCAAGTAGACTCTGCCTTCCCCATTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATGGGCCCCTAGCTCCTCCAAGTAGACTCTGCCTTCCCCATTCAC  300

seq1  TACTTACCAGTAATGTGGTCCCACGGTGAGCCCATCCAGAAATTCATCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACCAGTAATGTGGTCCCACGGTGAGCCCATCCAGAAATTCATCTA  350

seq1  TGCATCTATCTGAGCTTTTACGACCTAATCACCTGTAGAAGGCCTCTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTATCTGAGCTTTTACGACCTAATCACCTGTAGAAGGCCTCTCAG  400

seq1  ACATTCCCCCTCCCCGCAACAGGAGATCCTTTATTACCACCCACAATAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCCCCCTCCCCGCAACAGGAGATCCTTTATTACCACCCACAATAGT  450

seq1  TTTCAATCTAAGCAAGTTCACAATCAGACTCCACACACACATACTGGTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATCTAAGCAAGTTCACAATCAGACTCCACACACACATACTGGTGC  500

seq1  TCTGTGACAGGGAGATCCACAGTTTACAATGCGTGGGAGAAAGGATGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGACAGGGAGATCCACAGTTTACAATGCGTGGGAGAAAGGATGAAG  550

seq1  CTGCTGTTGGCTTCTCCTCCTATCTCATCTCCCAGCCCTGGATCACAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTTGGCTTCTCCTCCTATCTCATCTCCCAGCCCTGGATCACAGCA  600

seq1  GAGCATCTCTGTGCCAAGCTGCACACAGCTATGGGACTGAAAGACGGTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATCTCTGTGCCAAGCTGCACACAGCTATGGGACTGAAAGACGGTAT  650

seq1  GATGGATGCAAGGCATGAGGCATCACTGGATACAAATAGATAAATGCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGATGCAAGGCATGAGGCATCACTGGATACAAATAGATAAATGCTGC  700

seq1  TGGGTGCCTGCTGC-TTGAGAACACCAGCCAGGAAATGTGTGGAGCCGAG  749
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TGGGTGCCTGCTGCTTTGAGAACACCAGCCAGGAAATGTGTGGAGCCGAG  750

seq1  AGAACCCGGACGCCAACCGCACCCCCATGAGATCTGCCTC-TCGGCTGAG  798
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGAACCCGGACGCCAACCGCACCCCCATGAGATCTGCCTCTTCGGCTGAG  800

seq1  TTTGGAGTATAAGCAAGCAAGGGCTCAATTACCTGTGTCAACTGATAAAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGTATAAGCAAGCAAGGGCTCAATTACCTGTGTCAACTGATAAAT  850

seq1  AATGACAGGAACTTCCTTTCCCCAAAGGACTTTAGAAAATCCCTTAGTGG  898
      |||||||||||||||| |||||||||||||||||| ||||||||||||||
seq2  AATGACAGGAACTTCC-TTCCCCAAAGGACTTTAG-AAATCCCTTAGTGG  898

seq1  AGTAAATAAATAGTAAGA-TAAGATAGGTGCAGCCAGAAAAACCTGCTAA  947
      ||||||| |||||||||| || ||||||||||| ||||||||||||||||
seq2  AGTAAAT-AATAGTAAGATTAGGATAGGTGCAG-CAGAAAAACCTGCTAA  946

seq1  GCCAGCGAAGAGATAAGCCAGCAAAGCCATCCCATAAGGATTACTTATAA  997
      |||||||| |||||||| ||||||||||||||  ||||||||||||||||
seq2  GCCAGCGATGAGATAAG-CAGCAAAGCCATCCATTAAGGATTACTTATAA  995

seq1  AAGTCAATGTTTTAAGCAAACCAGTAATTAACTA-GGTGCTTCCTTGAAA  1046
      ||||| ||| |||||||||||||||||||||||| ||||||| |||| ||
seq2  AAGTC-ATGGTTTAAGCAAACCAGTAATTAACTAGGGTGCTTTCTTG-AA  1043

seq1  GCAAGAGCCTCATC-TGTATAGGCTCAACTTCAGCTGCTG-CCACCCTT-  1093
      || ||||||||||| ||  |||||||| ||||| ||||||  ||||||| 
seq2  GC-AGAGCCTCATCTTGATTAGGCTCATCTTCA-CTGCTGTGCACCCTTG  1091

seq1  GTTCT  1098
      |||||
seq2  GTTCT  1096