BAC Information

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BAC

Clone NameB6Ng01-114G21
Chromosome7 (Build37)
Map Location 57,239,959 - 57,240,931
singlet/doubletsinglet
Overlap geneNell1
Upstream gene9130015G15Rik, 5330421F07Rik, Dbx1, Htatip2, Prmt3, Slc6a5
Downstream gene4933405O20Rik, EG668766, EG668767, EG668768, EG638046, EG668770, EG668774
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114G21.bB6Ng01-114G21.g
ACCDH919951DH919952
length1,206970
definitionDH919951|Mus musculus domesticus DNA, BAC clone: B6Ng01-114G21, 5' end.DH919952|Mus musculus domesticus DNA, BAC clone: B6Ng01-114G21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggttgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattctaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaataaactcaaacaag
tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatcttggcg
tgactctaactaaggaggtgaaagatctgtatgataaaaacttcaaatct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattggaaggagcaatttgcaaatttgtctggaataacaaaaaacc
taggatagcaaaaagtcttctcaaggataaaagaacttctggcggaatca
ccatgccagacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
tccagaaatgaacacacacacctatggtcacttgatcttcgacaagggag
ctaaaaccatccagtggaagaaagacagcattttcaacaattggtgctgg
cacaactgggttgttatcatgtagaagaatgcgaatcgatccatacttat
ctccttgtactaaggtcaaatctaagtggatcaggaacttcacataaaac
caagagacactgaaacttataagaggagaaggtggggaaagccttgaaga
ataggccacaggaaaattctgaacagaaacagccaatggcttgtgctgta
gatcggaaatcgacaaatgggaaccttattgaaaaatcttcaaggttctc
tggcca
gaattccacttaattacttagacatttggtgaactatttaagctggtgtg
gctaaaaggacaaaggctgggtcaccggattgctttcctttttgcctcgt
ggagagtgagaatcccagccattctctgctaagaaggcttgggtgctccg
tgagcttcctgggacaggggtcccacctgtctagagagttcttgatcttt
agagccagctgttgtgcctagtgtgtcagtgactaatgagccttttcagt
ctgatgaaaagtcctctgcccagtgtacctcggaagaggcttttgtttac
tttgcgggtcattcattccattgccgagcccatgggcggggcttcttctc
tggaacctgtttgctctctgggttggtgtttacctctaggagtcttccag
gtgggggtttttagcatccttggtgggaagagaaactaaattttgggaac
tgggtgagacattttcctgtaacctgggctcctgtgattggctatagcat
acctaccgggatagcccaggatgcccttttttctccagccaacgtcttat
tatatctgcaaagcttcctttatctcttaaggtggcatttttcataggtt
ctggtgattgactcctggactgctttggggaaaccattgttctgcgaatt
gcatcctctacttcccaaagattcatgtctgtcctacatgcaaaatacaa
ccatctcacccctatccttcaacaatcttaatgcttgaagcatcagcgca
ctgtcccaaatctccttcaattgtgtctgttgaagtcctaaaccttgctc
ttcatttaaatcatgtgtgatgagacacacttgggacagaattttcctca
tcgtgggcccatggaactggggggaaaaagatactacttccaaagataag
ggaggcagaaatggaatagacgcctcctgcttaaaggggaaggagtggga
agaaggggctgccacccacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_57239959_57240931
seq2: B6Ng01-114G21.g_64_1033

seq1  GAATTCCACTTAATTACTTAGACATTTGGTGAACTATTTAAGCTGGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTTAATTACTTAGACATTTGGTGAACTATTTAAGCTGGTGTG  50

seq1  GCTAAAAGGACAAAGGCTGGGTCACCGGATTGCTTTCCTTTTTGCCTCGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAAGGACAAAGGCTGGGTCACCGGATTGCTTTCCTTTTTGCCTCGT  100

seq1  GGAGAGTGAGAATCCCAGCCATTCTCTGCTAAGAAGGCTTGGGTGCTCCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGTGAGAATCCCAGCCATTCTCTGCTAAGAAGGCTTGGGTGCTCCG  150

seq1  TGAGCTTCCTGGGACAGGGGTCCCACCTGTCTAGAGAGTTCTTGATCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTCCTGGGACAGGGGTCCCACCTGTCTAGAGAGTTCTTGATCTTT  200

seq1  AGAGCCAGCTGTTGTGCCTAGTGTGTCAGTGACTAATGAGCCTTTTCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCAGCTGTTGTGCCTAGTGTGTCAGTGACTAATGAGCCTTTTCAGT  250

seq1  CTGATGAAAAGTCCTCTGCCCAGTGTACCTCGGAAGAGGCTTTTGTTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGAAAAGTCCTCTGCCCAGTGTACCTCGGAAGAGGCTTTTGTTTAC  300

seq1  TTTGCGGGTCATTCATTCCATTGCCGAGCCCATGGGCGGGGCTTCTTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCGGGTCATTCATTCCATTGCCGAGCCCATGGGCGGGGCTTCTTCTC  350

seq1  TGGAACCTGTTTGCTCTCTGGGTTGGTGTTTACCTCTAGGAGTCTTCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACCTGTTTGCTCTCTGGGTTGGTGTTTACCTCTAGGAGTCTTCCAG  400

seq1  GTGGGGGTTTTTAGCATCCTTGGTGGGAAGAGAAACTAAATTTTGGGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGGTTTTTAGCATCCTTGGTGGGAAGAGAAACTAAATTTTGGGAAC  450

seq1  TGGGTGAGACATTTTCCTGTAACCTGGGCTCCTGTGATTGGCTATAGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGAGACATTTTCCTGTAACCTGGGCTCCTGTGATTGGCTATAGCAT  500

seq1  ACCTACCGGGATAGCCCAGGATGCCCTTTTTTCTCCAGCCAACGTCTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACCGGGATAGCCCAGGATGCCCTTTTTTCTCCAGCCAACGTCTTAT  550

seq1  TATATCTGCAAAGCTTCCTTTATCTCTTAAGGTGGCATTTTTCATAGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTGCAAAGCTTCCTTTATCTCTTAAGGTGGCATTTTTCATAGGTT  600

seq1  CTGGTGATTGACTCCTGGACTGCTTTGGGGAAACCATTGTTCTGCGAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGATTGACTCCTGGACTGCTTTGGGGAAACCATTGTTCTGCGAATT  650

seq1  GCATCCTCTACTTCCCAAAGATTCATGTCTGTCCTACATGCAAAATACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCTCTACTTCCCAAAGATTCATGTCTGTCCTACATGCAAAATACAA  700

seq1  CCATCTCACCCCTATCCTTCAACAATCTTAATGCTTGAAGCATCAGCGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCACCCCTATCCTTCAACAATCTTAATGCTTGAAGCATCAGCGCA  750

seq1  CTGTCCCAAATCTCCTTCAATTGTGTCTGTTGAAGTCCTAAACCTTGCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCCAAATCTCCTTCAATTGTGTCTGTTGAAGTCCTAAACCTTGCTC  800

seq1  TTCATTTAAATCATGTGTGATGAGACACACTTGGGACAGAATTTTCCTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTAAATCATGTGTGATGAGACACACTTGGGACAGAATTTTCCTCA  850

seq1  TCGTGGGCCCATGGAACTGGGGGGAAAAAAGATACTACTTCCAAAAGATA  900
      |||||||||||||||||||||||| ||||||||||||||||| |||||||
seq2  TCGTGGGCCCATGGAACTGGGGGG-AAAAAGATACTACTTCC-AAAGATA  898

seq1  AGGGAGGCAGAAATGGAATAGACG-CTCCTGCTTAAAGGGGGAAGGAGTG  949
      |||||||||||||||||||||||| |||||||||||| ||||||||||||
seq2  AGGGAGGCAGAAATGGAATAGACGCCTCCTGCTTAAA-GGGGAAGGAGTG  947

seq1  GGAAGAAGGGGGCTGCCACCCACC  973
      ||||||| ||||||||||||||||
seq2  GGAAGAA-GGGGCTGCCACCCACC  970