BAC Information

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BAC

Clone NameB6Ng01-114N11
Chromosome7 (Build37)
Map Location 146,550,053 - 146,733,920
singlet/doubletdoublet
Overlap geneInpp5a
Upstream geneTcerg1l, LOC100043290, Mapk1ip1, Ppp2r2d, Bnip3, EG668784, LOC669185, 6330417G02Rik, Dpysl4, Stk32c, LOC100038956, Lrrc27, Pwwp2
Downstream geneNkx6-2, E030019B06Rik, 9330101J02Rik, LOC100043472, EG434253, EG664869, Gpr123, LOC244229, Kndc1, Utf1, LOC100039095, 6430531B16Rik, Adam8, Tubgcp2, Zfp511, Msx3, Drd1ip, Prap1, 1810014F10Rik, Echs1, Paox, Mtg1, Sprn, Olfr522, Olfr523, Olfr524, E430002D04Rik, 5830411N06Rik, EG622335, Olfr525, Olfr527, GA_x5J8B7W72BC-152913-152037, Olfr60, GA_x5J8B7W72BC-125691-125311, Olfr530, LOC622973, Olfr531, Olfr532, Olfr533, Olfr534-ps1, Olfr535, Olfr536, Olfr537-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114N11.bB6Ng01-114N11.g
ACCDH920260DH920261
length1,158387
definitionDH920260|Mus musculus domesticus DNA, BAC clone: B6Ng01-114N11, 5' end.DH920261|Mus musculus domesticus DNA, BAC clone: B6Ng01-114N11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(146,732,771 - 146,733,920)(146,550,053 - 146,550,445)
sequence
gaattcaccctgccaacccttcttatcttggacacacacacatacacaca
cacacacacacacacacacacacacacacacaccttctcgatgttagccc
tgctacatccccatctcccttgaagttgaggtaggagtcagtgggtgtct
tgtcccatagggaagctgttctgtggccagatccgcaaccagcactgcag
tcactgctgtagttgtggcagctcaggctcccaaggccacatctatagcc
tctcaggtgcctagggaagcccagcacataaagcacccacacctgagtgt
cccatagctctcaatagcccaagtgtgcgtcactgagtggggaggcaaag
cacagggagtggactggtggctataggactgtgggcagctgctcagtcca
ccctcagtgaggccagcagttcagactgactcagcaaaaccagggacagg
attttataagattgcctaagctttttagattgggttctacctgacacagg
aggcctactgtaggtcacagggctgggcaaaaggcccactgtgcaaagtt
caccttacagaatcagcaacggatgctgtttggggagctgtctatcagta
cccacagaggcctgtccagtctccttctccttgctggacagtggcagcta
ctcatctaaaacagagcatcacaaacagcctgtcatctcttctcccaaaa
cggcttgccttgcagcagctggtgcttgtgtccaggttattagtggcact
gagtgacttgttcatcccacctaggtaggacaggacctacttttataaga
gtataggcacaagctgagactcacacaatttgtgtgagcacccacagccc
agaagtatcttcacaagattgtgtaagccctctgtggcttacactctgtc
ttggctggggctagacctgcagcaagactcctttcagatgccccaagctc
acacagctggaaaagcagagaaagcagagcacagagttctcacaggtctt
cggaggctgcagcaggtcatgagtacgcagccaacagcctcttgattcag
tggagtcaaaaactatgctacctctaatagaatctttggagatagtaaaa
cgagagaatcactggctattaaaagtattcaaatggactcttgtagaagg
aaatactc
tgacatcagattttccatgctcgcctgtgggggaggagccggctttgagc
cagaagtgcaggagtggtgggtgggggaggggcagagcagctgaggctgt
ctcggagctctgtaggcccaaggtccaaggaagggaaggctctatggcct
gcccaccacctccagggtccgcgctgcccggctctcttccctggagcatc
cttggcaacagcaactttctcatcccagccggaccttgctgagtcacaag
ggggctgggttagagaacgctaaaaatagctagcggctagctgggccagc
actggaagttataattaggagtggatagagccatcctcctgggctggtct
cactgttcagagctgctggagaatggggggtggggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_146732771_146733920
seq2: B6Ng01-114N11.b_49_1206 (reverse)

seq1  GAGTATTTACTTCTACAAAGATCAATTTGAATACTTTAATTAGCCAGTGA  50
      |||||||| |||||||||   || ||||||||||||| | ||||||||||
seq2  GAGTATTTCCTTCTACAAGAGTCCATTTGAATACTTTTAATAGCCAGTGA  50

seq1  TTCTACTGTTTTACTATCTC--AAGATTCTATTAGA-GTAGCTAGGTCTT  97
      ||||   |||||||||||||  |||||||||||||| |||||   || ||
seq2  TTCTCTCGTTTTACTATCTCCAAAGATTCTATTAGAGGTAGCATAGTTTT  100

seq1  TGACT-CACTG-ATCAAGAAGCTGTTTGGCTGCGTACTCATGACCTGCTG  145
      ||||| ||||| ||||||| |||| |||||||||||||||||||||||||
seq2  TGACTCCACTGAATCAAGAGGCTG-TTGGCTGCGTACTCATGACCTGCTG  149

seq1  CAG-CTCCGAAGACCTGTGGGAACTCTGTGCTCTGCTTTCTCTGC-TTTC  193
      ||| ||||||||||||||| ||||||||||||||||||||||||| ||||
seq2  CAGCCTCCGAAGACCTGTGAGAACTCTGTGCTCTGCTTTCTCTGCTTTTC  199

seq1  CAGCTGTGTGAGCTTGGGGCATCTGGAAGGAGTCCTGCTGCAGGTCTAGC  243
      ||||||||||||||||||||||||| |||||||| |||||||||||||||
seq2  CAGCTGTGTGAGCTTGGGGCATCTGAAAGGAGTCTTGCTGCAGGTCTAGC  249

seq1  CCCAGCCAAGACAGAGTGTAAGCCACAG-GGGCTTACACAATCTTGTG-A  291
      |||||||||||||||||||||||||||| ||||||||||||||||||| |
seq2  CCCAGCCAAGACAGAGTGTAAGCCACAGAGGGCTTACACAATCTTGTGAA  299

seq1  GATACTTCTGGGCTGTGGGTGCTCACACAAATTGTGTGAGTCTCAGCTTG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTTCTGGGCTGTGGGTGCTCACACAAATTGTGTGAGTCTCAGCTTG  349

seq1  TGCCTATACTCTTATAAAAGTAGGTCCTGTCCTACCTAGGTGGGATGAAC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTATACTCTTATAAAAGTAGGTCCTGTCCTACCTAGGTGGGATGAAC  399

seq1  AAGTCACTCAGTGCCACTAATAACCTGGACACAAGCACCAGCTGCTGCAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACTCAGTGCCACTAATAACCTGGACACAAGCACCAGCTGCTGCAA  449

seq1  GGCAAGCCGTTTTGGGAGAAGAGATGACAGGCTGTTTGTGATGCTCTGTT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGCCGTTTTGGGAGAAGAGATGACAGGCTGTTTGTGATGCTCTGTT  499

seq1  TTAGATGAGTAGCTGCCACTGTCCAGCAAGGAGAAGGAGACTGGACAGGC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATGAGTAGCTGCCACTGTCCAGCAAGGAGAAGGAGACTGGACAGGC  549

seq1  CTCTGTGGGTACTGATAGACAGCTCCCCAAACAGCATCCGTTGCTGATTC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGGGTACTGATAGACAGCTCCCCAAACAGCATCCGTTGCTGATTC  599

seq1  TGTAAGGTGAACTTTGCACAGTGGGCCTTTTGCCCAGCCCTGTGACCTAC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGGTGAACTTTGCACAGTGGGCCTTTTGCCCAGCCCTGTGACCTAC  649

seq1  AGTAGGCCTCCTGTGTCAGGTAGAACCCAATCTAAAAAGCTTAGGCAATC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGCCTCCTGTGTCAGGTAGAACCCAATCTAAAAAGCTTAGGCAATC  699

seq1  TTATAAAATCCTGTCCCTGGTTTTGCTGAGTCAGTCTGAACTGCTGGCCT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAATCCTGTCCCTGGTTTTGCTGAGTCAGTCTGAACTGCTGGCCT  749

seq1  CACTGAGGGTGGACTGAGCAGCTGCCCACAGTCCTATAGCCACCAGTCCA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGGGTGGACTGAGCAGCTGCCCACAGTCCTATAGCCACCAGTCCA  799

seq1  CTCCCTGTGCTTTGCCTCCCCACTCAGTGACGCACACTTGGGCTATTGAG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGTGCTTTGCCTCCCCACTCAGTGACGCACACTTGGGCTATTGAG  849

seq1  AGCTATGGGACACTCAGGTGTGGGTGCTTTATGTGCTGGGCTTCCCTAGG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATGGGACACTCAGGTGTGGGTGCTTTATGTGCTGGGCTTCCCTAGG  899

seq1  CACCTGAGAGGCTATAGATGTGGCCTTGGGAGCCTGAGCTGCCACAACTA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGAGAGGCTATAGATGTGGCCTTGGGAGCCTGAGCTGCCACAACTA  949

seq1  CAGCAGTGACTGCAGTGCTGGTTGCGGATCTGGCCACAGAACAGCTTCCC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTGACTGCAGTGCTGGTTGCGGATCTGGCCACAGAACAGCTTCCC  999

seq1  TATGGGACAAGACACCCACTGACTCCTACCTCAACTTCAAGGGAGATGGG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGACAAGACACCCACTGACTCCTACCTCAACTTCAAGGGAGATGGG  1049

seq1  GATGTAGCAGGGCTAACATCGAGAAGGTGTGTGTGTGTGTGTGTGTGTGT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAGCAGGGCTAACATCGAGAAGGTGTGTGTGTGTGTGTGTGTGTGT  1099

seq1  GTGTGTGTGTGTGTGTATGTGTGTGTGTCCAAGATAAGAAGGGTTGGCAG  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTATGTGTGTGTGTCCAAGATAAGAAGGGTTGGCAG  1149

seq1  GGTGAATTC  1150
      |||||||||
seq2  GGTGAATTC  1158

seq1: chr7_146550053_146550445
seq2: B6Ng01-114N11.g_71_463

seq1  GAATTCTGACATCAGATTTTCCATGCTCGCCTGTGGGGGAGGAGCCGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGACATCAGATTTTCCATGCTCGCCTGTGGGGGAGGAGCCGGCT  50

seq1  TTGAGCCAGAAGTGCAGGAGTGGTGGGTGGGGGAGGGGCAGAGCAGCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCCAGAAGTGCAGGAGTGGTGGGTGGGGGAGGGGCAGAGCAGCTGA  100

seq1  GGCTGTCTCGGAGCTCTGTAGGCCCAAGGTCCAAGGAAGGGAAGGCTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTCTCGGAGCTCTGTAGGCCCAAGGTCCAAGGAAGGGAAGGCTCTA  150

seq1  TGGCCTGCCCACCACCTCCAGGGTCCGCGCTGCCCGGCTCTCTTCCCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTGCCCACCACCTCCAGGGTCCGCGCTGCCCGGCTCTCTTCCCTGG  200

seq1  AGCATCCTTGGCAACAGCAACTTTCTCATCCCAGCCGGACCTTGCTGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCCTTGGCAACAGCAACTTTCTCATCCCAGCCGGACCTTGCTGAGT  250

seq1  CACAAGGGGGCTGGGTTAGAGAACGCTAAAAATAGCTAGCGGCTAGCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGGGGGCTGGGTTAGAGAACGCTAAAAATAGCTAGCGGCTAGCTGG  300

seq1  GCCAGCACTGGAAGTTATAATTAGGAGTGGATAGAGCCATCCTCCTGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCACTGGAAGTTATAATTAGGAGTGGATAGAGCCATCCTCCTGGGC  350

seq1  TGGTCTCACTGTTCAGAGCTGCTGGAGAATGGGGGGTGGGGGG  393
      ||||||||||||||||||||||||||||||||||||||||| |
seq2  TGGTCTCACTGTTCAGAGCTGCTGGAGAATGGGGGGTGGGGTG  393