BAC Information

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BAC

Clone NameB6Ng01-114J09
Chromosome7 (Build37)
Map Location 15,779,800 - 15,780,558
singlet/doubletsinglet
Overlap genenone
Upstream geneEG629219, EG434123, 2810007J24Rik, EG638251, B430211C08Rik, EG194588, LOC666352, EG666312, LOC666365, LOC671978, LOC100042677, LOC100042685, EG666381, LOC100042691, LOC100042702, LOC100042707, LOC100042711, LOC100042714, LOC100042717
Downstream geneLOC100042721, LOC100042728, LOC100042731, LOC100042735, LOC100042739, LOC100042742, LOC235841, EG666407, LOC666337, Obox2, LOC100042753, LOC100042756, LOC100042758, EG545921, LOC100042762, Obox1, LOC100042765, Obox3, LOC100042771, Obox5, EG638338, Obox6, Crx, Crxos1, Sepw1, Gltscr2, Ehd2, Gltscr1, Zfp541, Napa, Kptn, Slc8a2, Mrg2
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114J09.bB6Ng01-114J09.g
ACCDH920071DH920072
length7601,168
definitionDH920071|Mus musculus domesticus DNA, BAC clone: B6Ng01-114J09, 5' end.DH920072|Mus musculus domesticus DNA, BAC clone: B6Ng01-114J09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaggcactggtctgagggctgtgttgtatagaaagcctgagtca
ttagatggagaggcttgacaagaggagatttaaactgtggggtttctctg
atttatttccctttaaatgggcatgcaggagtaggatgaacgcacaataa
gatctccagtggacttgggacgaaagtgagctctgggggggggggggcca
aaatagaccatggtggtggtatattgactggaaagtgtgacaacttgtca
gctttatgactaaacaggtcctcattcaacaagaagaggtaaccatattg
ggtttgtggagcacacattttacccccgttctccagacccattggcagtg
ggactctgtaatattgagggctggcttattattatagtgggatccagaaa
gtgagggacatgtagaattgccagtctcaattttgaaaaagaaaaaagga
aaaaagggagagagagagagagagagagagagagagagaggaattgaaaa
gaaaggaaaggaaagggaagggaaggaaaagaaaaggaaaggaaaggaga
ggagaggaaaggaaagaaaataaagagaagaaaagaaaagagagggtaat
tacaaggtgaaaacaggggacaggaatgagcaggtccccttgggctctag
catgagggagagatgttttttgaggtgatcccagaaaattgtagaacaaa
tttcttctggattgaaaccaagagggcaggactccccaaagaatgattcc
aatatggtgt
gaattctttatatattttggatattggccctctaacagatgtagggttag
tgaagatgtcctattggcagtgtcctttaccttacagaagcttttaaatt
tcgtaagattccacgtgtcatttttgatattagagtctgagccattggtg
ttcttttcaggaaattttcccctgtgttactgagttcaaggctattttcc
attttctattctattggattcagtgtatctggttttatgttgaagtccct
aatccatttggacttgtggtttgtataagatgataaataaggtaagatgt
acaaatatggatcagtttgcattcaggtacaggcagaactccaattaggc
aagcaccacatattcaagatgcttcctattttcccactgtatgtcttcgg
gttctttgtcaaagatcaagtatgtacagcagtgtaggtatatttcaaga
ccttcaatatgtgatttatcaacaggtctgtgtctatgccaataccatga
ggttttatcactactgatctgtagtacagtgatgtcggggatgatgattt
ccccagaagttcttttatagttgagataatgtttgggtaccttaagtttt
ttgatttgccatattgaggtgaaaattgttcttttcatgtttgttaagaa
ttttgctggaattttgatatggattactttgaatctgtaaattgctgttg
gttgtgttcaccacgttaatcctccctatccatgagcccagtagatcttt
ccatcttctgagaatgtcttcagtttctttcttcagggacatgtagttct
tgtcatatagatctttcacttgcatggttagagttacatcaagatatttt
atattacttgtggctattctggagggatgtagattccctaagttctttct
cagcacatttattatttgtataaagggaacactactgatttgtttgagtt
attttataatgatccacttttctggaattatttttcatctgtagtgttct
ttgtagactttacggctgattgcatctatatatcacatcatctgcaatat
gacattttgctatcctttccaatagtgtctctttacacttaatgtttcct
actctctagcagaactggggaagcatatcgtatgatacaatgtcgatacc
ttgatgtgcgcattttag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_15779800_15780558
seq2: B6Ng01-114J09.b_51_810

seq1  GAATTCTAGGCACTGGTCTGAGGGCTGTGTTGTATAGAAAGCCTGAGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGCACTGGTCTGAGGGCTGTGTTGTATAGAAAGCCTGAGTCA  50

seq1  TTAGATGGAGAGGCTTGACAAGAGGAGATTTAAACTGTGGGGTTTCTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATGGAGAGGCTTGACAAGAGGAGATTTAAACTGTGGGGTTTCTCTG  100

seq1  ATTTATTTCCCTTTAAATGGGCATGCAGGAGTAGGATGAACGCACAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTCCCTTTAAATGGGCATGCAGGAGTAGGATGAACGCACAATAA  150

seq1  GATCTCCAGTGGACTTGGGACGAAAGTGAGCTCTGGGGGGGGGGGGGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCCAGTGGACTTGGGACGAAAGTGAGCTCTGGGGGGGGGGGGGCCA  200

seq1  AAATAGACCATGGTGGTGGTATATTGACTGGAAAGTGTGACAACTTGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGACCATGGTGGTGGTATATTGACTGGAAAGTGTGACAACTTGTCA  250

seq1  GCTTTATGACTAAACAGGTCCTCATTCAACAAGAAGAGGTAACCATATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATGACTAAACAGGTCCTCATTCAACAAGAAGAGGTAACCATATTG  300

seq1  GGTTTGTGGAGCACACATTTTACCCCCGTTCTCCAGACCCATTGGCAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGTGGAGCACACATTTTACCCCCGTTCTCCAGACCCATTGGCAGTG  350

seq1  GGACTCTGTAATATTGAGGGCTGGCTTATTATTATAGTGGGATCCAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCTGTAATATTGAGGGCTGGCTTATTATTATAGTGGGATCCAGAAA  400

seq1  GTGAGGGACATGTAGAATTGCCAGTCTCAATTTTGAAAAAGAAAAAAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGGACATGTAGAATTGCCAGTCTCAATTTTGAAAAAGAAAAAAGGA  450

seq1  AAAAAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAATTGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAATTGAAAA  500

seq1  GAAAGGAAAGGAAAGGGAAGGGAAGGAAAAGAAAAGGAAAGGAAAGGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGAAAGGAAAGGGAAGGGAAGGAAAAGAAAAGGAAAGGAAAGGAGA  550

seq1  GGAGAGGAAAGGAAAGAAAATAAAGAGAAGAAAAGAAAAGAGAGGGTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGAAAGGAAAGAAAATAAAGAGAAGAAAAGAAAAGAGAGGGTAAT  600

seq1  TACAAGGTGAAAACAGGGGACAGGAATGAGCAGGTCCCCTTGGGCTCTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGGTGAAAACAGGGGACAGGAATGAGCAGGTCCCCTTGGGCTCTAG  650

seq1  CATGA-GGAGAGATGTTTTTTGAGGTGATCCCAGAAGATTGTAGAACAAA  699
      ||||| |||||||||||||||||||||||||||||| |||||||||||||
seq2  CATGAGGGAGAGATGTTTTTTGAGGTGATCCCAGAAAATTGTAGAACAAA  700

seq1  TTTCTTCTGGA-TGAAACCAAAGAGGGCAGGACTCCCCAAAGAATGAGTC  748
      ||||||||||| ||||||| ||||||||||||||||||||||||||| ||
seq2  TTTCTTCTGGATTGAAACC-AAGAGGGCAGGACTCCCCAAAGAATGATTC  749

seq1  CAATATGGTGT  759
      |||||||||||
seq2  CAATATGGTGT  760