BAC Information

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BAC

Clone NameB6Ng01-113J12
Chromosome7 (Build37)
Map Location 151,150,874 - 151,152,002
singlet/doubletsinglet
Overlap genenone
Upstream geneAscl2, Tspan32, R74862, Cd81, Tssc4, Trpm5, Kcnq1, Cdkn1c, Slc22a18, Phlda2, Nap1l4, Cars, Tnfrsf26, Tnfrsf22, Tnfrsf23, Osbpl5, Mrgprg, Mrgpre, Nadsyn1, Dhcr7, Gm498
Downstream geneShank2, Cttn, Ppfia1, Fadd, Tmem16a, LOC669079, LOC677315, Fgf3, Fgf4, Fgf15, Oraov1, Ccnd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113J12.bB6Ng01-113J12.g
ACCDH919348DH919349
length1,1861,121
definitionDH919348|Mus musculus domesticus DNA, BAC clone: B6Ng01-113J12, 5' end.DH919349|Mus musculus domesticus DNA, BAC clone: B6Ng01-113J12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgatcgtgagcccactgtcgtacttctctggctgtgaaatga
gttccttggtcagaagcaatactgtgtggaataccatgacgatagatgag
gcattctgtcagtccgtgaatggtggttttagcagaggcattacgtgcag
gaaaggcaaatccataaccagaataagtatctactccagtaagaacaaaa
cgctgtcctttccacgaaggaagtggtccaatgtagtcaacctgccacca
ggttgctggctggtcacctcgaggaatggtgccatatctggggctcagtg
ttggtttctgctgttggcagatctggcaatcagcagcagcagtagccagg
tcagctttggtgagtggaagcccgtgttgctgagcccaagcataacctcc
atctcgaccaccatgaccactttgttcatgtacccattgagcaatgacag
ggatggctggggagagaggctgactgtccacagaacgggtcatcttatcc
acttgattattgaactcctcctcggctgaagtcaccttttggtgagcatt
tacatgggacacaaatatcttcacatcctttgcccatttggagagatcta
tccacatacttcttccccagatgtctttctcaccaattttccaattgtga
tctttccaagtccctgaccatccagccaatccattggctacagcccatga
gtcagtgaataatcgtacatctggccactttcttcttacaaacaaactgt
aataccatgtgtactgcccgaagttctgcccactgtgaagatttcccttc
acctgtgtctttcaaggttgtcccagaaaggggttgtaatgctgcagctg
tccacttctgggtggtgcctgcataacgtgcagagccatcagtaaaccag
gctctagtcttcttcctcttcggtcagttgatcaatagggaacaccccat
gaggctatagtgcatgcttggcagcagatggcattgtaacaggagtagaa
accataggcatttgagcacttctcatgtaacttgctagtgccttcaggac
ttgctctgggcccgatcacgtataacactttcatttgaatatggactggc
tgctgggtgcacgttccacttattgactttgcaagtcggataagtaccca
gctcatgtgatgggttatactagtgtcgcataggtt
gaattctgtgttcagaatggggaaaggccgagaaacagatggcatggtct
tagagttgtcacagtgagaccagaaagcatcttcaggaggactagacctt
cgtgatgaccccactttcagatggatagtccagacaaaacatctgccctc
ccgaagttcctgctgccctcctgcatcaagaagataggggctgggttgac
aaggggactgtttgggcaaaggtgcttgcttccaagcctgataaagtctg
agtttggtccctcggacccatatggtggaagacacaagccaactcttgct
tccacatgcttataaacccacatacccctccctcaatacaaaataaataa
attatttttttaaaagatgggactattaaacccgtgctcctgaagctcca
gctatgaagtccacagtactggcactcccaggtgtaacaagcatcctgcc
ttggtacggccattgccatcaggacgagccttggggcagcagctggatct
tctaagcctcaggttctttgttttgaaaaacgagtctttctgaacaatcc
tgggactctagagtgatccaaaaaggtgatatgtgtaaaacatacttacc
agacattccaataggtgggtcttgcttaactattaacattattattaagg
ccaagcatgatagtacatgcctgtaatcccagctccaggaaggcagaggc
aggagatcacttcaagttccaggctagcctgggttacttagtgagatcct
gcctcagaaaaaaataaagtcattgtcataggctgtcatgatgcctgagt
ggccaaagaggcttgctactaagcctcacattcctgagttcaagtcccag
gacctacacggtggaaagagagaatggactcctacaagttgctctttgac
ctctataaatatactgcgacatgcctggtgtcccacacatacatattcaa
attaataaatgtaaagaagtttagaatcattatatatattcatagtatga
attatattctacccaccgaatcaatccaaaagagacaattaggagcaaat
ttaagaaatactattggctcgtagtaagaagcttgctgctccttgccaga
accttggtttggttttcagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_151150874_151152002
seq2: B6Ng01-113J12.g_71_1191 (reverse)

seq1  TGCTGGAAACCAAACCCAGGTTCTCTGCAGGAGCAGCAAGGCCTCTTAAC  50
      ||||| |||||||||| |||||||    ||||||||||| || |||| ||
seq2  TGCTGAAAACCAAACCAAGGTTCTGGCAAGGAGCAGCAA-GCTTCTT-AC  48

seq1  TACCGAGCCACTAGTATTTCTTTAAAATTTGCTCCTAATTGT-TCTTTTG  99
      || ||||||| |||||||||||  |||||||||||||||||| |||||||
seq2  TA-CGAGCCAATAGTATTTCTT--AAATTTGCTCCTAATTGTCTCTTTTG  95

seq1  GATTTGATCTGTTGTGTTAGAATATAATTCATACTATGAATATATAATAA  149
      || |||||  | || | |||||||||||||||||||||||||||| ||||
seq2  GA-TTGATTCGGTG-GGTAGAATATAATTCATACTATGAATATAT-ATAA  142

seq1  TGATTCTTAAACTTCTTTACATTTATTTATTTTGAATATGTATGTGTGTG  199
      |||||| |||||||||||||||||| ||| |||||||||||||||||| |
seq2  TGATTC-TAAACTTCTTTACATTTA-TTAATTTGAATATGTATGTGTG-G  189

seq1  GACA-CAGGCATGTCGCAGTATATTTATAGAGGTCAAAGAGCAACTTGTA  248
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCAGGCATGTCGCAGTATATTTATAGAGGTCAAAGAGCAACTTGTA  239

seq1  GGAGTCCATTCTCTCTTTCCACCGTGTAGGTCCTGGGACTTGAACTCAGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCCATTCTCTCTTTCCACCGTGTAGGTCCTGGGACTTGAACTCAGG  289

seq1  -ATGTGAGGCTTAGTAGCAAGCCTCTTTGGCCACTCAGGCATCATGACAG  347
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGAGGCTTAGTAGCAAGCCTCTTTGGCCACTCAGGCATCATGACAG  339

seq1  CCTATGACAATGACTTTATTTTTTTCTGAGGCAGGATCTCACTAAGTAAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGACAATGACTTTATTTTTTTCTGAGGCAGGATCTCACTAAGTAAC  389

seq1  CCAGGCTAGCCTGGAACTTGAAGTGATCTCCTGCCTCTGCCTTCCTGGAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTAGCCTGGAACTTGAAGTGATCTCCTGCCTCTGCCTTCCTGGAG  439

seq1  CTGGGATTACAGGCATGTACTATCATGCTTGGCCTTAATAATAATGTTAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATTACAGGCATGTACTATCATGCTTGGCCTTAATAATAATGTTAA  489

seq1  TAGTTAAGCAAGACCCACCTATTGGAATGTCTGGTAAGTATGTTTTACAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAAGCAAGACCCACCTATTGGAATGTCTGGTAAGTATGTTTTACAC  539

seq1  ATATCACCTTTTTGGATCACTCTAGAGTCCCAGGATTGTTCAGAAAGACT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCACCTTTTTGGATCACTCTAGAGTCCCAGGATTGTTCAGAAAGACT  589

seq1  CGTTTTTCAAAACAAAGAACCTGAGGCTTAGAAGATCCAGCTGCTGCCCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTTTCAAAACAAAGAACCTGAGGCTTAGAAGATCCAGCTGCTGCCCC  639

seq1  AAGGCTCGTCCTGATGGCAATGGCCGTACCAAGGCAGGATGCTTGTTACA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTCGTCCTGATGGCAATGGCCGTACCAAGGCAGGATGCTTGTTACA  689

seq1  CCTGGGAGTGCCAGTACTGTGGACTTCATAGCTGGAGCTTCAGGAGCACG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGAGTGCCAGTACTGTGGACTTCATAGCTGGAGCTTCAGGAGCACG  739

seq1  GGTTTAATAGTCCCATCTTTTAAAAAAATAATTTATTTATTTTGTATTGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAATAGTCCCATCTTTTAAAAAAATAATTTATTTATTTTGTATTGA  789

seq1  GGGAGGGGTATGTGGGTTTATAAGCATGTGGAAGCAAGAGTTGGCTTGTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGGTATGTGGGTTTATAAGCATGTGGAAGCAAGAGTTGGCTTGTG  839

seq1  TCTTCCACCATATGGGTCCGAGGGACCAAACTCAGACTTTATCAGGCTTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCACCATATGGGTCCGAGGGACCAAACTCAGACTTTATCAGGCTTG  889

seq1  GAAGCAAGCACCTTTGCCCAAACAGTCCCCTTGTCAACCCAGCCCCTATC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAAGCACCTTTGCCCAAACAGTCCCCTTGTCAACCCAGCCCCTATC  939

seq1  TTCTTGATGCAGGAGGGCAGCAGGAACTTCGGGAGGGCAGATGTTTTGTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGATGCAGGAGGGCAGCAGGAACTTCGGGAGGGCAGATGTTTTGTC  989

seq1  TGGACTATCCATCTGAAAGTGGGGTCATCACGAAGGTCTAGTCCTCCTGA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTATCCATCTGAAAGTGGGGTCATCACGAAGGTCTAGTCCTCCTGA  1039

seq1  AGATGCTTTCTGGTCTCACTGTGACAACTCTAAGACCATGCCATCTGTTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTTTCTGGTCTCACTGTGACAACTCTAAGACCATGCCATCTGTTT  1089

seq1  CTCGGCCTTTCCCCATTCTGAACACAGAATTC  1129
      ||||||||||||||||||||||||||||||||
seq2  CTCGGCCTTTCCCCATTCTGAACACAGAATTC  1121