BAC Information

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BAC

Clone NameB6Ng01-115J11
Chromosome7 (Build37)
Map Location 68,977,140 - 69,049,233
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100041229, LOC625287, D0Kist2, LOC100041248, LOC100041259, EG664943, B230209E15Rik, EG620934
Downstream geneLOC100041293, Ndn, Magel2, Mkrn3, Peg12, Atp5l-ps1, EG665038, LOC669222, LOC384631, LOC622243, EG622251
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115J11.bB6Ng01-115J11.g
ACCDH920815DH920816
length1,1241,088
definitionDH920815|Mus musculus domesticus DNA, BAC clone: B6Ng01-115J11, 5' end.DH920816|Mus musculus domesticus DNA, BAC clone: B6Ng01-115J11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,977,140 - 68,978,273)(69,048,144 - 69,049,233)
sequence
gaattcaataatcacatgcacagagatttttgtaggaaaaacagccatca
gtttccttaccatagaacttgagaagctgctggtccctttaagagcagca
tttacaatcatctcctagcatggcttctcaagccacattagacttctaac
taaaggtgcagggctccaaagtccaattgatactgtttatttttttttct
ttttttctttcaccacattttacccagatagtcagagagtactgcttttc
tcaaacctggtctctcatgtgtaaactatctctagtcaggttataaaaca
cctatgagaattaccttcacttctctagattttcacatagctctaaacac
atacacaaaaacacacaaatcagaaacaaacagatccagtcacacacaat
catttctagtcctccacaagcaggcaaaagaactacacaatttcggaggg
ggaaccttctgcttcatcaccaaaacttgttccctctgactgatctccag
agactaccaggcatccctggctctccccacttctcagggtgtgcccccgg
gcagcagcctgtggtgctcctagctgcaaataccaaacatgtgtgtttaa
gaaaaccccatcatctacaaacaccatcacccgcttccaccagaaggacc
aaaaccagagaaaccaaactcaggcagatccaaacttaggctgatgagaa
taaactcaggctgatcagtatctaaactcaggcagatccaaactcagact
gtgctgtgcttcagaaacaaaggacaagacacagacagacaaaccaacac
aacaagctcacattcgcttcagaaaactgaaaaaaaaaaaaaaaacaaaa
aaaaaacaaacaaaaaaaaaaaccagacactcagaacagacacactgacc
ggcatgcacattccagaggggatcctgatacctccaagtcaggtcttgtg
tgtgaggggtggtcctcatttcccgggccaatacaccaaatgaaagaccc
acatgtgaagtcaacagaactccccgacgtctgactcagagatgcgacac
cccaagtcactcacgagaaacagtctgctgaaactgcccagattttaatt
tcagatgctctcggccccagtcaa
gaattcccaacaacggagattacatgtacactagttatataatatccact
catccaaattccacagtatgtatagatgccggattcatgaagtgatatgc
tcactagagtgattgggctcagggaatgaattatttcagcaatgctttct
ctgaaaagatacacaagttccagtagatttactgaatatccaagtatata
caggtgatctaatttatctcagtttttattaaagacatgatatgaaatag
tgatagtggtgattagagaggaaatatagaatagctttttccaaacacaa
aatatgcttatagaagaaaatattttagaaaagtgaattatacctgagaa
acataaattaagtatgcattcatgcagagagctgtgtacccacacataaa
gtattacacagaaaattttagaaaaaaaatatgtcaattctaaaagagat
acttcttaaataatttgtttatcattattacactgagatatattcttggt
aattgaaaacatttggagcagtgctcaacatcaactctcctttttataac
ccaaggagtttctttagatcactatcatagacataaatatatcatgtaat
gatatgattaaagcatagtatttggggaaattgacaaaggatgatcacaa
aaaatcaacaacattgagtagtatatgacccagagttataatcagaaaag
cataccgagaggtttattttatttagccaggatctaagtgaagcaatcaa
atacacaatcattccccaggcaacaatggctatttatgtctattattaat
tagaaccagaactcaggataaatttcattttatcttgtcttccatttttc
agttgcccccttgatcctccaacatatatggagaatatagagatatgtga
atcagaatcataatagaaatcaccaagttaatagcaggctatgaatttct
ctccctagatttaagatctcctatatggattttttctaatctattttcta
ttcaatgttcaagcttgaaaaaagaaggcaccacgggcttataaaagtct
ggacaggttggattttaccagtctggctacacgcttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_68977140_68978273
seq2: B6Ng01-115J11.b_47_1170

seq1  GAATTCAATAATCACATGCACAGAGATTTTTGTAGGAAAAACAGCCATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAATCACATGCACAGAGATTTTTGTAGGAAAAACAGCCATCA  50

seq1  GTTTCCTTACCATAGAACTTGAGAAGCTGCTGGTCCCTTTAAGAGCAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCTTACCATAGAACTTGAGAAGCTGCTGGTCCCTTTAAGAGCAGCA  100

seq1  TTTACAATCATCTCCTAGCATGGCTTCTCAAGCCACATTAGACTTCTAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAATCATCTCCTAGCATGGCTTCTCAAGCCACATTAGACTTCTAAC  150

seq1  TAAAGGTGCAGGGCTCCAAAGTCCAATTGATACTGTTTATTTTTTTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTGCAGGGCTCCAAAGTCCAATTGATACTGTTTATTTTTTTTTCT  200

seq1  TTTTTTCTTTCACCACATTTTACCCAGATAGTCAGAGAGTACTGCTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTTCACCACATTTTACCCAGATAGTCAGAGAGTACTGCTTTTC  250

seq1  TCAAACCTGGTCTCTCATGTGTAAACTATCTCTAGTCAGGTTATAAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACCTGGTCTCTCATGTGTAAACTATCTCTAGTCAGGTTATAAAACA  300

seq1  CCTATGAGAATTACCTTCACTTCTCTAGATTTTCACATAGCTCTAAACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGAGAATTACCTTCACTTCTCTAGATTTTCACATAGCTCTAAACAC  350

seq1  ATACACAAAAACACACAAATCAGAAACAAACAGATCCAGTCACACACAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACAAAAACACACAAATCAGAAACAAACAGATCCAGTCACACACAAT  400

seq1  CATTTCTAGTCCTCCACAAGCAGGCAAAAGAACTACACAATTTCGGAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTAGTCCTCCACAAGCAGGCAAAAGAACTACACAATTTCGGAGGG  450

seq1  GGAACCTTCTGCTTCATCACCAAAACTTGTTCCCTCTGACTGATCTCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCTTCTGCTTCATCACCAAAACTTGTTCCCTCTGACTGATCTCCAG  500

seq1  AGACTACCAGGCATCCCTGGCTCTCCCCACTTCTCAGGGTGTGCCCCCGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTACCAGGCATCCCTGGCTCTCCCCACTTCTCAGGGTGTGCCCCCGG  550

seq1  GCAGCAGCCTGTGGTGCTCCTAGCTGCAAATACCAAACATGTGTGTTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGCCTGTGGTGCTCCTAGCTGCAAATACCAAACATGTGTGTTTAA  600

seq1  GAAAACCCCATCATCTACAAACACCATCACCCGCTTCCACCAGAAGGACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCCCATCATCTACAAACACCATCACCCGCTTCCACCAGAAGGACC  650

seq1  AAAACCAGAGAAACCAAACTCAGGCAGATCCAAACTTAGGCTGATGAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAGAGAAACCAAACTCAGGCAGATCCAAACTTAGGCTGATGAGAA  700

seq1  TAAACTCAGGCTGATCAGTATCTAAACTCAGGCAGATCCAAACTCAGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCAGGCTGATCAGTATCTAAACTCAGGCAGATCCAAACTCAGACT  750

seq1  GTGCTGTGCTTCAGAAACAAAGGACAAGACACAGACAGACAAACCAACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTGCTTCAGAAACAAAGGACAAGACACAGACAGACAAACCAACAC  800

seq1  AACAAGCTCACATTCGCTTCAGAAAACTGAAAAAAAAAAAAAAAACAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGCTCACATTCGCTTCAGAAAACTGAAAAAAAAAAAAAAAACAAAA  850

seq1  AAAAAACAAACAAAAAAAAAAACCAGACACTCAGAACAGACACACTGACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACAAACAAAAAAAAAAACCAGACACTCAGAACAGACACACTGACC  900

seq1  GGCATGCACATTCCAGAGGGGATCCTGATACCTCCAAGTCAGGTCTTGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGCACATTCCAGAGGGGATCCTGATACCTCCAAGTCAGGTCTTGTG  950

seq1  TGTGAGGGGTGGT-CTCATTTCCCGGGCCAATACACCAAATGAAAGACCC  999
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGTGAGGGGTGGTCCTCATTTCCCGGGCCAATACACCAAATGAAAGACCC  1000

seq1  ACAATGTGAGGTCAACAGAACTCCCCGACGTTCTGACTCAGGAGATGCGA  1049
      || |||||| |||||||||||||||||||| ||||||||| |||||||||
seq2  AC-ATGTGAAGTCAACAGAACTCCCCGACG-TCTGACTCA-GAGATGCGA  1047

seq1  CACCCCAAGTCACTCACGAGAAACAGTCTTGCTGAAAACTGCCACAGGAT  1099
      |||||||||||||||||||||||||||| ||||| |||||||| || |||
seq2  CACCCCAAGTCACTCACGAGAAACAGTC-TGCTG-AAACTGCC-CA-GAT  1093

seq1  TTTTATTTCAAGATTGCTCTCGGGCCCACAGTCAA  1134
      ||| ||||| ||| |||||||||  || |||||||
seq2  TTTAATTTC-AGA-TGCTCTCGG--CCCCAGTCAA  1124

seq1: chr7_69048144_69049233
seq2: B6Ng01-115J11.g_68_1155 (reverse)

seq1  AAAAGC-TGTAGCCAGACTGGTAAAAATCCAACCTGTCCAGACTTTTATA  49
      | |||| ||||||||||||||| |||||||||||||||||||||||||||
seq2  ACAAGCGTGTAGCCAGACTGGT-AAAATCCAACCTGTCCAGACTTTTATA  49

seq1  AGCCCGTGTTGCCTCTTTTTTTCAAAGCTTGAACAATTGAATAGAAAATA  99
      |||||||| |||||  ||||||| |||||||||| |||||||||||||||
seq2  AGCCCGTGGTGCCTTCTTTTTTC-AAGCTTGAAC-ATTGAATAGAAAATA  97

seq1  GATTAAGAAAAATCCATATA-GAGATCTTAAATCTAGGGAGAGAAATCAA  148
      |||||  ||||||||||||| ||||||||||||||||||||||||||  |
seq2  GATTAGAAAAAATCCATATAGGAGATCTTAAATCTAGGGAGAGAAATTCA  147

seq1  TAGCCTGCTATAAACTTGGTGATTTCTATTATTGATTCTGATTCACATAT  198
      ||||||||||| ||||||||||||||||||| ||||||||||||||||||
seq2  TAGCCTGCTATTAACTTGGTGATTTCTATTA-TGATTCTGATTCACATAT  196

seq1  CTCTATATTCTCCATATATGTTGGAGGATCAAGGGGGCAACTGAAAAATG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATATTCTCCATATATGTTGGAGGATCAAGGGGGCAACTGAAAAATG  246

seq1  GAAGACAAGATAAAATGAAATTTATCCTGAGTTCTGGTTCTAATTAATAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACAAGATAAAATGAAATTTATCCTGAGTTCTGGTTCTAATTAATAA  296

seq1  TAGACATAAATAGCCATTGTTGCCTGGGGAATGATTGTGTATTTGATTGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACATAAATAGCCATTGTTGCCTGGGGAATGATTGTGTATTTGATTGC  346

seq1  TTCACTTAGATCCTGGCTAAATAAAATAAACCTCTCGGTATGCTTTTCTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTAGATCCTGGCTAAATAAAATAAACCTCTCGGTATGCTTTTCTG  396

seq1  ATTATAACTCTGGGTCATATACTACTCAATGTTGTTGATTTTTTGTGATC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAACTCTGGGTCATATACTACTCAATGTTGTTGATTTTTTGTGATC  446

seq1  ATCCTTTGTCAATTTCCCCAAATACTATGCTTTAATCATATCATTACATG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTGTCAATTTCCCCAAATACTATGCTTTAATCATATCATTACATG  496

seq1  ATATATTTATGTCTATGATAGTGATCTAAAGAAACTCCTTGGGTTATAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTATGTCTATGATAGTGATCTAAAGAAACTCCTTGGGTTATAAA  546

seq1  AAGGAGAGTTGATGTTGAGCACTGCTCCAAATGTTTTCAATTACCAAGAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAGTTGATGTTGAGCACTGCTCCAAATGTTTTCAATTACCAAGAA  596

seq1  TATATCTCAGTGTAATAATGATAAACAAATTATTTAAGAAGTATCTCTTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTCAGTGTAATAATGATAAACAAATTATTTAAGAAGTATCTCTTT  646

seq1  TAGAATTGACATATTTTTTTTCTAAAATTTTCTGTGTAATACTTTATGTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTGACATATTTTTTTTCTAAAATTTTCTGTGTAATACTTTATGTG  696

seq1  TGGGTACACAGCTCTCTGCATGAATGCATACTTAATTTATGTTTCTCAGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTACACAGCTCTCTGCATGAATGCATACTTAATTTATGTTTCTCAGG  746

seq1  TATAATTCACTTTTCTAAAATATTTTCTTCTATAAGCATATTTTGTGTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTCACTTTTCTAAAATATTTTCTTCTATAAGCATATTTTGTGTTT  796

seq1  GGAAAAAGCTATTCTATATTTCCTCTCTAATCACCACTATCACTATTTCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAGCTATTCTATATTTCCTCTCTAATCACCACTATCACTATTTCA  846

seq1  TATCATGTCTTTAATAAAAACTGAGATAAATTAGATCACCTGTATATACT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATGTCTTTAATAAAAACTGAGATAAATTAGATCACCTGTATATACT  896

seq1  TGGATATTCAGTAAATCTACTGGAACTTGTGTATCTTTTCAGAGAAAGCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATTCAGTAAATCTACTGGAACTTGTGTATCTTTTCAGAGAAAGCA  946

seq1  TTGCTGAAATAATTCATTCCCTGAGCCCAATCACTCTAGTGAGCATATCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGAAATAATTCATTCCCTGAGCCCAATCACTCTAGTGAGCATATCA  996

seq1  CTTCATGAATCCGGCATCTATACATACTGTGGAATTTGGATGAGTGGATA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATGAATCCGGCATCTATACATACTGTGGAATTTGGATGAGTGGATA  1046

seq1  TTATATAACTAGTGTACATGTAATCTCCGTTGTTGGGAATTC  1090
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAACTAGTGTACATGTAATCTCCGTTGTTGGGAATTC  1088