BAC Information

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BAC

Clone NameB6Ng01-116N21
Chromosome7 (Build37)
Map Location 98,729,115 - 98,796,173
singlet/doubletdoublet
Overlap geneDlg2
Upstream geneLOC666689, LOC621816, LOC100039943
Downstream geneCcdc90b, Ankrd42, Pcf11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116N21.bB6Ng01-116N21.g
ACCDH921756DH921757
length1,1651,108
definitionDH921756|Mus musculus domesticus DNA, BAC clone: B6Ng01-116N21, 5' end.DH921757|Mus musculus domesticus DNA, BAC clone: B6Ng01-116N21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,794,987 - 98,796,173)(98,729,115 - 98,730,236)
sequence
gaattctgtacaagagaagcctccagttacttccttgctaaagggaaaaa
gtgagtagaaaacaaaacaaaacaaaaagtttatgacatgatctaccttt
ggggtatagaagatcatcaattaggcagagattggagtcacaaaccagcc
acaacagtggtgattgacagccttgggtacctatgtttgaattcatgaca
acaaaaaaaccacttcagagacttttttcatcaaatgccaaatttgtaat
ttcatcaaatgccaaatttgtaagggaaaaacgcattttagcagaggaca
tttcactgaatcaagtgaaaagtatttacttgtatttattgattcagtta
cttggtgtatttctattgcacatgtagttgtcccaccttgattttcccct
cagctttccctgtcttgagcctctactgggatggtggtctgtcagttatc
tagggtgctggagcagattctgggggcaagattcatggagttctgtggat
cactaagatcaaaatacagatttattatgaatactaaatgcaaaagtaat
aacaagcatgaaaaatcttaatatttaaccccaaattacaccaattgtta
gttcataactttggtacagaaaatactgtatgctttacttttaaatttta
actcacatacaggcaacagactcaaagaaaagtataaatttggtgctccc
aacactaagcatatttatctggttttaaaatagtgaagcaagatttgttc
catccctgcaatgttgacatgttagtaacaaagccatagggagagctgtg
ccaaccttcatcctgtgaacttgaaattcatgtccattaaagcaggacat
gctgctttcagtcctcccccccccgcccccccgctggcgcaactgcaccc
catgcactgccaatgacaccaggcattgctctgagggatcctttagtcta
gcaaagaacacagactttcaaagaataatgaccacactatgggaaatcaa
agaaacagcacaatgggaaaggtgactaggatgtgcatgggagcagatag
agaaagctacctggagatcagagagttgaccagatggtcagcttgttgaa
tgactgaagtatgagtttcagacaaagtttagcaactccatctccattcc
caattcttaccttga
gaattctgaatagggactgggattgtttgactttactctgttgtcaatct
gaaacatctggatatatcaaacacccataatactgacctctttaatatat
tgttggctttaaaaaaattgtagcatctagccgggcattggtggctcatg
cctttaatcccagcacttgggaggcagaggcaggcagatttctgagttca
aggccagcctggtctacagagtgagttccaggagagccagagctacacag
agaaaccctgtcttgaaaaaaaaacaaaaaaaacaaaaggagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaga
agaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaaatt
tggagcatctcactgtgtagtccagcctgccctcagatttctatctccct
gtcttacctcctgagtgccaggatttcaatgggcatcaccactcctgggt
ctgtgtcatatacacttagaataaagatatgaaataatttttaatcagca
agagatttgtgttgtaattctgaattgctgtaaaatgaaaacagcatatg
gtgaaaagcctttaatagtccacactttgggttgaatcgctcagcaggta
agagcactatttccttttctagaagacaaaggttggattaccagcaccca
catggtggttcacaaccatctgtgaagtgtatactatttactggcctcct
cgtgcactgtagaaagttggtgcaagacacatatgcaatcataacgccaa
tacatgtaaaataaaaaataagcttagaatattatgttctgatctacatt
ctgataaatgaacttatttgaggagtacaaataaatgaagaacaaggttc
tttgtggattgcaagccatcatgagtactccagtgcactgtctcaattca
ccctaggtgccatgtatagcatattaatgctgcctatctattcctcatga
catttttcatgtttatttttcaagatttctcattctgtcaaatcatcaaa
tttgtaacagaacttatttcctccatttttgtccttggacatttacatgt
gcctatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_98794987_98796173
seq2: B6Ng01-116N21.b_48_1212 (reverse)

seq1  TCAAGGTAAGAATTTGGTGAAATGAAGATGGAGTTTTGCTAAACTTTTGT  50
      |||||||||||||| ||   |||| ||||||||  ||||||||| |||||
seq2  TCAAGGTAAGAATTGGG---AATGGAGATGGAG--TTGCTAAAC-TTTGT  44

seq1  CCCTGAAAACTTCATTAACCTTTCAGTCATTCAAC-AGCTGACCATCCTG  99
        ||||||   ||||  ||  |||||||||||||| |||||||||| |||
seq2  --CTGAAA--CTCAT--AC--TTCAGTCATTCAACAAGCTGACCAT-CTG  85

seq1  GTCAACCTCTCTGATCTCCAGTTAGCCTTTCTCTATCCTTGCTCCCATGC  149
      ||||| ||||||||||||||| ||| |||||||||||  |||||||||| 
seq2  GTCAA-CTCTCTGATCTCCAGGTAG-CTTTCTCTATC--TGCTCCCATG-  130

seq1  CACATCCTAGTCACCTTTCCCATTGTTGCTTGTTTCTTTGATTTCCCATA  199
      ||||||||||||||||||||||||| ||| ||||||||||||||||||||
seq2  CACATCCTAGTCACCTTTCCCATTG-TGC-TGTTTCTTTGATTTCCCATA  178

seq1  GTGTGGTCATTATTCTTTGGAAAGTCTGTGTTCTTTGCTAGACTAAAGGA  249
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GTGTGGTCATTATTCTTT-GAAAGTCTGTGTTCTTTGCTAGACTAAAGGA  227

seq1  TCCCTCAGAGCAATGCCTGGTGTCATTGGCAGTGCATGGGGTGCAGTTGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCAGAGCAATGCCTGGTGTCATTGGCAGTGCATGGGGTGCAGTTGC  277

seq1  GCCAGCGGGGGGGCGGGGGGGGGAGGACTGAAAGCAGCATGTCCTGCTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCGGGGGGGCGGGGGGGGGAGGACTGAAAGCAGCATGTCCTGCTTT  327

seq1  AATGGACATGAATTTCAAGTTCACAGGATGAAGGTTGGCACAGCTCTCCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGACATGAATTTCAAGTTCACAGGATGAAGGTTGGCACAGCTCTCCC  377

seq1  TATGGCTTTGTTACTAACATGTCAACATTGCAGGGATGGAACAAATCTTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCTTTGTTACTAACATGTCAACATTGCAGGGATGGAACAAATCTTG  427

seq1  CTTCACTATTTTAAAACCAGATAAATATGCTTAGTGTTGGGAGCACCAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTATTTTAAAACCAGATAAATATGCTTAGTGTTGGGAGCACCAAA  477

seq1  TTTATACTTTTCTTTGAGTCTGTTGCCTGTATGTGAGTTAAAATTTAAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACTTTTCTTTGAGTCTGTTGCCTGTATGTGAGTTAAAATTTAAAA  527

seq1  GTAAAGCATACAGTATTTTCTGTACCAAAGTTATGAACTAACAATTGGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGCATACAGTATTTTCTGTACCAAAGTTATGAACTAACAATTGGTG  577

seq1  TAATTTGGGGTTAAATATTAAGATTTTTCATGCTTGTTATTACTTTTGCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGGGGTTAAATATTAAGATTTTTCATGCTTGTTATTACTTTTGCA  627

seq1  TTTAGTATTCATAATAAATCTGTATTTTGATCTTAGTGATCCACAGAACT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTATTCATAATAAATCTGTATTTTGATCTTAGTGATCCACAGAACT  677

seq1  CCATGAATCTTGCCCCCAGAATCTGCTCCAGCACCCTAGATAACTGACAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAATCTTGCCCCCAGAATCTGCTCCAGCACCCTAGATAACTGACAG  727

seq1  ACCACCATCCCAGTAGAGGCTCAAGACAGGGAAAGCTGAGGGGAAAATCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCATCCCAGTAGAGGCTCAAGACAGGGAAAGCTGAGGGGAAAATCA  777

seq1  AGGTGGGACAACTACATGTGCAATAGAAATACACCAAGTAACTGAATCAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGGACAACTACATGTGCAATAGAAATACACCAAGTAACTGAATCAA  827

seq1  TAAATACAAGTAAATACTTTTCACTTGATTCAGTGAAATGTCCTCTGCTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACAAGTAAATACTTTTCACTTGATTCAGTGAAATGTCCTCTGCTA  877

seq1  AAATGCGTTTTTCCCTTACAAATTTGGCATTTGATGAAATTACAAATTTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCGTTTTTCCCTTACAAATTTGGCATTTGATGAAATTACAAATTTG  927

seq1  GCATTTGATGAAAAAAGTCTCTGAAGTGGTTTTTTTGTTGTCATGAATTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGATGAAAAAAGTCTCTGAAGTGGTTTTTTTGTTGTCATGAATTC  977

seq1  AAACATAGGTACCCAAGGCTGTCAATCACCACTGTTGTGGCTGGTTTGTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAGGTACCCAAGGCTGTCAATCACCACTGTTGTGGCTGGTTTGTG  1027

seq1  ACTCCAATCTCTGCCTAATTGATGATCTTCTATACCCCAAAGGTAGATCA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAATCTCTGCCTAATTGATGATCTTCTATACCCCAAAGGTAGATCA  1077

seq1  TGTCATAAACTTTTTGTTTTGTTTTGTTTTCTACTCACTTTTTCCCTTTA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATAAACTTTTTGTTTTGTTTTGTTTTCTACTCACTTTTTCCCTTTA  1127

seq1  GCAAGGAAGTAACTGGAGGCTTCTCTTGTACAGAATTC  1187
      ||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGAAGTAACTGGAGGCTTCTCTTGTACAGAATTC  1165

seq1: chr7_98729115_98730236
seq2: B6Ng01-116N21.g_68_1175

seq1  GAATTCTGAATAGGGACTGGGATTGTTTGACTTTACTCTGTTGTCAATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAATAGGGACTGGGATTGTTTGACTTTACTCTGTTGTCAATCT  50

seq1  GAAACATCTGGATATATCAAACACCCATAATACTGACCTCTTTAATATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATCTGGATATATCAAACACCCATAATACTGACCTCTTTAATATAT  100

seq1  TGTTGGCTTTAAAAAAATTGTAGCATCTAGCCGGGCATTGGTGGCTCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGCTTTAAAAAAATTGTAGCATCTAGCCGGGCATTGGTGGCTCATG  150

seq1  CCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCA  200

seq1  AGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGAGAGCCAGAGCTACACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGAGAGCCAGAGCTACACAG  250

seq1  AGAAACCCTGTCTTGAAAAAAAAACAAAAAAAACAAAAGGAGAAGAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||   |||||||
seq2  AGAAACCCTGTCTTGAAAAAAAAACAAAAAAAACAAAAGG---AGAAGAA  297

seq1  GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA  347

seq1  AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAA  397

seq1  ATTTGGAGCATCTCACTGTGTAGTCCAGCCTGCCCTCAGATTTCTATCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGAGCATCTCACTGTGTAGTCCAGCCTGCCCTCAGATTTCTATCTC  447

seq1  CCTGTCTTACCTCCTGAGTGCCAGGATTTCAATGGGCATCACCACTCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTTACCTCCTGAGTGCCAGGATTTCAATGGGCATCACCACTCCTG  497

seq1  GGTCTGTGTCATATACACTTAGAATAAAGATATGAAATAATTTTTAATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTGTCATATACACTTAGAATAAAGATATGAAATAATTTTTAATCA  547

seq1  GCAAGAGATTTGTGTTGTAATTCTGAATTGCTGTAAAATGAAAACAGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAGATTTGTGTTGTAATTCTGAATTGCTGTAAAATGAAAACAGCAT  597

seq1  ATGGTGAAAAGCCTTTAATAGTCCACACTTTGGGTTGAATCGCTCAGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGAAAAGCCTTTAATAGTCCACACTTTGGGTTGAATCGCTCAGCAG  647

seq1  GTAAGAGCACTATTTCCTTTTCTAGAAGACAAAGGTTGGATTACCAGCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAGCACTATTTCCTTTTCTAGAAGACAAAGGTTGGATTACCAGCAC  697

seq1  CCACATGGTGGTTCACAACCATCTGTGAAGTGTATACTATTTACTGGCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGGTGGTTCACAACCATCTGTGAAGTGTATACTATTTACTGGCCT  747

seq1  CCTCGTGCACTGTAGAAAGTTGGTGCAAGACACATATGCAATCATAACGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGTGCACTGTAGAAAGTTGGTGCAAGACACATATGCAATCATAACGC  797

seq1  CAATACATGTAAAATAAAAAATAAGCTTAGAATATTATGTTCTGATCTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACATGTAAAATAAAAAATAAGCTTAGAATATTATGTTCTGATCTAC  847

seq1  ATTCTGATAAATGAACTTATTTGAGGAGTACAAATAAATGAAGAACAAAG  900
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATTCTGATAAATGAACTTATTTGAGGAGTACAAATAAATGAAGAAC-AAG  896

seq1  GTTCTTTGTGGATTGCAAGCCATCATGAGTACTCCAGTGCACTGTCTCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTGTGGATTGCAAGCCATCATGAGTACTCCAGTGCACTGTCTCAA  946

seq1  TTCACCCTAGGTGCCATGTATAGCATTATTAATGCTTGCCTATCTATCCT  1000
      ||||||||||||||||||||||||| ||||||||| ||||||||||| | 
seq2  TTCACCCTAGGTGCCATGTATAGCA-TATTAATGC-TGCCTATCTATTCC  994

seq1  TCATGACATTTTTCATG-TTATTTTTCCAAAGAATCTCTCATTCTGTCCA  1049
      ||||||||||||||||| |||||||||  ||| || ||||||||||||  
seq2  TCATGACATTTTTCATGTTTATTTTTC--AAG-ATTTCTCATTCTGTC--  1039

seq1  AAATCATCAAATCTGTAACATTAAAATTATATTCTCCATTTTTGTCCTTT  1099
      |||||||||||| |||||||   || |||| | |||||||||||||||| 
seq2  AAATCATCAAATTTGTAACA--GAACTTATTTCCTCCATTTTTGTCCTTG  1087

seq1  GACAATTTTACATGTGGCTATAC  1122
      ||||  |||||||||| ||||||
seq2  GACA--TTTACATGTGCCTATAC  1108