BAC Information

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BAC

Clone NameB6Ng01-118D19
Chromosome7 (Build37)
Map Location 78,694,998 - 78,837,459
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC665535, Mctp2, LOC100042873, LOC100042880, LOC233391
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118D19.bB6Ng01-118D19.g
ACCDH922770DH922771
length2041,126
definitionDH922770|Mus musculus domesticus DNA, BAC clone: B6Ng01-118D19, 5' end.DH922771|Mus musculus domesticus DNA, BAC clone: B6Ng01-118D19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(78,694,998 - 78,695,201)(78,836,313 - 78,837,459)
sequence
atggtattaaatccaaacaagacatgccatgcatgaaaacctatcactgg
ctgttactgtcattttgaaaagaaagaaagaagttcttttccaggtattc
tctgttttactttgatgccatttgaagagtagctctctgctgacgtaaaa
gaggagggaaaggggagcagggaatatgaagatggagatgaggggtgggg
gtgg
gaattcataggaagtgaaaagaacttcagaagtctctccaaagattctgg
tgtaccaagagtaaccccagagttttctgagacagtgagcagggtgctca
ctggggccaaggtaaaaactgcagtattgacaaagcagtataggcacttg
taccaccacttaagtgagcctctgtatgattctccctggaggaaagagat
gtttccatgcaacaagcttagcagtgttatcacaactggagcttcacacc
ttttaaatgcagattggtcatgcaaatcattgctgcagaatattacaagg
caaatatacaattgaggatggaaatagaatgaaagataatcacattagta
agctgtgctgcatcagtgtgacggtaattaggatccttataataaaaatt
aaaatttgaaatatgcattgtgctgcttttcttagttcagattaatatgg
tgaagtttgtatactttgagctagatgggcatgcagtgttatgctattgt
tcataataactgatattgtttagttgtaaattcagttatgtgaactaata
gtagtatctgattatttatactcacttctacttgttttacttggttttga
tagaaagtaacagtaatgaagaatatgtatttgaacttttgatgaatcac
ttgacatggattatagtgtataaagaatgctaggtaagatgaggtccttc
agatgataacctgtcatgtgagatgcaaggacaaccacagactctgcatt
ggaaaattttaggtgttttctgtccaacatcagagcaaggctcatttgca
agcttattgggtttattagttttcattccctgtttctctgttacagttgg
tttatcatccttagcacactcttcatcttactcaactaataataatcagg
tccttttactaagttgatggctagttttcccaggcattgcatgtatgtca
tatttttggcctgtgtagtacttccattaaatcagattatacataataga
tgaagtaagcttcatagaaaatatgtttgttattgagcagtaaaatcagt
cgactggttgtttctttgtggtatggatctcaacctttgatgctttctta
cttcgatctcatgagagtccatcatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_78694998_78695201
seq2: B6Ng01-118D19.b_53_256

seq1  ATGGTATTAAATCCAAACAAGACATGCCATGCATGAAAACCTATCACTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTATTAAATCCAAACAAGACATGCCATGCATGAAAACCTATCACTGG  50

seq1  CTGTTACTGTCATTTTGAAAAGAAAGAAAGAAGTTCTTTTCCAGGTATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTACTGTCATTTTGAAAAGAAAGAAAGAAGTTCTTTTCCAGGTATTC  100

seq1  TCTGTTTTACTTTGATGCCATTTGAAGAGTAGCTCTCTGCTGACGTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTTACTTTGATGCCATTTGAAGAGTAGCTCTCTGCTGACGTAAAA  150

seq1  GAGGAGGGAAAGGGGAGCAGGGAATATGAAGATGGAGATGAGGGGTGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGGAAAGGGGAGCAGGGAATATGAAGATGGAGATGAGGGGTGGGG  200

seq1  GTGG  204
      ||||
seq2  GTGG  204

seq1: chr7_78836313_78837459
seq2: B6Ng01-118D19.g_67_1192 (reverse)

seq1  CATGATTGGTGACTCTCATTGAGGATCTGATATGGTAGGAAAGCATCAAA  50
      ||||||    |||||||| ||| ||||  |    ||| ||||||||| ||
seq2  CATGAT---GGACTCTCA-TGA-GATCGAA----GTAAGAAAGCATC-AA  40

seq1  AGTTTGAGATCAATAACACAAAGAAACATACCAAGTCGACTGATTTTTAC  100
      || |||||||| ||| |||||||||||| ||| |||||||||| ||||||
seq2  AGGTTGAGATCCATACCACAAAGAAACA-ACC-AGTCGACTGA-TTTTAC  87

seq1  TGGCTTCATAACAAACATATTTTCTATGAAGCTTACTTCATTCTATTTAA  150
      | |||  ||||||||||||||||||||||||||||||||| ||||||   
seq2  T-GCTCAATAACAAACATATTTTCTATGAAGCTTACTTCA-TCTATT---  132

seq1  TTGTATAATTCTGATTTAATGGAAGTAACTACACAGGCCAAAAAATATGA  200
       ||||||| ||||||||||||||||| |||||||||||| ||||||||||
seq2  ATGTATAA-TCTGATTTAATGGAAGT-ACTACACAGGCC-AAAAATATGA  179

seq1  CATACATGCAATGCCTGGGAAAACTAGCCATCAACTTAGTAAAAGGACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATGCAATGCCTGGGAAAACTAGCCATCAACTTAGTAAAAGGACCT  229

seq1  GATTATTATTAGTTGAGTAAGATGAAGAGTGTGCTAAGGATGATAAACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTATTAGTTGAGTAAGATGAAGAGTGTGCTAAGGATGATAAACCA  279

seq1  ACTGTAACAGAGAAACAGGGAATGAAAACTAATAAACCCAATAAGCTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAACAGAGAAACAGGGAATGAAAACTAATAAACCCAATAAGCTTGC  329

seq1  AAATGAGCCTTGCTCTGATGTTGGACAGAAAACACCTAAAATTTTCCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGCCTTGCTCTGATGTTGGACAGAAAACACCTAAAATTTTCCAAT  379

seq1  GCAGAGTCTGTGGTTGTCCTTGCATCTCACATGACAGGTTATCATCTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGTCTGTGGTTGTCCTTGCATCTCACATGACAGGTTATCATCTGAA  429

seq1  GGACCTCATCTTACCTAGCATTCTTTATACACTATAATCCATGTCAAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTCATCTTACCTAGCATTCTTTATACACTATAATCCATGTCAAGTG  479

seq1  ATTCATCAAAAGTTCAAATACATATTCTTCATTACTGTTACTTTCTATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCAAAAGTTCAAATACATATTCTTCATTACTGTTACTTTCTATCA  529

seq1  AAACCAAGTAAAACAAGTAGAAGTGAGTATAAATAATCAGATACTACTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAGTAAAACAAGTAGAAGTGAGTATAAATAATCAGATACTACTAT  579

seq1  TAGTTCACATAACTGAATTTACAACTAAACAATATCAGTTATTATGAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCACATAACTGAATTTACAACTAAACAATATCAGTTATTATGAACA  629

seq1  ATAGCATAACACTGCATGCCCATCTAGCTCAAAGTATACAAACTTCACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATAACACTGCATGCCCATCTAGCTCAAAGTATACAAACTTCACCA  679

seq1  TATTAATCTGAACTAAGAAAAGCAGCACAATGCATATTTCAAATTTTAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATCTGAACTAAGAAAAGCAGCACAATGCATATTTCAAATTTTAAT  729

seq1  TTTTATTATAAGGATCCTAATTACCGTCACACTGATGCAGCACAGCTTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTATAAGGATCCTAATTACCGTCACACTGATGCAGCACAGCTTAC  779

seq1  TAATGTGATTATCTTTCATTCTATTTCCATCCTCAATTGTATATTTGCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTGATTATCTTTCATTCTATTTCCATCCTCAATTGTATATTTGCCT  829

seq1  TGTAATATTCTGCAGCAATGATTTGCATGACCAATCTGCATTTAAAAGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATATTCTGCAGCAATGATTTGCATGACCAATCTGCATTTAAAAGGT  879

seq1  GTGAAGCTCCAGTTGTGATAACACTGCTAAGCTTGTTGCATGGAAACATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGCTCCAGTTGTGATAACACTGCTAAGCTTGTTGCATGGAAACATC  929

seq1  TCTTTCCTCCAGGGAGAATCATACAGAGGCTCACTTAAGTGGTGGTACAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTCCAGGGAGAATCATACAGAGGCTCACTTAAGTGGTGGTACAA  979

seq1  GTGCCTATACTGCTTTGTCAATACTGCAGTTTTTACCTTGGCCCCAGTGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTATACTGCTTTGTCAATACTGCAGTTTTTACCTTGGCCCCAGTGA  1029

seq1  GCACCCTGCTCACTGTCTCAGAAAACTCTGGGGTTACTCTTGGTACACCA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCCTGCTCACTGTCTCAGAAAACTCTGGGGTTACTCTTGGTACACCA  1079

seq1  GAATCTTTGGAGAGACTTCTGAAGTTCTTTTCACTTCCTATGAATTC  1147
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTTGGAGAGACTTCTGAAGTTCTTTTCACTTCCTATGAATTC  1126