BAC Information

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BAC

Clone NameB6Ng01-117J07
Chromosome7 (Build37)
Map Location 112,854,208 - 112,855,337
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035, Olfr688, Olfr689, Olfr690, Olfr691, Olfr692, EG545989, 4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp, Smpd1, Apbb1, Hpxn, Trim3, Arfip2, Fxc1, Dnhd1, LOC100042811
Downstream geneLOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik, LOC626055, LOC100042856, LOC100042047, EG668108, EG668117, Gvin1, LOC672660, LOC100042097, LOC668128, LOC634394, EG209380, EG668139, Gm1966, LOC100042141, Olfr693, Olfr694
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-117J07.bB6Ng01-117J07.g
ACCDH922284DH922285
length1,2421,119
definitionDH922284|Mus musculus domesticus DNA, BAC clone: B6Ng01-117J07, 5' end.DH922285|Mus musculus domesticus DNA, BAC clone: B6Ng01-117J07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttaacatgaagagatgcaaaatattg
tcaaatgctttttcaacatctaatgaaatgatcatgtgggttttttttct
ttaagtttgtttatatagtggattaccatatattgaaccattcctgcatc
cctaggatgaagtctacttgatcgtggtgaatgatcattttgatgtgttc
ttggattcagttgtcaagaattttattgagtatttttgcattgatgttca
taagggagattggtctgaagttctatttctttgttctgtgtggtttaggt
ataagtataaatgtggcttcatagaacatattggataatgttcctctgtt
tctattttgtggaatagtttgaagagtattggtattaggtctccacaaaa
ctcatctggtcctgggcttttattggtttggagactattaatgactattt
ctatttctttagaggatatgggactgattagatcatttatgtaatcctgg
tttaactttggcacctagtatgtgtatgaaaaaattgtccatttcatcca
gattttccaattttttgagtatgagcttttgtagtaggatctgatatttt
tgaatttcctcagtttctgttgctatgtctcttttttcatttctgagttt
actaatttggatactgtctctgtgccctctggctaatggtttatctatat
tgttgattttctcaaagaaccagctcctggatttgttgattctttgtata
cttctttttgtttctattaggtttatttcagccctgagtttaattatttc
ctgctgtctactcctcttgggtatatttgcttctttttgttctagagctt
tcaggtgtgctgacaagctgctagtgtaagctctcttcagtttctttggg
aagcacttaaagttatgagtttccacttatcactgctttcattgtgtccc
ataagtttggtatgacgtgtcttatttcattaaatctaaaagtctttaac
tctttctttatttcttcttaccagtaatcatgagtaggtgtgtcagcttc
atgtgatgtgtgctccatgtttttgtggaattaagactgctattccatgg
gatctgataggggcatgggatattccagctctgatcgggaggccggttgg
aactctatgtacactggtagacatactgaatgccgaaggcatcttggtta
gagaaagctcgaatcgtagtactatggacaactactgcgagc
gaattctcatttcttttagagtcttcttctccttggtgaatctctttaat
tcctgctgcctctcctgttagagcccagggcccaaagtttcccatgatgc
agctcagactagattgacttttgtaacacagaaatctcaagtatctgccc
ttggatgcctttagtgtcgtgactcggtttggtatgtccccaagatcctt
ggatttcttatcctcttcagtggaactcatgacagccatctgtcctccac
ccccatctctactttgttttgtatctttcttccaaaagaaaagagaaaaa
agaaaaaacaaaagaaaaaaaaaaggaggggaggcaaatgtataagactg
tgccgaacaatgagaaaatgtagatgaatatggagataaagggacatata
cactatagcaaagaaacagaatcgtatttaaatggtgtgctacacatcaa
tgtcctgaatctttttagttagcctctgctgctagctgtttcccaaaacc
atctccttccctccatttctaatacttgcttcatttgctcatcagcttcc
ctatttccacttgactgttaccccaaatacagttcctttctggcccaaac
accaatcattttgcttttctataaagagccaatcacttttgaatgaataa
acctctcatgtcttgctaaaaatagagggcaggagctgttataccttcac
cagccaaatactccacttgagattatttgcacaaagtagtggattttgtt
ttttaatacaatggcttttgaaaaaacactttgttttagtttctgttgca
taagactttgaaaaaggctcaggactgactactgagaagtgaactagtgt
cccattctgaattaggtaatctcttcaattttcaagtaagctttcagcct
tgcatgtccgcatacctctttataccaatgtgagcaggctagctcccaat
gtatatgtttctatcatgtgctatgtaaattgtggcccatagagtctcag
atgcttgtgttctcttctatgctagtcatctatggtggccacatagactc
aagaccacagatgattctaaatggggactggggggtagtagaagttcaag
taattggagtccttccttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_112854208_112855337
seq2: B6Ng01-117J07.g_67_1185

seq1  GAATTCTCATTTCTTTTAGAGTCTTCTTCTCCTTGGTGAATCTCTTTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATTTCTTTTAGAGTCTTCTTCTCCTTGGTGAATCTCTTTAAT  50

seq1  TCCTGCTGCCTCTCCTGTTAGAGCCCAGGGCCCAAAGTTTCCCATGATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCTGCCTCTCCTGTTAGAGCCCAGGGCCCAAAGTTTCCCATGATGC  100

seq1  AGCTCAGACTAGATTGACTTTTGTAACACAGAAATCTCAAGTATCTGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAGACTAGATTGACTTTTGTAACACAGAAATCTCAAGTATCTGCCC  150

seq1  TTGGATGCCTTTAGTGTCGTGACTCGGTTTGGTATGTCCCCAAGATCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATGCCTTTAGTGTCGTGACTCGGTTTGGTATGTCCCCAAGATCCTT  200

seq1  GGATTTCTTATCCTCTTCAGTGGAACTCATGACAGCCATCTGTCCTCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCTTATCCTCTTCAGTGGAACTCATGACAGCCATCTGTCCTCCAC  250

seq1  CCCCATCTCTACTTTGTTTTGTATCTTTCTTCCAAAAGAAAAGAGAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATCTCTACTTTGTTTTGTATCTTTCTTCCAAAAGAAAAGAGAAAAA  300

seq1  AGAAAAAACAAAAGAAAAAAAAAAGGAGGGGAGGCAAATGTATAAGACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAACAAAAGAAAAAAAAAAGGAGGGGAGGCAAATGTATAAGACTG  350

seq1  TGCCGAACAATGAGAAAATGTAGATGAATATGGAGATAAAGGGACATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGAACAATGAGAAAATGTAGATGAATATGGAGATAAAGGGACATATA  400

seq1  CACTATAGCAAAGAAACAGAATCGTATTTAAATGGTGTGCTACACATCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATAGCAAAGAAACAGAATCGTATTTAAATGGTGTGCTACACATCAA  450

seq1  TGTCCTGAATCTTTTTAGTTAGCCTCTGCTGCTAGCTGTTTCCCAAAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGAATCTTTTTAGTTAGCCTCTGCTGCTAGCTGTTTCCCAAAACC  500

seq1  ATCTCCTTCCCTCCATTTCTAATACTTGCTTCATTTGCTCATCAGCTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTTCCCTCCATTTCTAATACTTGCTTCATTTGCTCATCAGCTTCC  550

seq1  CTATTTCCACTTGACTGTTACCCCAAATACAGTTCCTTTCTGGCCCAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCCACTTGACTGTTACCCCAAATACAGTTCCTTTCTGGCCCAAAC  600

seq1  ACCAATCATTTTGCTTTTCTATAAAGAGCCAATCACTTTTGAATGAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATCATTTTGCTTTTCTATAAAGAGCCAATCACTTTTGAATGAATAA  650

seq1  ACCTCTCATGTCTTGCTAAAAATAGAGGGCAGGAGCTGTTATACCTTCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTCATGTCTTGCTAAAAATAGAGGGCAGGAGCTGTTATACCTTCAC  700

seq1  CAGCCAAATACTCCACTTGAGATTATTTGCACAAAGTAGTGGATTTTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAAATACTCCACTTGAGATTATTTGCACAAAGTAGTGGATTTTGTT  750

seq1  TTTTAATACAATGGCTTTTGAAAAAACACTTTGTTTTAGTTTCTGTTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATACAATGGCTTTTGAAAAAACACTTTGTTTTAGTTTCTGTTGCA  800

seq1  TAAGACTTTGAAAAAGGCTCAGGACTGACTACTGAGAAGTGAACTAGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACTTTGAAAAAGGCTCAGGACTGACTACTGAGAAGTGAACTAGTGT  850

seq1  CCCATTCTGAATTAGGTAATCTCTTCAATTTTCAAGTAAGCTTTCAGGCC  900
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CCCATTCTGAATTAGGTAATCTCTTCAATTTTCAAGTAAGCTTTCA-GCC  899

seq1  TTGCATGTCCGCATACCTCTTTATACCAATGTGAGCAGGGCTAGCTCCCA  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTGCATGTCCGCATACCTCTTTATACCAATGTGAGCA-GGCTAGCTCCCA  948

seq1  ATGTTATATGTTTTCTATCATGTGCTATGTAAATTGTGGCCCATAGAGTT  1000
      ||| |||||| ||||||||||||||||||||||||||||||||||||| |
seq2  ATG-TATATG-TTTCTATCATGTGCTATGTAAATTGTGGCCCATAGAG-T  995

seq1  CTCAAGATGCTTGTGTTCTCTTCCTATGCTAGTCATCCTATGGTGGCCAC  1050
      ||| |||||||||||||||||| ||||||||||||| |||||||||||||
seq2  CTC-AGATGCTTGTGTTCTCTT-CTATGCTAGTCAT-CTATGGTGGCCAC  1042

seq1  ATTAGACCTCAAGA-CACAGATGAATTCTAAAATGGGGACT-GGGGGTAG  1098
      | |||| ||||||| |||||||| ||||| ||||||||||| ||||||||
seq2  A-TAGA-CTCAAGACCACAGATG-ATTCT-AAATGGGGACTGGGGGGTAG  1088

seq1  TAGAAAGTTCAAAGTAAATAGGAGTCC--CCTTT  1130
      ||| |||||| |||| ||| |||||||  |||||
seq2  TAG-AAGTTC-AAGT-AATTGGAGTCCTTCCTTT  1119