BAC Information

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BAC

Clone NameB6Ng01-114C02
Chromosome7 (Build37)
Map Location 125,860,500 - 125,860,785
singlet/doubletsinglet
Overlap gene6330503K22Rik
Upstream geneLOC669758, Rps15a, Arl6ip1, 2610207I05Rik, LOC100043339, Syt17, LOC100042845, E030018N11Rik, Coq7, Tmc7, B230311B06Rik, Tmc5, Mir16
Downstream gene9030624J02Rik, 2310008H09Rik, Iqck, Gprc5b, Gpr139, LOC100042871, Gp2, Umod, 1700007B13Rik, C730027J19Rik, Acsm2, Acsm1, BC048390, Thumpd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114C02.bB6Ng01-114C02.g
ACCDH919733DH919734
length2411,059
definitionDH919733|Mus musculus domesticus DNA, BAC clone: B6Ng01-114C02, 5' end.DH919734|Mus musculus domesticus DNA, BAC clone: B6Ng01-114C02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cagtttcaacagcaatgtagaaagtgtaagctgaataaaccctttccttc
tcaacttgcttcgaagttatgatgtttgtgcaggaatagaaaacctgaag
aagacacagaggatgtcctagtcagtcatccgtgggagcagaggccctag
gtcttgggaaggttttatgccccagtataggggaatgccaggttctttaa
tgggagtggttggattgggggcaggagggaagggggactgg
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
gaattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagaactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgcccccaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgtggtaacacattcacaaa
ggaactcacacagtatgtactcactgataagtgaatattagtccaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aaaaatgaagagtgaagtgtggacactatacccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcaaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagccagctaatgcatggatcacagggctccca
tggaggagctagagaaagtacccaaggagctaaagggatctgcaccctat
agtggaccaacattatgactacagacccgagctcttgactctagctgcat
atgtatcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_125860500_125860785
seq2: B6Ng01-114C02.g_849_1125 (reverse)

seq1  TTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCA  50
      |||||||||||||||||||||||||||||||  |||| |||  ||| |||
seq2  TTGATACATATGCAGCTAGAGTCAAGAGCTC--GGGT-CTG--TAG-TCA  44

seq1  TAATGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTAC  100
      |||||||| |||| |||||||| |||||||||||||||||||||||||||
seq2  TAATGTTGGTCCA-CTATAGGG-TGCAGATCCCTTTAGCTCCTTGGGTAC  92

seq1  TTTCTCTAGCTCCTCCATTTGGAGACCTGTGATCCATCCAATAGCTGATT  150
      ||||||||||||||||| | |||| |||||||||||| || ||||||  |
seq2  TTTCTCTAGCTCCTCCA-TGGGAGCCCTGTGATCCATGCATTAGCTGGCT  141

seq1  GTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAG  191

seq1  ACAGCTACATCTGGGTCCTTTCGATAAAATCTTGCTAGTGTATGCAGTGG  250
      ||||||||||||||||||||| |||||||||||||||||||||||| |||
seq2  ACAGCTACATCTGGGTCCTTTTGATAAAATCTTGCTAGTGTATGCAATGG  241

seq1  TGTCAGCGTTTGGAAGCTGATTATGGGATGGATCCC  286
      |||||||||||||| |||||||||||| ||||||||
seq2  TGTCAGCGTTTGGATGCTGATTATGGGGTGGATCCC  277