BAC Information

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BAC

Clone NameB6Ng01-118B11
Chromosome7 (Build37)
Map Location 11,655,516 - 11,656,644
singlet/doubletsinglet
Overlap genenone
Upstream geneEG628152, LOC100042921, Vmn2r52, LOC665663, V1re11, LOC628521, LOC628525, LOC100042206, Nlrp4d, LOC100042214, V1re10, Zik1, EG628580, V1re9, V1rl1, EG628596, Nlrp4b, LOC333184, V1re13, BQ559217, LOC637237, LOC236479, EG665879, Zscan4b, LOC665793, EG665798, Gm397, Zscan4-ps1
Downstream geneLOC635187, LOC100042997, LOC100042293, Zscan4d, LOC628737, LOC676750, LOC672893, LOC546931, LOC675762, Zscan4e, LOC665857, LOC665861, Zscan4f, LOC673742, LOC665887, LOC637541, LOC100042361, Zscan4-ps2, LOC675782, LOC100042386, LOC665926, LOC637571, LOC100043042, LOC628853, V1rg1, V1rg2, EG628898, V1rg5, V1rg6, LOC665999, V1rg4, LOC100042423, LOC628946
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118B11.b
ACCDH922663
length1,115
definitionDH922663|Mus musculus domesticus DNA, BAC clone: B6Ng01-118B11, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagattggcatttatcttctatgacctctgatcctgtgttctc
acatagtagtcaatgaaaacttgttaaaatttcctgtttccagagagatt
ggatcctaaatgcttcagtgaactctgtagaatccttgccagtgggatca
gatagggcaggaaaaatccagaaggtgtctgtagcacaatatagtaaaga
tgtaggctgaagggaacttatatcttttggtagagaggaatgtgcattgc
ctattgggaaaacatggacatcatatgaggactgtattctagggagagac
taaaatttgtggcaaaatgtggtggcctttgttgttctctctcgttttct
ctatctttccatctctctctctcaaatttggtttgtttgtttctttgtta
ttttgtttgtttttttttacaaatgtctatatggtatcctagtctgctca
caatctcactaagttgttcagaatggtcttgcactacaatcatataactt
ttaactcctcagtgctgacatcccagagtgacctcactacttcacacatc
ctttttgtttttctgtctctgttttcttttatttcatcttgagacaattt
attcccatgtatgcctagatataatagccctactgtgtggatcaggttga
cctgaaattgacacatccttgccattaattccagagtggtcgagttaaag
gtggttgcctttgtgaattgctttgtccaatcatgctaattgataggttc
aattgagacccctaaattcacatgttgatgttttatcttcaaacactgag
attgtactgaacttcagtctaaaacatagaaccttaatttcccttacccc
aaatacgctggaaaatcagtgatttacaacttctaaaatctgaagtcttt
tacattcacaaaaccaataattttgaatgcttaaacctaaagctgccctt
ctcttatggaaaaaaaatgtcacatgacaagaaagcactacaaattctca
ataattagccatttgtacacatgatgactcaccatgtaaaaatatacatt
tgtttagtggctattgatgatgttcagtaatcatggataatgccatacta
acaagaagagaacat
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_11655516_11656644
seq2: B6Ng01-118B11.b_49_1163

seq1  GAATTCCAAGATTGGCATTTATCTTCTATGACCTCTGATCCTGTGTTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGATTGGCATTTATCTTCTATGACCTCTGATCCTGTGTTCTC  50

seq1  ACATAGTAGTCAATGAAAACTTGTTAAAATTTCCTGTTTCCAGAGAGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGTAGTCAATGAAAACTTGTTAAAATTTCCTGTTTCCAGAGAGATT  100

seq1  GGATCCTAAATGCTTCAGTGAACTCTGTAGAATCCTTGCCAGTGGGATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCTAAATGCTTCAGTGAACTCTGTAGAATCCTTGCCAGTGGGATCA  150

seq1  GATAGGGCAGGAAAAATCCAGAAGGTGTCTGTAGCACAATATAGTAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGGCAGGAAAAATCCAGAAGGTGTCTGTAGCACAATATAGTAAAGA  200

seq1  TGTAGGCTGAAGGGAACTTATATCTTTTGGTAGAGAGGAATGTGCATTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGCTGAAGGGAACTTATATCTTTTGGTAGAGAGGAATGTGCATTGC  250

seq1  CTATTGGGAAAACATGGACATCATATGAGGACTGTATTCTAGGGAGAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGGGAAAACATGGACATCATATGAGGACTGTATTCTAGGGAGAGAC  300

seq1  TAAAATTTGTGGCAAAATGTGGTGGCCTTTGTTGTTCTCTCTCGTTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTTGTGGCAAAATGTGGTGGCCTTTGTTGTTCTCTCTCGTTTTCT  350

seq1  CTATCTTTCCATCTCTCTCTCTCAAATTTGGTTTGTTTGTTTCTTTGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTTTCCATCTCTCTCTCTCAAATTTGGTTTGTTTGTTTCTTTGTTA  400

seq1  TTTTGTTTGTTTTTTTTTACAAATGTCTATATGGTATCCTAGTCTGCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTGTTTTTTTTTACAAATGTCTATATGGTATCCTAGTCTGCTCA  450

seq1  CAATCTCACTAAGTTGTTCAGAATGGTCTTGCACTACAATCATATAACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTCACTAAGTTGTTCAGAATGGTCTTGCACTACAATCATATAACTT  500

seq1  TTAACTCCTCAGTGCTGACATCCCAGAGTGACCTCACTACTTCACACATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTCCTCAGTGCTGACATCCCAGAGTGACCTCACTACTTCACACATC  550

seq1  CTTTTTGTTTTTCTGTCTCTGTTTTCTTTTATTTCATCTTGAGACAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGTTTTTCTGTCTCTGTTTTCTTTTATTTCATCTTGAGACAATTT  600

seq1  ATTCCCATGTATGCCTAGATATAATAGCCCTACTGTGTGGATCAGGTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCATGTATGCCTAGATATAATAGCCCTACTGTGTGGATCAGGTTGA  650

seq1  CCTGAAATTGACACATCCTTGCCATTAATTCCAGAGTGGTCGAGTTAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAATTGACACATCCTTGCCATTAATTCCAGAGTGGTCGAGTTAAAG  700

seq1  GTGGTTGCCTTTGTGAATTGCTTTGTCCAATCATGCTAATTGATAGGTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTGCCTTTGTGAATTGCTTTGTCCAATCATGCTAATTGATAGGTTC  750

seq1  AATTGAGACCCCTAAATTCACATGTTGATGTTTTATCTTCAAACACTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAGACCCCTAAATTCACATGTTGATGTTTTATCTTCAAACACTGAG  800

seq1  ATTGTACTGAACTTCAGTCTAAAACATAGAACCTTAATTTCCCTTACCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTACTGAACTTCAGTCTAAAACATAGAACCTTAATTTCCCTTACCCC  850

seq1  AAATACGCTGGAAAATCAGTGATTTACAACTTCTAAAATCTGAAGTCTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACGCTGGAAAATCAGTGATTTACAACTTCTAAAATCTGAAGTCTTT  900

seq1  TACATTCACAAAACCAATAATTTTGAATGCTTAAACCTAAAGCTGCCCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTCACAAAACCAATAATTTTGAATGCTTAAACCTAAAGCTGCCCTT  950

seq1  CTCTTTATGGAAAAAAAAATGTCACATGACAAAGAAAGCACTACAAATTC  1000
      ||| |||||| ||||||||||||||||||| |||||||||||||||||||
seq2  CTC-TTATGG-AAAAAAAATGTCACATGAC-AAGAAAGCACTACAAATTC  997

seq1  TTCAAATAAATTAGCCATTTGTTACAACAATGATTGACTCACCATGTAAA  1050
       ||||   ||||||||||||| ||||   |||| ||||||||||||||||
seq2  -TCAA--TAATTAGCCATTTG-TACA--CATGA-TGACTCACCATGTAAA  1040

seq1  AATATACAATTTGTTTTAGTTGCTATTGATGATGTTCAGTATATCAATGA  1100
      ||||||| ||||| |||||| |||||||||||||||||||| ||||  ||
seq2  AATATAC-ATTTG-TTTAGTGGCTATTGATGATGTTCAGTA-ATCATGGA  1087

seq1  ATTAATGCAATACTAACAAGAAGA-AACAT  1129
        |||||| ||||||||||||||| |||||
seq2  --TAATGCCATACTAACAAGAAGAGAACAT  1115