BAC Information

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BAC

Clone NameB6Ng01-114N23
Chromosome7 (Build37)
Map Location 30,700,174 - 30,863,046
singlet/doubletdoublet
Overlap geneZfp74, LOC625437, LOC100043796, Zfp568, Zfp14, LOC100043798, Zfp82, Zfp566
Upstream geneActn4, Eif3s12, Map4k1, Ryr1, Rasgrp4, 1110006G06Rik, Spred3, Ggn, Psmd8, A230107C01Rik, Kcnk6, Yif1b, Spint2, Ppp1r14a, Neud4, Sipa1l3, LOC100043791, 4932431P20Rik, 4930432E11Rik, 1700067C01Rik, Zfp84, LOC100043794, Zfp30, EG625349, 6330581L23Rik, BC027344, Zfp420, Zfp27
Downstream geneZfp260, Zfp382, Zfp146, EG330503, Cox7a1, Capns1, Tbcb, Polr2i, Ovol3, Wdr62, EG668354, 1700020L13Rik, Clip3, Alkbh6, AI428936, 0610010E21Rik, Lrfn3, Tyrobp, Hcst, AY078069, Aplp1, Kirrel2, Nphs1, LOC100034728, Prodh2, Gm1082, Snx26, BC053749, Hspb6, 1810054G18Rik, Psenen, U2af1l4, Tmem149, Wbp7, Zbtb32, Upk1a, Cox6b1, Etv2, 3100004P22Rik, 2310022K01Rik, 4930479M11Rik, 2200002J24Rik, EG233075, Atp4a, Tmem147, Gapdhs, Sbsn, Dmkn, Krtdap, Ffar2, Ffar3, Ffar1, Cd22, Mag, Hamp2, Usf2-ps1, Hamp1, Usf2, LOC100043823, Lsr, Tmem162, Fxyd5, Fxyd7, Fxyd1, Lgi4, Fxyd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114N23.bB6Ng01-114N23.g
ACCDH920284DH920285
length9031,019
definitionDH920284|Mus musculus domesticus DNA, BAC clone: B6Ng01-114N23, 5' end.DH920285|Mus musculus domesticus DNA, BAC clone: B6Ng01-114N23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,700,174 - 30,700,854)(30,862,037 - 30,863,046)
sequence
gaattcatattggtgagaagtcttatgaatgtaaggagtgtgggaagttc
ttcagttgtgggtcacatgttactcgccatctgaaaattcacactggtga
aaagccctttgaatgcaaagactgtgggaaggcctttagttgtagctcat
acctttctcagcatcagagaatccacactggtaaaaaaccttacgaatgt
aaggaatgcgggaaagcctttagctactgctcaaatctcattgaccatca
gcgaattcacactggtgagaagccttatgcctgcaaagtatgtgggaaag
cttttacaaagagctcacaacttttccaacacgtgcgagttcatacaggt
gagaaaccttatgaatgcaaggaatgcggcaaagcctttacgcagagctc
gaagcttgttcagcatcagagaatccacactggagagaaaccctatgagt
gcaaggaatgtgggaaggcctttagtagtggctcagcccttacaaaccat
cagagaatccacactggggagaaaccctatgagtgcaaggagtgtgggaa
ggccttcactcagagctcacagcttaggcaacatcaaagaatccatgctg
gcgagaaaccttttgaatgcctggaatgtggaaaggccttcacccagaac
tcacagctttttcagcatcagagagtccactcagatgaaaaaccttatga
atgtaataaaatgtgggaaggcctttaataagtgctcaaacccttactcg
gcatctgagaactcatcgcgatgacaagccccatagctgtaccgaatgtg
ggaagacgttttagtaatgattcagacctcattgccatcaggaaactcat
actaacgagtaataaaacttcatgcttgacagttactctctggcattgtt
tga
gaattcacactggcgagaagccttatgaatgtaaagaatgtgggaaggct
tttagtagcggttcaaatttcactcaacaccagagaattcacaccggaga
gaaaccctacgaatgtaaggaatgcggcaatgcctttagtcagagttccc
aacttattaaacatcaaagaatccacaccggtgagaagccctatgagtgt
aaggagtgtgagaaggctttccggtcgggttctgacctcaccagacacca
gagaatccacaccggagagaagccgtatgaatgtaagatttgtgggaaag
cctattctcagagttcacaactcatcagtcatcacagaattcatggtggt
aagaaagcctacgaagatgaggacggtgggaagaactttatctataactc
acagcctattcagcatcagaacttatattggtgatgaaccgacacataca
tgatgtatgggaagactcagaactgtcagagactctgtagaggccctcta
gaccggagaatgtcgaaacagttgacttgttgacaaacttgttcatctaa
gagaaactcatattggagaagcaccctatgaatgcagtatattctggaag
ctgtctagtaacagcttgtatttcttttgactcagattattcagtctggc
aaataattgaacagaaaacaatgctttgatcttaaacgtaacaatctgtg
tggcagtgtaattttatggttttcgttctttcctttttttctcataattg
cgtcattaacttttttttttttcctttttggaggggggtatctttggaga
caggggtttctctgtgtagcgctgggctgttctgaagttctctgtagact
aggcctgggctacaaactcagagatctgcctaccttccgcctcctgaacg
cttgggattagaggtgtgcgccgttaattgcctgctgtatttcttgatgg
gttttacggggcttgatccttgaggccttatgagcaaatccaggacaact
ttgagcatggggactaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_30700174_30700854
seq2: B6Ng01-114N23.b_268_950

seq1  TAGCTACTGCTCAAATCTCATTGACCATCAGCGAATTCACACTGGTGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTACTGCTCAAATCTCATTGACCATCAGCGAATTCACACTGGTGAGA  50

seq1  AGCCTTATGCCTGCAAAGTATGTGGGAAAGCTTTTACAAAGAGCTCACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTATGCCTGCAAAGTATGTGGGAAAGCTTTTACAAAGAGCTCACAA  100

seq1  CTTTTCCAACACGTGCGAGTTCATACAGGTGAGAAACCTTATGAATGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCAACACGTGCGAGTTCATACAGGTGAGAAACCTTATGAATGCAA  150

seq1  GGAATGCGGCAAAGCCTTTACGCAGAGCTCGAAGCTTGTTCAGCATCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGCGGCAAAGCCTTTACGCAGAGCTCGAAGCTTGTTCAGCATCAGA  200

seq1  GAATCCACACTGGAGAGAAACCCTATGAGTGCAAGGAATGTGGGAAGGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCACACTGGAGAGAAACCCTATGAGTGCAAGGAATGTGGGAAGGCC  250

seq1  TTTAGTAGTGGCTCAGCCCTTACAAACCATCAGAGAATCCACACTGGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTAGTGGCTCAGCCCTTACAAACCATCAGAGAATCCACACTGGGGA  300

seq1  GAAACCCTATGAGTGCAAGGAGTGTGGGAAGGCCTTCACTCAGAGCTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCTATGAGTGCAAGGAGTGTGGGAAGGCCTTCACTCAGAGCTCAC  350

seq1  AGCTTAGGCAACATCAAAGAATCCATGCTGGCGAGAAACCTTTTGAATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAGGCAACATCAAAGAATCCATGCTGGCGAGAAACCTTTTGAATGC  400

seq1  CTGGAATGTGGAAAGGCCTTCACCCAGAACTCACAGCTTTTTCAGCATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATGTGGAAAGGCCTTCACCCAGAACTCACAGCTTTTTCAGCATCA  450

seq1  GAGAGTCCACTCAGATGAAAAACCTTATGAATGTAAT-AAATGTGGGAAG  499
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GAGAGTCCACTCAGATGAAAAACCTTATGAATGTAATAAAATGTGGGAAG  500

seq1  GCCTTTAATAAGTGCTCAAA-CCTTACTCGGCATCTGAGAACTCATCGCG  548
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GCCTTTAATAAGTGCTCAAACCCTTACTCGGCATCTGAGAACTCATCGCG  550

seq1  ATGACAAGCCCCATAGCTGTACCGAATGTGGGAAGACG-TTTAGTAATGA  597
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATGACAAGCCCCATAGCTGTACCGAATGTGGGAAGACGTTTTAGTAATGA  600

seq1  TTCAGACCTCATTAGCCATCAGGAAACTCATACTAACGAGTAATAAAACT  647
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTCAGACCTCATT-GCCATCAGGAAACTCATACTAACGAGTAATAAAACT  649

seq1  TCATGCTTGACAGTTACTCTCTGGCATTGTTTGA  681
      ||||||||||||||||||||||||||||||||||
seq2  TCATGCTTGACAGTTACTCTCTGGCATTGTTTGA  683

seq1: chr7_30862037_30863046
seq2: B6Ng01-114N23.g_67_1085 (reverse)

seq1  TCTTAGTCACCATGCTCAAAGTTGTTCATGAATATGCTCATAAAGACTCA  50
      |||||||| ||||||||||||||| || || || ||||||||| | ||||
seq2  TCTTAGTCCCCATGCTCAAAGTTG-TCCTGGATTTGCTCATAAGGCCTCA  49

seq1  AAGAACAAGCCACCGTAAAA-CCATTAAG-AATACAGCAGGCAA-TAACG  97
      | || |||||| |||||||| |||| ||| |||||||||||||| |||||
seq2  AGGATCAAGCC-CCGTAAAACCCATCAAGAAATACAGCAGGCAATTAACG  98

seq1  GCGCACACCTTTAATCCC-AGCGTTCAGGAGGCGG-AGGTAGGCAGATCT  145
      |||||||||| ||||||| |||||||||||||||| ||||||||||||||
seq2  GCGCACACCTCTAATCCCAAGCGTTCAGGAGGCGGAAGGTAGGCAGATCT  148

seq1  CTGAGTTTGTAGCC--AGCCTAGTCTACAGAGAACTTCAGGACAG-CCAG  192
      ||||||||||||||   ||||||||||||||||||||||| |||| ||||
seq2  CTGAGTTTGTAGCCCAGGCCTAGTCTACAGAGAACTTCAGAACAGCCCAG  198

seq1  CGCTACACAGAGAAA-CCCTGTCTCC-AAGATACCCCCCTCCAAAAAGG-  239
      ||||||||||||||| |||||||||| |||||||||||||||||||||| 
seq2  CGCTACACAGAGAAACCCCTGTCTCCAAAGATACCCCCCTCCAAAAAGGA  248

seq1  AAAAAAAAAAAGTTAATGACGCAATTATGAGAAAAAAAGGAAAGAACGAA  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAGTTAATGACGCAATTATGAGAAAAAAAGGAAAGAACGAA  298

seq1  AACCATAAAATTACACTGCCACACAGATTGTTACGTTTAAGATCAAAGCA  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATAAAATTACACTGCCACACAGATTGTTACGTTTAAGATCAAAGCA  348

seq1  TTGTTTTCTGTTCAATTATTTGCCAGACTGAATAATCTGAGTCAAAAGAA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTCTGTTCAATTATTTGCCAGACTGAATAATCTGAGTCAAAAGAA  398

seq1  ATACAAGCTGTTACTAGACAGCTTCCAGAATATACTGCATTCATAGGGTG  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAGCTGTTACTAGACAGCTTCCAGAATATACTGCATTCATAGGGTG  448

seq1  CTTCTCCAATATGAGTTTCTCTTAGATGAACAAGTTTGTCAACAAGTCAA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCAATATGAGTTTCTCTTAGATGAACAAGTTTGTCAACAAGTCAA  498

seq1  CTGTTTCGACATTCTCCGGTCTAGAGGGCCTCTACAGAGTCTCTGACAGT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCGACATTCTCCGGTCTAGAGGGCCTCTACAGAGTCTCTGACAGT  548

seq1  TCTGAGTCTTCCCATACATCATGTATGTGTCGGTTCATCACCAATATAAG  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTCTTCCCATACATCATGTATGTGTCGGTTCATCACCAATATAAG  598

seq1  TTCTGATGCTGAATAGGCTGTGAGTTATAGATAAAGTTCTTCCCACCGTC  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATGCTGAATAGGCTGTGAGTTATAGATAAAGTTCTTCCCACCGTC  648

seq1  CTCATCTTCGTAGGCTTTCTTACCACCATGAATTCTGTGATGACTGATGA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTTCGTAGGCTTTCTTACCACCATGAATTCTGTGATGACTGATGA  698

seq1  GTTGTGAACTCTGAGAATAGGCTTTCCCACAAATCTTACATTCATACGGC  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGAACTCTGAGAATAGGCTTTCCCACAAATCTTACATTCATACGGC  748

seq1  TTCTCTCCGGTGTGGATTCTCTGGTGTCTGGTGAGGTCAGAACCCGACCG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCCGGTGTGGATTCTCTGGTGTCTGGTGAGGTCAGAACCCGACCG  798

seq1  GAAAGCCTTCTCACACTCCTTACACTCATAGGGCTTCTCACCGGTGTGGA  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCCTTCTCACACTCCTTACACTCATAGGGCTTCTCACCGGTGTGGA  848

seq1  TTCTTTGATGTTTAATAAGTTGGGAACTCTGACTAAAGGCATTGCCGCAT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGATGTTTAATAAGTTGGGAACTCTGACTAAAGGCATTGCCGCAT  898

seq1  TCCTTACATTCGTAGGGTTTCTCTCCGGTGTGAATTCTCTGGTGTTGAGT  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTACATTCGTAGGGTTTCTCTCCGGTGTGAATTCTCTGGTGTTGAGT  948

seq1  GAAATTTGAACCGCTACTAAAAGCCTTCCCACATTCTTTACATTCATAAG  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTGAACCGCTACTAAAAGCCTTCCCACATTCTTTACATTCATAAG  998

seq1  GCTTCTCGCCAGTGTGAATTC  1010
      |||||||||||||||||||||
seq2  GCTTCTCGCCAGTGTGAATTC  1019