BAC Information

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BAC

Clone NameB6Ng01-117G22
Chromosome7 (Build37)
Map Location 22,375,284 - 22,376,200
singlet/doubletsinglet
Overlap geneLOC100043604
Upstream geneLOC667311, LOC100043561, LOC667302, EG667292, LOC100043566, LOC100043569, EG436135, LOC100042996, EG667273, EG667268, EG667262, EG667259, LOC100043574, LOC100043576, Gm1447, LOC100043006, LOC100043583, EG435953, LOC673902, EG667240, EG435951, Gm1446, LOC381937, LOC100043588, LOC670764, EG667215, LOC100043013, LOC621561, EG667199, EG621510, LOC667186, EG628475, LOC100043595, LOC100043596, LOC667358, LOC100043016, LOC100043602
Downstream geneEG667378, LOC100043607, LOC100043019, LOC100043025, EG667404, EG435940, LOC100043026, EG545929, LOC667421, LOC100043614, LOC667431, LOC100043029, EG620736, EG667444, LOC100043033, LOC100043037, EG667464, EG667469, EG667472, EG667094, LOC100043625, LOC100043626, LOC100043043, LOC100043048, LOC100043632, EG667485, V1rd14, LOC100043051, LOC100043058, EG435947, EG667504, EG667512, LOC100043061, LOC100043638
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-117G22.bB6Ng01-117G22.g
ACCDH922174DH922175
length1,023919
definitionDH922174|Mus musculus domesticus DNA, BAC clone: B6Ng01-117G22, 5' end.DH922175|Mus musculus domesticus DNA, BAC clone: B6Ng01-117G22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttaagtaattctaatacgacctgcctttatatatttcttgacct
tgttcccttaatgcttttaatattctgtcattatttagtgcatttgttat
tctgattattatgtgtcaggagaaatttcttttctggtccagtctatttg
gagttctgtagtcttctcatatgttcattggcatttccttctttaggtat
gggaagttttcttcaataaattttgttgaagatatttgctggccctttaa
gttgaaaatcttcattctcatctatatctattatccttagctttggtctt
ctaattgtgtcctggattttctggatattttgtgttaagatatctttgga
ttttgcattttctttgattgctgtgtccaaccaaatgaccccaagaaaaa
agctggagtagccattctaatatcaaataaaatcgactttaaaccaacag
ttatcataaaaggtataaaaggacacttcatactgatcaaaggaaaaatc
taccaaaaagaactctcaattatgaacatctatgctccaaatgcaaggag
acacatattcataaatgaaacattattaaagctaaaagcacacatttcac
ctcacacaatactagtgggagacttcatcaccccactctcatcaatggac
agatcatggaagtagaaactaaacagagacacagtaaaagaacacaaatt
aagaactaaatgcccaggagaggtattgcgggatcctcctgtggtactat
gtccaattttttgaggaaacgccagactgatttccagagtggttgtacaa
gctttgcaatcccaccagcaatggtggggtgttcctctttctcaacatcc
tcgccagcatctgctgtcacctgatttttgatcttagccattctgattgg
ttttgagatgggatctcaggctggtttgatttgcattccctgatgattag
atgcttgaacattttttcagggctactcagccatttagattctcaggtga
gatcttttatagtcctgagctat
gaattctttaaagaaagtaaaaaagaaagagaaaagaaaaaaaaaagaaa
agaacttcaggaaagagagagagagagagagagagagagagagagagaga
gagagagagagagagagagagaaagagaatgagagagagagaatgaaaat
agtaaatgggcttttcaagggagacacagtttcttggcagtagatagaca
taggatcttttttttttcttttttttttttggcaattgattttttactac
acaacaaggttgtaaaatgagaattggtcaaaccaaggcacagagatgag
aaatttcttggcgggaatcttcaagaagtgtagggacaaacgacataaat
ttatagaatgaacagttgtaaaatcatcagacaacaccaaatcgttaacc
atttagagttcaaagttttgtttttttgctttttttaattaggtattttc
ctcatttacattttcaatgctatcccaaaggtcccccatacccacccccc
cccaatcccctaccaacccactccccctttttggccctggcgttcccctg
tactgaggcatataaagtttgcaagtccaatgggcctctctttgcagtga
tggccgactaggccatcttttgatacatatgcagctagagtcaagagctc
ccgggtactggttagctcatattgttgttccacctgtagggttgcagttc
ctatagctccttgggtaatttctctagctcctccattaggggccgtgtga
cccatccaatagctgactgtgatcatccacttctgtgtttgctaggcccc
ggcatagtctcacaagagagagctataaactgggtcctttcagcgaaatc
tttgctagtgtttgcaatggtgtcagcatttggaagctgattatgggatg
gatccttgcatatggcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_22375284_22376200
seq2: B6Ng01-117G22.g_66_983

seq1  GAATTCTTTAAAGAAAGTAAAAAAGAAAGAGAAAAGAAAAAAAAAAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAAGAAAGTAAAAAAGAAAGAGAAAAGAAAAAAAAAAGAAA  50

seq1  AGAACTTCAGGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTCAGGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  100

seq1  GAGAGAGAGAGAGAGAGAGAGAAAGAGAATGAGAGAGAGAGAATGAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAAAGAGAATGAGAGAGAGAGAATGAAAAT  150

seq1  AGTAAATGGGCTTTTCAAGGGAGACACAGTTTCTTGGCAGTAGATAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATGGGCTTTTCAAGGGAGACACAGTTTCTTGGCAGTAGATAGACA  200

seq1  TAGGATCTTTTTTTTTTCTTTTTTTTTTTTGGCAATTGATTTTTTACTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATCTTTTTTTTTTCTTTTTTTTTTTTGGCAATTGATTTTTTACTAC  250

seq1  ACAACAAGGTTGTAAAATGAGAATTGGTCAAACCAAGGCACAGAGATGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAAGGTTGTAAAATGAGAATTGGTCAAACCAAGGCACAGAGATGAG  300

seq1  AAATTTCTTGGCGGGAATCTTCAAGAAGTGTAGGGACAAACGACATAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCTTGGCGGGAATCTTCAAGAAGTGTAGGGACAAACGACATAAAT  350

seq1  TTATAGAATGAACAGTTGTAAAATCATCAGACAACACCAAATCGTTAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGAATGAACAGTTGTAAAATCATCAGACAACACCAAATCGTTAACC  400

seq1  ATTTAGAGTTCAAAGTTTTGTTTTTTTGCTTTTTTTAATTAGGTATTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAGTTCAAAGTTTTGTTTTTTTGCTTTTTTTAATTAGGTATTTTC  450

seq1  CTCATTTACATTTTCAATGCTATCCCAAAGGTCCCCCATACCCACCCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTACATTTTCAATGCTATCCCAAAGGTCCCCCATACCCACCCCCC  500

seq1  CCCAATCCCCTACCAACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATCCCCTACCAACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTG  550

seq1  TACTGAGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTGCAGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTGCAGTGA  600

seq1  TGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTC  650

seq1  CCGGGTACTGGTTAGCTCATATTGTTGTTCCACCTGTAGGGTTGCAGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCGGGTACTGGTTAGCTCATATTGTTGTTCCACCTGTAGGGTTGCAGTT-  699

seq1  CCTATAGCTCCTTGGGTAATTTCTCTAGCTCCTCCATTAGGGGCCGTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATAGCTCCTTGGGTAATTTCTCTAGCTCCTCCATTAGGGGCCGTGTG  749

seq1  ACCCATCCAATAGCTGACTGTGATCATCCACTTCTGTGTTTGCTAGGCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATCCAATAGCTGACTGTGATCATCCACTTCTGTGTTTGCTAGGCCC  799

seq1  CGGCATAGTCTCACAAGAGAGAGCTAT-AACTGGGTCCTTTCAGCGAAAT  849
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CGGCATAGTCTCACAAGAGAGAGCTATAAACTGGGTCCTTTCAGCGAAAT  849

seq1  C-TTGCTAGTGTATGCAATGGTGTCAGCATTTGGAAGCTGATTATGGGAT  898
      | |||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTAGTGTTTGCAATGGTGTCAGCATTTGGAAGCTGATTATGGGAT  899

seq1  GGATCCCTGCATATGGCAG  917
      |||||| ||||||||||||
seq2  GGATCCTTGCATATGGCAG  918