BAC Information

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BAC

Clone NameB6Ng01-115D23
Chromosome7 (Build37)
Map Location 102,373,694 - 102,482,900
singlet/doubletdoublet
Overlap genenone
Upstream geneEG666816, LOC100040132
Downstream geneLOC666823, Frda-ps, EG666836, Odz4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115D23.bB6Ng01-115D23.g
ACCDH920562DH920563
length1,1541,125
definitionDH920562|Mus musculus domesticus DNA, BAC clone: B6Ng01-115D23, 5' end.DH920563|Mus musculus domesticus DNA, BAC clone: B6Ng01-115D23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,481,747 - 102,482,900)(102,373,694 - 102,374,827)
sequence
gaattcttaaccactgagtaacttttccaacctcttagaacagattttta
taaccattagttatactgtatttcttataggttgcttgcctctcatgttt
cttcagaaccaacgcttacgcacacacatgtgcacgcacacacacacaca
cacacacacatgtgcaaatgcacacacatggacacacttacaaggaaatg
aacttttaagagtagtcattgttcagagctgtggcaggataggtatctgg
ccttcttcgagagaactaatttgaattattgagactcaataaagtctttg
gtaacaaatactgaactgtcatgacataacataatgaaagtgatttggca
gtgcaaggaaatcaccaaactaaatatcaaaaagagaaaaatcacgtcaa
tttctgtttcctgctgtgtggccactctgtagactcctttactttgtgtc
tgtactagctagttttgtgtcaacttgacacagctggagttatcacagag
aaaggagcttcagttgaggaaatgcctccatgagatccaactgtaaggca
ttttctcaattagtgatcaagggggaaaggccccttgtgggtgggaccat
ctctgggctggtagtcttgggtgttataagagagcaggctgagcaagcca
ggtgaagcaagccagtaaagaacatccctccatggcctctgcatcagctc
ctgctttctgacctgcttgagttccagtcctgcatcctttggtgatcaac
agcagtatggaaatgtaagctgaataaaccctttcctccccatcttgctt
tcttggtcatgatgtttgtgcaggaatagaaaccctgactaagacagtgt
ctaatccttttttttttttttgttcaaatagattttcttccattttcttc
gctaattttggacaaagacctttagttcctataaataatactttctttct
atcacaaaatgaaaggaaaaataagaaagaaaagaaagagaccatgggtg
ggcagcagaactacaggagtgatgactttttttctagctgcatcctgtgc
ttagaatcttctttatgactgaagatggagatacatgatttactagagga
caaaggaagagccttgaatttaaggaaagaaaccatgggatgtagcccct
taga
gaattcaactttgccatccagtcacccaaccaacaaaattaggtatgaat
taccattattctttgttagaaaacagaaaccattgatgtttatgtaaatg
gcgatccaaggaggcaaatcaggaacttgcatattgcatttcagtgttga
gtaaaccacttaccctcttagcacaagcttaggaagctgacctttgctcc
acttagttgctattgcattagcacagcctcttctaaacaatagtgtcaaa
caatctaaaacacttcttaccaacccaacacacatgcagaaaaggcaaag
aaaatctattgaaagaaaggacaagactcttctaaaattaaagaaatgtt
tactcagaataccaggccagctaaacttatgaagaactactctgtacata
gctcaaggacacacaaacttgcctgttgtttcatctttaaactcaacact
tacattacttctggctctgagataaattcttttctagaaggaaaaactta
gggcctcctactttttaatctaactttgctttttataaaagaaactgcag
taaaatgccttggttatgacagaagagtaaaaagcaaactcgcaaataat
ttaggacagtcttcatatagtgtccatcactacaaaccacagtgttaggt
ggcagggaggtggaaaagcagaataattcttcaaaaattagctacttggc
tctctgaaacccaggtggctacttggcatgaggaagccatccagttctag
aatgaagccttgagatagtttcacacctgtcttcatttttctccatggtt
ttgcttaacagttgtaattcccttaattttataagttaataattttttaa
tttaatataatatatattattacatttaatatatattttcatgcaattta
atagtgtatattaatgatatatgtaatttcatactatttatttatgtaaa
tatgtatgtgtgtgtaaatatatatataaaaaactttggctacactgatc
tctctctcacgcccattagtgtcatctccccattcacaaaatactcaatc
actagaatcatttttattttgcttcttttatgtgcttgtatgctacactg
gagtttactagacctagtaggcatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_102481747_102482900
seq2: B6Ng01-115D23.b_45_1198 (reverse)

seq1  TCTATGGGGCTACAT-TCATGGTCTCTTTTCTTAAATATCAA-GCTCTTC  48
      |||| ||||||||||  |||||| ||||| ||||||| |||| |||||||
seq2  TCTAAGGGGCTACATCCCATGGTTTCTTTCCTTAAAT-TCAAGGCTCTTC  49

seq1  CTTTGTCTTCTAGTAAATCATTGTATCTCCATCTTCAGTCATTATAGAAG  98
      ||||||| |||||||||||| |||||||||||||||||||| || |||||
seq2  CTTTGTCCTCTAGTAAATCA-TGTATCTCCATCTTCAGTCA-TAAAGAAG  97

seq1  ATTCTAAGCACAGGGATGCAGCCTAG-AAAAAAGTCATCACCTCCTGTAG  147
      |||||||||||| |||||||| |||| ||||||||||||| |||||||||
seq2  ATTCTAAGCACA-GGATGCAG-CTAGAAAAAAAGTCATCA-CTCCTGTAG  144

seq1  TTCTGCTGCCCACCCCTTGTCCTCTTTCTTTTCTTTCTTA-TTTTCCTTT  196
      ||||||||||||||| | || ||||||||||||||||||| |||||||||
seq2  TTCTGCTGCCCACCCATGGT-CTCTTTCTTTTCTTTCTTATTTTTCCTTT  193

seq1  CATTTTGTGATAGAAAG-AAGTATTATTTATAGGAACTAAAGGTCTTTGT  245
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CATTTTGTGATAGAAAGAAAGTATTATTTATAGGAACTAAAGGTCTTTGT  243

seq1  CCAAAATTAGCGAAGAAAATGGAAGAAAATCTATTTGAAC-AAAAAAAAA  294
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCAAAATTAGCGAAGAAAATGGAAGAAAATCTATTTGAACAAAAAAAAAA  293

seq1  AAAAGGATTAGACACTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACAT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGATTAGACACTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACAT  343

seq1  CATGACCAAG-AAGCAAGATGGGGAGGAAAGGGTTTATTCAGCTTACATT  393
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CATGACCAAGAAAGCAAGATGGGGAGGAAAGGGTTTATTCAGCTTACATT  393

seq1  TCCATACTGCTGTTGATCACCAAAGGATGCAGGACTGGAACTCAAGCAGG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATACTGCTGTTGATCACCAAAGGATGCAGGACTGGAACTCAAGCAGG  443

seq1  TCAGAAAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGG  493

seq1  CTTGCTTCACCTGGCTTGCTCAGCCTGCTCTCTTATAACACCCAAGACTA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTCACCTGGCTTGCTCAGCCTGCTCTCTTATAACACCCAAGACTA  543

seq1  CCAGCCCAGAGATGGTCCCACCCACAAGGGGCCTTTCCCCCTTGATCACT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCAGAGATGGTCCCACCCACAAGGGGCCTTTCCCCCTTGATCACT  593

seq1  AATTGAGAAAATGCCTTACAGTTGGATCTCATGGAGGCATTTCCTCAACT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAGAAAATGCCTTACAGTTGGATCTCATGGAGGCATTTCCTCAACT  643

seq1  GAAGCTCCTTTCTCTGTGATAACTCCAGCTGTGTCAAGTTGACACAAAAC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTCCTTTCTCTGTGATAACTCCAGCTGTGTCAAGTTGACACAAAAC  693

seq1  TAGCTAGTACAGACACAAAGTAAAGGAGTCTACAGAGTGGCCACACAGCA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTAGTACAGACACAAAGTAAAGGAGTCTACAGAGTGGCCACACAGCA  743

seq1  GGAAACAGAAATTGACGTGATTTTTCTCTTTTTGATATTTAGTTTGGTGA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAGAAATTGACGTGATTTTTCTCTTTTTGATATTTAGTTTGGTGA  793

seq1  TTTCCTTGCACTGCCAAATCACTTTCATTATGTTATGTCATGACAGTTCA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTGCACTGCCAAATCACTTTCATTATGTTATGTCATGACAGTTCA  843

seq1  GTATTTGTTACCAAAGACTTTATTGAGTCTCAATAATTCAAATTAGTTCT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGTTACCAAAGACTTTATTGAGTCTCAATAATTCAAATTAGTTCT  893

seq1  CTCGAAGAAGGCCAGATACCTATCCTGCCACAGCTCTGAACAATGACTAC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAAGAAGGCCAGATACCTATCCTGCCACAGCTCTGAACAATGACTAC  943

seq1  TCTTAAAAGTTCATTTCCTTGTAAGTGTGTCCATGTGTGTGCATTTGCAC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAAAGTTCATTTCCTTGTAAGTGTGTCCATGTGTGTGCATTTGCAC  993

seq1  ATGTGTGTGTGTGTGTGTGTGTGTGCGTGCACATGTGTGTGCGTAAGCGT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGTGTGTGTGTGTGTGTGTGCGTGCACATGTGTGTGCGTAAGCGT  1043

seq1  TGGTTCTGAAGAAACATGAGAGGCAAGCAACCTATAAGAAATACAGTATA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTGAAGAAACATGAGAGGCAAGCAACCTATAAGAAATACAGTATA  1093

seq1  ACTAATGGTTATAAAAATCTGTTCTAAGAGGTTGGAAAAGTTACTCAGTG  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATGGTTATAAAAATCTGTTCTAAGAGGTTGGAAAAGTTACTCAGTG  1143

seq1  GTTAAGAATTC  1154
      |||||||||||
seq2  GTTAAGAATTC  1154

seq1: chr7_102373694_102374827
seq2: B6Ng01-115D23.g_71_1195

seq1  GAATTCAACTTTGCCATCCAGTCACCCAACCAACAAAATTAGGTATGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTTTGCCATCCAGTCACCCAACCAACAAAATTAGGTATGAAT  50

seq1  TACCATTATTCTTTGTTAGAAAACAGAAACCATTGATGTTTATGTAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATTATTCTTTGTTAGAAAACAGAAACCATTGATGTTTATGTAAATG  100

seq1  GCGATCCAAGGAGGCAAATCAGGAACTTGCATATTGCATTTCAGTGTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGATCCAAGGAGGCAAATCAGGAACTTGCATATTGCATTTCAGTGTTGA  150

seq1  GTAAACCACTTACCCTCTTAGCACAAGCTTAGGAAGCTGACCTTTGCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACCACTTACCCTCTTAGCACAAGCTTAGGAAGCTGACCTTTGCTCC  200

seq1  ACTTAGTTGCTATTGCATTAGCACAGCCTCTTCTAAACAATAGTGTCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGTTGCTATTGCATTAGCACAGCCTCTTCTAAACAATAGTGTCAAA  250

seq1  CAATCTAAAACACTTCTTACCAACCCAACACACATGCAGAAAAGGCAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTAAAACACTTCTTACCAACCCAACACACATGCAGAAAAGGCAAAG  300

seq1  AAAATCTATTGAAAGAAAGGACAAGACTCTTCTAAAATTAAAGAAATGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTATTGAAAGAAAGGACAAGACTCTTCTAAAATTAAAGAAATGTT  350

seq1  TACTCAGAATACCAGGCCAGCTAAACTTATGAAGAACTACTCTGTACATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGAATACCAGGCCAGCTAAACTTATGAAGAACTACTCTGTACATA  400

seq1  GCTCAAGGACACACAAACTTGCCTGTTGTTTCATCTTTAAACTCAACACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAGGACACACAAACTTGCCTGTTGTTTCATCTTTAAACTCAACACT  450

seq1  TACATTACTTCTGGCTCTGAGATAAATTCTTTTCTAGAAGGAAAAACTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTACTTCTGGCTCTGAGATAAATTCTTTTCTAGAAGGAAAAACTTA  500

seq1  GGGCCTCCTACTTTTTAATCTAACTTTGCTTTTTATAAAAGAAACTGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCCTACTTTTTAATCTAACTTTGCTTTTTATAAAAGAAACTGCAG  550

seq1  TAAAATGCCTTGGTTATGACAGAAGAGTAAAAAGCAAACTCGCAAATAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGCCTTGGTTATGACAGAAGAGTAAAAAGCAAACTCGCAAATAAT  600

seq1  TTAGGACAGTCTTCATATAGTGTCCATCACTACAAACCACAGTGTTAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGACAGTCTTCATATAGTGTCCATCACTACAAACCACAGTGTTAGGT  650

seq1  GGCAGGGAGGTGGAAAAGCAGAATAATTCTTCAAAAATTAGCTACTTGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGAGGTGGAAAAGCAGAATAATTCTTCAAAAATTAGCTACTTGGC  700

seq1  TCTCTGAAACCCAGGTGGCTACTTGGCATGAGGAAGCCATCCAGTTCTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAAACCCAGGTGGCTACTTGGCATGAGGAAGCCATCCAGTTCTAG  750

seq1  AATGAAGCCTTGAGATAGTTTCACACCTGTCTTCATTTTTCTCCATGGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGCCTTGAGATAGTTTCACACCTGTCTTCATTTTTCTCCATGGTT  800

seq1  TTGCTTAACAGTTGTAATTCCCTTAATTTTATAAGTTAATAATTTTTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTAACAGTTGTAATTCCCTTAATTTTATAAGTTAATAATTTTTTAA  850

seq1  TTTAATATAATATATATTATTACATTTAATATATATTTTCATGCAATTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATATAATATATATTATTACATTTAATATATATTTTCATGCAATTTA  900

seq1  ATAGTGTATATTAATGATATATGTAATTTCATACTATTTATTTATGTAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTATATTAATGATATATGTAATTTCATACTATTTATTTATGTAAA  950

seq1  TATGTATGTGTGTGTAAATATATATATAAAAAACTTTGGCTACACTGATC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATGTGTGTGTAAATATATATATAAAAAACTTTGGCTACACTGATC  1000

seq1  TCCTCTCCTCACGCCCCCATTAGTGTCATCTCCCCCATTCAACAAATACT  1050
      | |||| ||||||  |||||||||||||||| |||||||||  |||||||
seq2  T-CTCT-CTCACG--CCCATTAGTGTCATCT-CCCCATTCACAAAATACT  1045

seq1  CAATCAACTAGAATTCATTTTATTTTGCTTCCTTTTGGTGTTGCTGTATG  1100
      ||||| ||||||||   |||||||||||||| |||  ||| |  ||||||
seq2  CAATC-ACTAGAATCATTTTTATTTTGCTTCTTTTATGTGCT--TGTATG  1092

seq1  CTACACT-GAGTTTAACCTAGACCTAGTAGGCATG  1134
      ||||||| |||||||  ||||||||||||||||||
seq2  CTACACTGGAGTTTA--CTAGACCTAGTAGGCATG  1125