BAC Information

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BAC

Clone NameB6Ng01-113K02
Chromosome7 (Build37)
Map Location 33,995,562 - 34,028,476
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857
Downstream geneEG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962, EG626970, LOC100043859, LOC627004, LOC100043398, LOC100043401, Scgb2b1, LOC668440, Abpz, LOC100043860, LOC627079, LOC635803, Abpg, LOC100043864, LOC100043865, Abpb, Abpa, LOC100043866, LOC100043867, LOC100043868, Wtip, Sae2, LOC100043410, Pdcd2l, Gpi1, 4931406P16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113K02.bB6Ng01-113K02.g
ACCDH919376DH919377
length677967
definitionDH919376|Mus musculus domesticus DNA, BAC clone: B6Ng01-113K02, 5' end.DH919377|Mus musculus domesticus DNA, BAC clone: B6Ng01-113K02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,027,945 - 34,028,476)(33,995,562 - 33,996,527)
sequence
gaattcttctgtaagttgtaagaacacagtctttcattcatgttcatttt
ttttcaaaatgttattatatattttcatcatttatatttccaatgtcatc
caaaaagtcacccatacccgcctgcccagtcccctagtcacccactccta
catcttggccctggcattcccttgtactgaggcatatatgcctcttttga
gagatatctgggttctttccagcttctggacattataaataaggctgcta
tgaacatagtgaagcacatgtccttcttatcatttggaacatcttctgga
tatatgcccagcaggggtattgtggggttctatggtagttctatgtccaa
ttttctgaggaacagcatgactgatttccagagtgtttgtacgagctagc
aatccaaacaacattggaggagtctttctctttctccacatcctcaccag
catctactgtcacctgaattttttatcttaacagtgctgactggtgtgag
gtggaatctcaggattgttttgatttgcatttccctgatgattgagcatg
cacaacatttttcaggtgcttcttagccattcagtattcctcaggtgaga
attctttgtttagccctgagcctcattttttaatggggttattggtatag
gtttctatccacatcctctgctctatc
gaattccatagttttagaagagagtggagagaaacattcagcatgagcaa
atatcattggtggaaggctgaaggtgctgaaatacctcatagcatgggga
gtaatttcaggaatctcaggtgctacatgaatggattcttatcagaagga
agtagaacttacaatcttaaccatggatatgtggaattatgcaagtagac
gtttgggtgaagtttgaattcccaagacaaaggtcagaaaatgaaaagca
actccaatgaatggagatctccatcttgcactgagccccagaaagctagc
acaaatttcgtatactttgtacttatttagaaaagcagcatataccaatc
caactatagctccagttccactgaatctgatggcctctcttttcttctac
agtccacaagcatcaaattgtgcacatatatacatgctggggaaacacct
gtacacaaaaataaattaataaaaataataaagaaatattccaaagcata
ctttagaaatgagtaaatttctaaggaaatttactagacagttaaaacag
cttaccagattcactgtgatctgtagtttcactcattttctgcaaatgga
ataattttctcattcatggttaacagaagtaaatagtgtaggcatgtcat
gtcttaacagtgcttaaatcagactcagaatgacaaacactgaatgattt
agctcaggtatggacccttgatgctgcaaacacacacacacaaatgtgga
aagacttcaggagactaggctctggaaagtggtgagagaagcagacaact
ggtaaatattttccaaacatttgtgattgtttgagtgtaaatgcaagttg
ccctgtaaagggggtggattactgtttctgctagcataggtgggtatcct
ggaactaggaagcctaggaaccatagggaaaatgtatcccaggggaaagc
atcctgagatatggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_34027945_34028476
seq2: B6Ng01-113K02.b_192_723 (reverse)

seq1  GATAGAACAGAGGATGTGGATAGAAACCTATACCAATAACCCCATT-AAA  49
      |||||| ||||||||||||||||||||||||||||||||||||||| |||
seq2  GATAGAGCAGAGGATGTGGATAGAAACCTATACCAATAACCCCATTAAAA  50

seq1  AATGAGGCTCAGGGCTAAACAAAGAATTCTCACCTGAGGAATACCGAATG  99
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AATGAGGCTCAGGGCTAAACAAAGAATTCTCACCTGAGGAATACTGAATG  100

seq1  GCTAAGAAGCACCTGAAAAAATGTTGAGCATGCTCAATCATCAGGGAAAT  149
      ||||||||||||||| |||||||||| |||||||||||||||||||||||
seq2  GCTAAGAAGCACCTG-AAAAATGTTGTGCATGCTCAATCATCAGGGAAAT  149

seq1  GCAAATCAAAACAATCCTGACATTCCACCTCACACCAGTCAACACTGCTA  199
      |||||||||||||||||||| |||||||||||||||||||| ||||| ||
seq2  GCAAATCAAAACAATCCTGAGATTCCACCTCACACCAGTCAGCACTGTTA  199

seq1  AGATCAAAAATTCAGGTGACAGTAGATGCTGGCGAGGATGTGGAGAAAGA  249
      |||| ||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGATAAAAAATTCAGGTGACAGTAGATGCTGGTGAGGATGTGGAGAAAGA  249

seq1  GAAAGACTCCTCCAATATATTTTGGATTGAAAGCTAATACAACTACTCTG  299
      |||||||||||||||| |  |||||||||  ||||  |||||  ||||||
seq2  GAAAGACTCCTCCAATGTTGTTTGGATTGCTAGCTCGTACAAACACTCTG  299

seq1  GAAATCAGTCAGGCTGTTCCTCAGAAAACAGGACATAGAACTACCATAGA  349
      ||||||||||| ||||||||||||||||  ||||||||||||||||||||
seq2  GAAATCAGTCATGCTGTTCCTCAGAAAATTGGACATAGAACTACCATAGA  349

seq1  ACCCCACAATACCCCTGCTGGGCTTATATCCAGAAGATCTTCCAAATGGT  399
      ||||||||||||||||||||||| |||||||||||||| ||||||||| |
seq2  ACCCCACAATACCCCTGCTGGGCATATATCCAGAAGATGTTCCAAATGAT  399

seq1  AAGAAGGACACGTGCTTCACTAAGTTCATAGCAGCCTTATTTATAATGTC  449
      |||||||||| ||||||||||| |||||||||||||||||||||||||||
seq2  AAGAAGGACATGTGCTTCACTATGTTCATAGCAGCCTTATTTATAATGTC  449

seq1  CAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAGAGGCATATATGCCTC  499
      ||||||||||||||||||||||| || ||||| |||||||||||||||||
seq2  CAGAAGCTGGAAAGAACCCAGATATCTCTCAAAAGAGGCATATATGCCTC  499

seq1  AGTACAAGGGAATGCCAGGGACAAGATGTAGGA  532
      |||||||||||||||||||| ||||||||||||
seq2  AGTACAAGGGAATGCCAGGGCCAAGATGTAGGA  532

seq1: chr7_33995562_33996527
seq2: B6Ng01-113K02.g_69_1035

seq1  GAATTCCATAGTTTTAGAAGAGAGTGGAGAGAAACATTCAGCATGAGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAGTTTTAGAAGAGAGTGGAGAGAAACATTCAGCATGAGCAA  50

seq1  ATATCATTGGTGGAAGGCTGAAGGTGCTGAAATACCTCATAGCATGGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATTGGTGGAAGGCTGAAGGTGCTGAAATACCTCATAGCATGGGGA  100

seq1  GTAATTTCAGGAATCTCAGGTGCTACATGAATGGATTCTTATCAGAAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTCAGGAATCTCAGGTGCTACATGAATGGATTCTTATCAGAAGGA  150

seq1  AGTAGAACTTACAATCTTAACCATGGATATGTGGAATTATGCAAGTAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAACTTACAATCTTAACCATGGATATGTGGAATTATGCAAGTAGAC  200

seq1  GTTTGGGTGAAGTTTGAATTCCCAAGACAAAGGTCAGAAAATGAAAAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGGTGAAGTTTGAATTCCCAAGACAAAGGTCAGAAAATGAAAAGCA  250

seq1  ACTCCAATGAATGGAGATCTCCATCTTGCACTGAGCCCCAGAAAGCTAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAATGAATGGAGATCTCCATCTTGCACTGAGCCCCAGAAAGCTAGC  300

seq1  ACAAATTTCGTATACTTTGTACTTATTTAGAAAAGCAGCATATACCAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATTTCGTATACTTTGTACTTATTTAGAAAAGCAGCATATACCAATC  350

seq1  CAACTATAGCTCCAGTTCCACTGAATCTGATGGCCTCTCTTTTCTTCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTATAGCTCCAGTTCCACTGAATCTGATGGCCTCTCTTTTCTTCTAC  400

seq1  AGTCCACAAGCATCAAATTGTGCACATATATACATGCTGGGGAAACACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCACAAGCATCAAATTGTGCACATATATACATGCTGGGGAAACACCT  450

seq1  GTACACAAAAATAAATTAATAAAAATAATAAAGAAATATTCCAAAGCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACAAAAATAAATTAATAAAAATAATAAAGAAATATTCCAAAGCATA  500

seq1  CTTTAGAAATGAGTAAATTTCTAAGGAAATTTACTAGACAGTTAAAACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGAAATGAGTAAATTTCTAAGGAAATTTACTAGACAGTTAAAACAG  550

seq1  CTTACCAGATTCACTGTGATCTGTAGTTTCACTCATTTTCTGCAAATGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCAGATTCACTGTGATCTGTAGTTTCACTCATTTTCTGCAAATGGA  600

seq1  ATAATTTTCTCATTCATGGTTAACAGAAGTAAATAGTGTAGGCATGTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTCTCATTCATGGTTAACAGAAGTAAATAGTGTAGGCATGTCAT  650

seq1  GTCTTAACAGTGCTTAAATCAGACTCAGAATGACAAACACTGAATGATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAACAGTGCTTAAATCAGACTCAGAATGACAAACACTGAATGATTT  700

seq1  AGCTCAGGTATGGACCCTTGATGCTGCAAACACACACACACAAATGTGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAGGTATGGACCCTTGATGCTGCAAACACACACACACAAATGTGGA  750

seq1  AAGACTTCAGGAGACTAGGCTCTGGAAAGTGGTGAGAGAAGCAGACAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTCAGGAGACTAGGCTCTGGAAAGTGGTGAGAGAAGCAGACAACT  800

seq1  GGTAAATATTTTCCAAACATTTGTGATTG-TTGAGTGTAAATGCAAGTTG  849
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGTAAATATTTTCCAAACATTTGTGATTGTTTGAGTGTAAATGCAAGTTG  850

seq1  CCATGTAGAGGGGGT-GATAACTGTTTCTGCTAGCATAGGTGGGTATCCT  898
      || |||| ||||||| ||| ||||||||||||||||||||||||||||||
seq2  CCCTGTAAAGGGGGTGGATTACTGTTTCTGCTAGCATAGGTGGGTATCCT  900

seq1  GGAACTAGGAAGCCTAGGAGCCATAGGGAAAATGTATCCCAGTGGAAAGG  948
      ||||||||||||||||||| |||||||||||||||||||||| ||||| |
seq2  GGAACTAGGAAGCCTAGGAACCATAGGGAAAATGTATCCCAGGGGAAA-G  949

seq1  CATCCTGAGACATGGGAG  966
      |||||||||| |||| ||
seq2  CATCCTGAGATATGGAAG  967