BAC Information

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BAC

Clone NameB6Ng01-113J21
Chromosome7 (Build37)
Map Location 70,271,677 - 70,272,436
singlet/doubletsinglet
Overlap geneChrna7
Upstream geneNdn, Magel2, Mkrn3, Peg12, Atp5l-ps1, EG665038, LOC669222, LOC384631, LOC622243, EG622251
Downstream geneOtud7a, LOC545971, LOC100041386, LOC665083, Klf13, E030018B13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113J21.bB6Ng01-113J21.g
ACCDH919366DH919367
length1,1841,084
definitionDH919366|Mus musculus domesticus DNA, BAC clone: B6Ng01-113J21, 5' end.DH919367|Mus musculus domesticus DNA, BAC clone: B6Ng01-113J21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaatagaccttcaaagaagaactaactaataatttacgtattcc
ttaaattattctacgaaatagaaagaaaaattttatattctttttatgga
gccaggaataccctgattataaagccaaattctcaacaacagcaaaaaga
atataataggccattatctttgataactatcaatgtaataattctcaacc
aaatacttataaataaattcaagaacccattataaagattatgtaggcac
ttccggtccactccagcaccggggtgccttgccagcagagtctcccgaca
cccacaagggcccacacaggattccccatgggattctaagacctctggtg
agtggaacacagtgtctgccccaatccaatctctcggaacctgagactgc
agtaactagggaagcagacggcccgggcctgacctggggcacaagtccct
tctgctccactcgagcaccagggtgccttgccagcagagtcgcccaacac
ccgcaagggcccacacaggattccccatgggatcctaaaacctctggtga
gtggaacacaacttctgccaggaggcaggttcgaacaccagatatctggg
taccttccctgcaagaagagagcttgcctgcagagaatactctgcccgct
gaaactaagcagagagctagcctcccaggtctgcttatagaggctaacag
agtcacctgaggaacaagctctaaccagagacaactataacagctagctt
cagagattaccagatggcgaaaggcaaaggtaagaatcctactaatagaa
atcaagaccactcactatcatcagaacgcagcactcccaccccacctagt
cctgggcaccccaacacaaccgaaaatctagacccagatttaaaacattt
ctcatgatgatggtagaggacatcaagaagactttcataactcacttaaa
gaaatacaaggagagcactgcttaagagtacaggccctttaaagaaaagc
aggaaataacaaccaaaacagggagaagtccttaaagaaaacagggaaaa
cacatccaaacaggtgatggaaatgaacaaaaccatacctagaactaaaa
ggaggtggactcaattagaaatctaagcgaagcacaccttgagattagaa
accccttaggaaaaaaagatcgggtgaaccttag
gaattctgaaattctctgagatggctttgaaaatcactcccataacaatg
tgctgtaaagcaatgaggagtgtccctgaaatgaaggagaaggagacgtt
ctcagcaagaaatagtagatacaaaagaagctcagtggaaaactggaact
gaaaaatagagtaactggggctagaaaacacacaggcaaggcttggtggc
agagcagagagaggcacagagagaataggtgtcttgaaggtggaatggaa
attatccagtatgaaccataaggtcaaagaaaaaaaggtaccttagaaaa
tgataaagcttacagcgaatgttaacatgataatgaaagacctagaggta
tttgtattgagtctcagaaacaaaagaatgtgaaagaagatggagagtgt
aaagtatttgaggaaacaatgactaaaaacattctcaaatttagcaaact
attttaatctagagttaagaggctgagtagagcctaagaggaacccagaa
gacatcagaccactactcatcatgatcaaacacctgaaaactgactgaaa
agagaatcttagcgtagcagcaggtagaacatagaaggcagggaaaaacc
aatgagctgagacatgaggcattatcagagagcagaagcaggtgcacaaa
tgtgcctcaagtgctgagagggaaggactcagcacaggactctgtccctg
gagataccttcagggaacatgaagaaatgcagagaaaaactcagtaagct
gttaaccaggaaaatcactttgggagaaaaatgactcaaggaagttcttg
aaaagagaaaataaagaaagaagacaatattcttgtatttaaactagcaa
gaaatactaataccactataccacaaaatcttatctatatgtaacaggaa
atatctaaaacaaatgaaacaaacaaacaacgaaaaaaactgcactagga
cagataaacaagaagatactctcaaaacattatacaaatttcccatttaa
aataaatgttagtttatcccataggaaggaaggcaagtagatgaaagaac
ggattgaaaccatatattattagtaaaatgacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_70271677_70272436
seq2: B6Ng01-113J21.g_394_1153

seq1  ACATGATAATGAAAGACCTAGAGGTATTTGTATTGAGTCTCAGAAACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGATAATGAAAGACCTAGAGGTATTTGTATTGAGTCTCAGAAACAAA  50

seq1  AGAATGTGAAAGAAGATGGAGAGTGTAAAGTATTTGAGGAAACAATGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTGAAAGAAGATGGAGAGTGTAAAGTATTTGAGGAAACAATGACT  100

seq1  AAAAACATTCTCAAATTTAGCAAACTATTTTAATCTAGAGTTAAGAGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACATTCTCAAATTTAGCAAACTATTTTAATCTAGAGTTAAGAGGCT  150

seq1  GAGTAGAGCCTAAGAGGAACCCAGAAGACATCAGACCACTACTCATCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGAGCCTAAGAGGAACCCAGAAGACATCAGACCACTACTCATCATG  200

seq1  ATCAAACACCTGAAAACTGACTGAAAAGAGAATCTTAGCGTAGCAGCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAACACCTGAAAACTGACTGAAAAGAGAATCTTAGCGTAGCAGCAGG  250

seq1  TAGAACATAGAAGGCAGGGAAAAACCAATGAGCTGAGACATGAGGCATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACATAGAAGGCAGGGAAAAACCAATGAGCTGAGACATGAGGCATTA  300

seq1  TCAGAGAGCAGAAGCAGGTGCACAAATGTGCCTCAAGTGCTGAGAGGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAGCAGAAGCAGGTGCACAAATGTGCCTCAAGTGCTGAGAGGGAA  350

seq1  GGACTCAGCACAGGACTCTGTCCCTGGAGATACCTTCAGGGAACATGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCAGCACAGGACTCTGTCCCTGGAGATACCTTCAGGGAACATGAAG  400

seq1  AAATGCAGAGAAAAACTCAGTAAGCTGTTAACCAGGAAAATCACTTT-GG  449
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAATGCAGAGAAAAACTCAGTAAGCTGTTAACCAGGAAAATCACTTTGGG  450

seq1  AGAAAAATGACTCAAGGAAGTTCTTGAAAAGAGAAAATAAAGAAAGAAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATGACTCAAGGAAGTTCTTGAAAAGAGAAAATAAAGAAAGAAGA  500

seq1  CAATATTCTTGTATTTAAACTAGCAAGAAATACTAATACCACTATACCAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTCTTGTATTTAAACTAGCAAGAAATACTAATACCACTATACCAC  550

seq1  AAAATCTTATCTATATGTAACAGGAAATATCTAAAACAAAATGAAACAAA  599
      ||||||||||||||||||||||||||||||||||||| ||||||||| ||
seq2  AAAATCTTATCTATATGTAACAGGAAATATCTAAAAC-AAATGAAAC-AA  598

seq1  ACAAACAAACGAAAAAAACTGCACTAGGACAGATAAACAAAGAGATACTC  649
      |||||| |||||||||||||||||||||||||||||||||  ||||||||
seq2  ACAAAC-AACGAAAAAAACTGCACTAGGACAGATAAACAAGAAGATACTC  647

seq1  TCAAAACATTATACAAA-TTCCCATTTAAAATAAATGTTAGGTTATCCCA  698
      ||||||||||||||||| ||||||||||||||||||||||| ||||||||
seq2  TCAAAACATTATACAAATTTCCCATTTAAAATAAATGTTAGTTTATCCCA  697

seq1  TAGGAAGGAAGGCAAAGTAGATGAAAGAACGGAATGAAA-CATATATATA  747
      ||||||||||||| ||||||||||||||||||| ||||| ||||||| ||
seq2  TAGGAAGGAAGGC-AAGTAGATGAAAGAACGGATTGAAACCATATAT-TA  745

seq1  GTA--AAAATGACTA  760
       ||  ||||||||||
seq2  TTAGTAAAATGACTA  760