BAC Information

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BAC

Clone NameB6Ng01-113O21
Chromosome7 (Build37)
Map Location 53,069,982 - 53,070,557
singlet/doubletsinglet
Overlap genenone
Upstream geneAtf5, Nup62, Il4i1, Tbc1d17, Akt1s1, Pnkp, Ptov1, Med25, Fuz, Ap2a1, Stk22s1, Cpt1c, Prmt1, Bcl2l12, Irf3, AI480556, Rras, Prr12, Prrg2, Nosip, Rcn3, Fcgrt, Rps11, Rnu35b, Rpl13a, Rnu35a, Rnu34, Rnu33, Rnu32, Flt3l, Aldh16a1, Pih1d1, Slc17a7, Gm581, LOC100039953, Tifp39, BC050196, Dkkl1, Tead2, Cd37, Slc6a16, 1700039E15Rik, Trpm4, LOC100040970, Hrc, 2410127E16Rik, Mtag2, Lin7b, Snrp70, Kcna7, Ntf5, LOC100040019, Lhb, Ruvbl2, Gys1, Ftl1, Bax, Dhdh, Nucb1, Tulp2, Myd116, Plekha4, Hsd17b14, Bcat2, Fgf21, Fut1, Izumo1, Rasip1, 5430432N15Rik, Fut2, Sec1, Gm484, Car11, Dbp, Sphk2, Rpl18, 4930403C10Rik, Spaca4, Sult2b1, EG545963, Lmtk3, Pscd2
Downstream geneKcnj14, Grwd1, Grin2d, Kdelr1, Syngr4, Tmem143, Emp3, BC013491, LOC677321, Abcc6, Nomo1, Kcnj11, Abcc8, Ush1c, Otog, Myod1, Kcnc1, Sergef, Tph1, Saal1, Saa3, Saa4, LOC100040106, Saa1, Saa2, Hps5, Gtf2h1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113O21.bB6Ng01-113O21.g
ACCDH919592DH919593
length571367
definitionDH919592|Mus musculus domesticus DNA, BAC clone: B6Ng01-113O21, 5' end.DH919593|Mus musculus domesticus DNA, BAC clone: B6Ng01-113O21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
caggacagagaaaccctgtctcgaaaagaaaaaaaaaaggggggggggca
ggagtgtgggaactgaaaaggttgggtggaaggaggactttaagcacagg
gtcttggagagttgacagagtgccaggcagaagattctgaggaaaaaggg
gtgtcttgggagaatgcctggggaaggcaggattttaggaagaggaagct
aagagggagagtttaggaggaagagtcaccgcgcattcacggtacccaat
accataacatttggaagaaagaatgcttttatttaccatcctttgattct
gaggagatttgaggtatgtaggaaagtctcatgtagaggtatgaaaaggg
ttcagagatagcgacctgcagagaattaccctgagaaaggaggcaaaaag
accgacctgtgtggctcgcagttgcttggcaaccactgcggtcaaaagct
agcgtggagggccaggaggtgtggctcgagctgcaacccaaggttgagac
cccgcccttgacaacaaaactaacaaagcaccgccccctaacaacgaatg
cctgttgggggggggtggagt
ctagcaagttcctacagctaggaatacacaaagaaaccctatctcaaaaa
aataaaaagaaatgaaacaaaattaattaattaacaccaaactcaaagca
aaaaatcaaaaacaaaacaaaaacaaaaacaaaactcccaggaacaaatg
caataatatataagtataaaattattttagacggtaacctaaacaattaa
ttttaaaaaatttctggagggcctgaaaagatggctcgggggattaagaa
catgaccacagttcagtaaccagcttttacattgggctgctcacaactgg
aactcaggatacagaggatctggtgccctctgctggtcttcacaggcacc
tgcactcatgtgtacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_53069982_53070557
seq2: B6Ng01-113O21.b_50_625 (reverse)

seq1  CTCCACCCCCCCCCAACAGGCATTCGTTGTTAGGGGGCGGTGCTTTGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACCCCCCCCCAACAGGCATTCGTTGTTAGGGGGCGGTGCTTTGTTA  50

seq1  GTTTTGTTGTCAAGGGCGGGGTCTCAACCTTGGGTTGCAGCTCGAGCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTGTCAAGGGCGGGGTCTCAACCTTGGGTTGCAGCTCGAGCCAC  100

seq1  ACCTCCTGGCCCTCCACGCTAGCTTTTGACCGCAGTGGTTGCCAAGCAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCTGGCCCTCCACGCTAGCTTTTGACCGCAGTGGTTGCCAAGCAAC  150

seq1  TGCGAGCCACACAGGTCGGTCTTTTTGCCTCCTTTCTCAGGGTAATTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGAGCCACACAGGTCGGTCTTTTTGCCTCCTTTCTCAGGGTAATTCTC  200

seq1  TGCAGGTCGCTATCTCTGAACCCTTTTCATACCTCTACATGAGACTTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGTCGCTATCTCTGAACCCTTTTCATACCTCTACATGAGACTTTCC  250

seq1  TACATACCTCAAATCTCCTCAGAATCAAAGGATGGTAAATAAAAGCATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACCTCAAATCTCCTCAGAATCAAAGGATGGTAAATAAAAGCATTC  300

seq1  TTTCTTCCAAATGTTATGGTATTGGGTACCGTGAATGCGCGGTGACTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCCAAATGTTATGGTATTGGGTACCGTGAATGCGCGGTGACTCTT  350

seq1  CCTCCTAAACTCTCCCTCTTAGCTTCCTCTTCCTAAAATCCTGCCTTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTAAACTCTCCCTCTTAGCTTCCTCTTCCTAAAATCCTGCCTTCCC  400

seq1  CAGGCATTCTCCCAAGACACCCCTTTTTCCTCAGAATCTTCTGCCTGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATTCTCCCAAGACACCCCTTTTTCCTCAGAATCTTCTGCCTGGCA  450

seq1  CTCTGTCAACTCTCCAAGACCCTGTGCTTAAAGTCCTCCTTCCACCCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCAACTCTCCAAGACCCTGTGCTTAAAGTCCTCCTTCCACCCAAC  500

seq1  CTTTTCAGTTCCCACACTCCTGCCCCCCCCCCTTTTTTTTTTCTTTTCGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCAGTTCCCACACTCCTGCCCCCCCCCCTTTTTTTTTTCTTTTCGA  550

seq1  GACAGGGTTTCTCTGTCCTGGAATTC  576
      ||||||||||||||||||||||||||
seq2  GACAGGGTTTCTCTGTCCTGGAATTC  576