BAC Information

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BAC

Clone NameB6Ng01-118I22
Chromosome7 (Build37)
Map Location 116,123,171 - 116,225,321
singlet/doubletdoublet
Overlap geneTub, Ric3
Upstream geneOlfr477, LOC626732, Olfr478, Olfr479, Olfr480, Olfr481, LOC100043059, Olfr482, Olfr483, Olfr484, Olfr485, Olfr486, Olfr487, Olfr1538-ps1, Olfr488, LOC546990, Olfr489-ps1, Olfr490, LOC626881, Olfr491, Olfr492, Olfr493, Olfr494, Olfr495, Olfr496-ps1, Olfr497, Olfr498, Olfr499-ps1, Olfr500-ps1, Olfr501-ps1, Olfr502, LOC269980, Olfr503, Olfr504, Olfr505-ps1, Olfr506, Olfr507, Olfr508, Olfr509, Olfr510, Olfr511-ps1, Olfr512, Olfr513, Olfr514, Olfr515-ps1, Olfr516, Olfr517, Olfr518, Olfr519, Nlrp10, Eif3s5, BC049265
Downstream geneLmo1, Stk33, EG668320, 1700095J03Rik, Trim66, Rpl27a, St5, LOC100042582, D930014E17Rik, BC051019, Ascl3, Tmem9b, 4930431P19Rik, Nrip3, Scube2, Phxr5, Rab6ip1, Tmem41b, Ipo7, AA474408, Zfp143
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118I22.bB6Ng01-118I22.g
ACCDH923003DH923004
length1,1541,143
definitionDH923003|Mus musculus domesticus DNA, BAC clone: B6Ng01-118I22, 5' end.DH923004|Mus musculus domesticus DNA, BAC clone: B6Ng01-118I22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(116,224,154 - 116,225,321)(116,123,171 - 116,124,317)
sequence
gaattccaaagagcaggagtcaaatccctgcctagaagaactcctggctt
agtagaggaaaacagataagctaccaggtgagtaccaaagtggtagttac
tggtattcattctggtctacactgggaacattgaagatgtacatatgcaa
cagtctgttattacaactcaacaaagcttttatagaggagtttttctcct
ctcccccaaatctaacacatggaacatgtaatttgtctatttaagtacac
aagtcactttttttttgcatatctacagttgtatagccattagcccaata
agttttagaacatttcatcatctcccaaaggcagtctgagcctttaagtt
gtcaccactctcctcatttcttcatctttagtgagggcaaccagtcatcg
ttttctgtgtctgtaggatcacctatgtactttctgactgactttaagct
agcataaagtcccaaggtttatttctcttctagcttgtacttcatccctt
tcagtggctgaacactagctcctgttcataggtctcatttttctgatctc
tttgttagttgatggacatctgggttgttttgcctttcagcatgtcggga
taatgctgccattcatttaaagatttctgtgtggtatgtttgtgattgga
actaagcattatttcctggtcatatagttacatttcactttttgagaaac
tgccagatagataacaaagcaacctttttactttacaggcctaccaggag
tatgcgaaagttttggtttctctacattttaccaattggagtgacaagat
tgaaatgactgactgtgtccatcttgggtcatattgattgcccttgagta
agcctagtgagcttcctggcgtagcttgtagagaaaacctttagagtgcg
ggactgtctgagcagtctgttgcgtatgcgaatgtgcctgccatttctgg
cattagcttgagacagcatggggtgttcctgaatttggaggaaacattat
gtcctaatagaagggaaacaaatgcccatcagtggatatacagagacaag
tgtggagcagagactgagaaagcatcagagactgcccaactggggatcta
tccatattaagtcacgactcagaccctattgtgatgcaagaattgttttg
ctga
gaattcagtaatctttcctttggagtatgtcaacaccagcagcacatttt
aggtaccaagtgtagctgccattcctcctgtcatgtttcccccttacttt
ccttgcatgaagtaaatttgcagaaatgtttttatcatcttccctggact
ggacacctgtctcaccagtgtgcttctactgtgttgtgtttaccctcaac
acaaatgtcaaatgaatatgggtttgttttttgttttgtttttaagttta
ttttttgcttgtttgttggttagattttttttttcaaatctgtttgtttt
tctacaccaaccactttgacaactatctgaatgtcaatcatgtcttgcag
ttcagttctgctgttatctggagttagtttgttccccacaggttaagacc
tcagtcccacaaggccactcctatctcacaggctaataagtctccagttg
cctactgaactgctagccaatcggctataatttgggcactcccataatcc
tctggtaatttgccagaacagatggtagaacctaggaaaggtgctttttt
gactattaaccgtttactataaaggtcaaaacttgggaacagacaaatga
aagagacacacaggacaaggagtgtagatgacctctgtgccttctctagc
gccccttcctctgagatattcaccctattgtttagggttttgtggaggtt
ctgttacatggctgatcaattaggcctttggagactggtggctgagttct
agctcccttcctctcccttgatctggctttgagacggaaagctctagcct
ccagtcacgtgattggcatagggttcagcattttggagatgactctatat
actacttgctcctgacatgcctcattcctctctatcttgcctttccacaa
gtcttcctagcccatggcttcctacatacagcctacctgtttcacctgtg
aacttgttctttgtcatcaggcttgccgacaccttctccagaaatcttcc
attgcagtgctaactctgttgtagttcttagttgtatactactactgtca
taccgctgggtctactactagctgtgccttctctgagaccaggaaaatat
tttgcttcactcttatatcctctagtgaagggccatggcactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_116224154_116225321
seq2: B6Ng01-118I22.b_45_1198 (reverse)

seq1  TCAGC-AAACACTTCTTGGCATCCACAATAGTGTCTGAGTTTGGTGACTG  49
      ||||| ||||| ||||| |||| |||||||| |||||||  | |||||| 
seq2  TCAGCAAAACAATTCTT-GCAT-CACAATAGGGTCTGAG--TCGTGACTT  46

seq1  TATATGGGATAGATCCCCAGGTTGGGCAGTCTCTGGATGGCCTTTCCTTC  99
       |||| ||||||||||||| |||||||||||||| ||||  |||||  ||
seq2  AATAT-GGATAGATCCCCA-GTTGGGCAGTCTCT-GATG--CTTTC--TC  89

seq1  AGTCTCTGCTCCACACTTTGTCTCTGTATATCCACTGGTGGGCATTTTGT  149
      |||||||||||||||| |||||||||||||||||||| |||||| |||||
seq2  AGTCTCTGCTCCACAC-TTGTCTCTGTATATCCACTGATGGGCA-TTTGT  137

seq1  TTCCCCTTCTATTAGGACATAATGTTTCCTCCAAATTCAGGAACACCCCA  199
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TT-CCCTTCTATTAGGACATAATGTTTCCTCCAAATTCAGGAACACCCCA  186

seq1  TGCTTGTCTCAAGCTAATGCCAGAAATGGCAGGCACATTCGCATACGCAA  249
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGC-TGTCTCAAGCTAATGCCAGAAATGGCAGGCACATTCGCATACGCAA  235

seq1  CAGACTGCTCAGACAGTCCCGCACTCTAAAGGTTTTCTCTACAAGCTACG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTGCTCAGACAGTCCCGCACTCTAAAGGTTTTCTCTACAAGCTACG  285

seq1  CCAGGAAGCTCACTAGGCTTACTCAAGGGCAATCAATATGACCCAAGATG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAAGCTCACTAGGCTTACTCAAGGGCAATCAATATGACCCAAGATG  335

seq1  GACACAGTCAGTCATTTCAATCTTGTCACTCCAATTGGTAAAATGTAGAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAGTCAGTCATTTCAATCTTGTCACTCCAATTGGTAAAATGTAGAG  385

seq1  AAACCAAAACTTTCGCATACTCCTGGTAGGCCTGTAAAGTAAAAAGGTTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAAACTTTCGCATACTCCTGGTAGGCCTGTAAAGTAAAAAGGTTG  435

seq1  CTTTGTTATCTATCTGGCAGTTTCTCAAAAAGTGAAATGTAACTATATGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTATCTATCTGGCAGTTTCTCAAAAAGTGAAATGTAACTATATGA  485

seq1  CCAGGAAATAATGCTTAGTTCCAATCACAAACATACCACACAGAAATCTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAAATAATGCTTAGTTCCAATCACAAACATACCACACAGAAATCTT  535

seq1  TAAATGAATGGCAGCATTATCCCGACATGCTGAAAGGCAAAACAACCCAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAATGGCAGCATTATCCCGACATGCTGAAAGGCAAAACAACCCAG  585

seq1  ATGTCCATCAACTAACAAAGAGATCAGAAAAATGAGACCTATGAACAGGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCATCAACTAACAAAGAGATCAGAAAAATGAGACCTATGAACAGGA  635

seq1  GCTAGTGTTCAGCCACTGAAAGGGATGAAGTACAAGCTAGAAGAGAAATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTGTTCAGCCACTGAAAGGGATGAAGTACAAGCTAGAAGAGAAATA  685

seq1  AACCTTGGGACTTTATGCTAGCTTAAAGTCAGTCAGAAAGTACATAGGTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTGGGACTTTATGCTAGCTTAAAGTCAGTCAGAAAGTACATAGGTG  735

seq1  ATCCTACAGACACAGAAAACGATGACTGGTTGCCCTCACTAAAGATGAAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTACAGACACAGAAAACGATGACTGGTTGCCCTCACTAAAGATGAAG  785

seq1  AAATGAGGAGAGTGGTGACAACTTAAAGGCTCAGACTGCCTTTGGGAGAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGGAGAGTGGTGACAACTTAAAGGCTCAGACTGCCTTTGGGAGAT  835

seq1  GATGAAATGTTCTAAAACTTATTGGGCTAATGGCTATACAACTGTAGATA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAATGTTCTAAAACTTATTGGGCTAATGGCTATACAACTGTAGATA  885

seq1  TGCAAAAAAAAAGTGACTTGTGTACTTAAATAGACAAATTACATGTTCCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAAAAAAAGTGACTTGTGTACTTAAATAGACAAATTACATGTTCCA  935

seq1  TGTGTTAGATTTGGGGGAGAGGAGAAAAACTCCTCTATAAAAGCTTTGTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTAGATTTGGGGGAGAGGAGAAAAACTCCTCTATAAAAGCTTTGTT  985

seq1  GAGTTGTAATAACAGACTGTTGCATATGTACATCTTCAATGTTCCCAGTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGTAATAACAGACTGTTGCATATGTACATCTTCAATGTTCCCAGTG  1035

seq1  TAGACCAGAATGAATACCAGTAACTACCACTTTGGTACTCACCTGGTAGC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCAGAATGAATACCAGTAACTACCACTTTGGTACTCACCTGGTAGC  1085

seq1  TTATCTGTTTTCCTCTACTAAGCCAGGAGTTCTTCTAGGCAGGGATTTGA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGTTTTCCTCTACTAAGCCAGGAGTTCTTCTAGGCAGGGATTTGA  1135

seq1  CTCCTGCTCTTTGGAATTC  1168
      |||||||||||||||||||
seq2  CTCCTGCTCTTTGGAATTC  1154

seq1: chr7_116123171_116124317
seq2: B6Ng01-118I22.g_67_1209

seq1  GAATTCAGTAATCTTTCCTTTGGAGTATGTCAACACCAGCAGCACATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAATCTTTCCTTTGGAGTATGTCAACACCAGCAGCACATTTT  50

seq1  AGGTACCAAGTGTAGCTGCCATTCCTCCTGTCATGTTTCCCCCTTACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACCAAGTGTAGCTGCCATTCCTCCTGTCATGTTTCCCCCTTACTTT  100

seq1  CCTTGCATGAAGTAAATTTGCAGAAATGTTTTTATCATCTTCCCTGGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCATGAAGTAAATTTGCAGAAATGTTTTTATCATCTTCCCTGGACT  150

seq1  GGACACCTGTCTCACCAGTGTGCTTCTACTGTGTTGTGTTTACCCTCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACCTGTCTCACCAGTGTGCTTCTACTGTGTTGTGTTTACCCTCAAC  200

seq1  ACAAATGTCAAATGAATATGGGTTTGTTTTTTGTTTTGTTTTTAAGTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGTCAAATGAATATGGGTTTGTTTTTTGTTTTGTTTTTAAGTTTA  250

seq1  TTTTTTGCTTGTTTGTTGGTTAGATTTTTTTTTTCAAATCTGTTTGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGCTTGTTTGTTGGTTAGATTTTTTTTTTCAAATCTGTTTGTTTT  300

seq1  TCTACACCAACCACTTTGACAACTATCTGAATGTCAATCATGTCTTGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACACCAACCACTTTGACAACTATCTGAATGTCAATCATGTCTTGCAG  350

seq1  TTCAGTTCTGCTGTTATCTGGAGTTAGTTTGTTCCCCACAGGTTAAGACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTCTGCTGTTATCTGGAGTTAGTTTGTTCCCCACAGGTTAAGACC  400

seq1  TCAGTCCCACAAGGCCACTCCTATCTCACAGGCTAATAAGTCTCCAGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCCCACAAGGCCACTCCTATCTCACAGGCTAATAAGTCTCCAGTTG  450

seq1  CCTACTGAACTGCTAGCCAATCGGCTATAATTTGGGCACTCCCATAATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTGAACTGCTAGCCAATCGGCTATAATTTGGGCACTCCCATAATCC  500

seq1  TCTGGTAATTTGCCAGAACAGATGGTAGAACCTAGGAAAGGTGCTTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTAATTTGCCAGAACAGATGGTAGAACCTAGGAAAGGTGCTTTTTT  550

seq1  GACTATTAACCGTTTACTATAAAGGTCAAAACTTGGGAACAGACAAATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATTAACCGTTTACTATAAAGGTCAAAACTTGGGAACAGACAAATGA  600

seq1  AAGAGACACACAGGACAAGGAGTGTAGATGACCTCTGTGCCTTCTCTAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACACACAGGACAAGGAGTGTAGATGACCTCTGTGCCTTCTCTAGC  650

seq1  GCCCCTTCCTCTGAGATATTCACCCTATTGTTTAGGGTTTTGTGGAGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTTCCTCTGAGATATTCACCCTATTGTTTAGGGTTTTGTGGAGGTT  700

seq1  CTGTTACATGGCTGATCAATTAGGCCTTTGGAGACTGGTGGCTGAGTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTACATGGCTGATCAATTAGGCCTTTGGAGACTGGTGGCTGAGTTCT  750

seq1  AGCTCCCTTCCTCTCCCTTGATCTGGCTTTGAGACGGAAAGCTCTAAGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGCTCCCTTCCTCTCCCTTGATCTGGCTTTGAGACGGAAAGCTCT-AGCC  799

seq1  TCCAGTCACGTGATTGGCATAGGGTTCAGCATTTTGGAGATGACTCTATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTCACGTGATTGGCATAGGGTTCAGCATTTTGGAGATGACTCTATA  849

seq1  TACTACTTGCTCCTGACATGCCTCA-TCCTCTCCTATCTTGCCTTTCCAC  899
      ||||||||||||||||||||||||| |||||| |||||||||||||||||
seq2  TACTACTTGCTCCTGACATGCCTCATTCCTCT-CTATCTTGCCTTTCCAC  898

seq1  AGGTCTCCCTAGCCCATGGC-TCCTACATACAGCCTACCTGTTTCACCTG  948
      | |||| ||||||||||||| |||||||||||||||||||||||||||||
seq2  AAGTCTTCCTAGCCCATGGCTTCCTACATACAGCCTACCTGTTTCACCTG  948

seq1  TGAAC-TGTTCTTTGTCCATCAGGGCTTGCCGACACCTTCTCCAAGAAAA  997
      ||||| |||||||||| ||||| |||||||||||||||||||| ||||| 
seq2  TGAACTTGTTCTTTGT-CATCA-GGCTTGCCGACACCTTCTCC-AGAAAT  995

seq1  CTTCCATTGCAGTGCTAAACTCTGTTGTAGTTCTTAGTATGTATACTACT  1047
      |||||||||||||||| ||||||||||||||||||||| |||||||||||
seq2  CTTCCATTGCAGTGCT-AACTCTGTTGTAGTTCTTAGT-TGTATACTACT  1043

seq1  ACTGTCAATTACGCCTGGGTCTACTACTAAGCTGTGCCCTCTCTGAGACC  1097
      |||||||  |||  |||||||||||||| ||||||||| |||||||||||
seq2  ACTGTCA--TACCGCTGGGTCTACTACT-AGCTGTGCCTTCTCTGAGACC  1090

seq1  AGGAAAATATCTTGCTTCACTC-TATA-CCTCTAGTAGAGGGCCAT-GCA  1144
      |||||||||| ||||||||||| |||| ||||||||  |||||||| |||
seq2  AGGAAAATATTTTGCTTCACTCTTATATCCTCTAGTGAAGGGCCATGGCA  1140

seq1  CTG  1147
      |||
seq2  CTG  1143