BAC Information

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BAC

Clone NameB6Ng01-118M22
Chromosome7 (Build37)
Map Location 59,912,787 - 59,913,990
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc17a6, EG620599, LOC654473, LOC100040608, Gas2, 1700015G11Rik, EG668783
Downstream geneEG620782, LOC100040692, Gm1865, LOC100040718
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118M22.bB6Ng01-118M22.g
ACCDH923191DH923192
length1,2301,163
definitionDH923191|Mus musculus domesticus DNA, BAC clone: B6Ng01-118M22, 5' end.DH923192|Mus musculus domesticus DNA, BAC clone: B6Ng01-118M22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacagtggttgtacaagtttgcaatcccaccaacaatggaggag
tgttcctctttctccacatcctagccagcatctgttgtcacctgaatttt
tggtcttagccattctgactattgtgaggtggaatctcagggttgttttg
atttgtattttcctgatgattaaggatgctgaacattttttcaggtgctt
ttcagtcaatcggtattcatcaggtgagaattcttcgtttagctctgcgc
cccattttttaatggtgttatttgattttctggagtccaccttcttgagt
tctttatatatattggatgttagtcccctatctgatttaggataggtaaa
gatcctttcccaatatgttggcggcctttttgtcttattgacagtgtctt
ttgccttacagaagctttgcaattttatgaggtcccatttgtcaattctc
aatcttacagtacaggccattcctattgtattcaggaatttttcccctgt
gcccatatcttcaaggcttttcctcactttctcctctataagtttcagat
gcccctcaacagaggaatggatacagaaaatgtggtacatgtacacaatg
agtactactcagctattaaaaagaatgaatttatgaaattcctagacaaa
ttcctaggacctggagggcatcatcctgagtgaggtaacccaattacaaa
agaactcacatgacatgtactcattgataagtggatattagcccagaaac
ttagaataaccaagatacaagatacaaatttgcaaaacacatgaaactca
agaagaacaaagaccaaagtgtggatacattgctccttctgagaattggg
aacaaaacacccatggaagaagttacagagacaaagtttgggagctgaga
caaaaaggatggaccatctagagactgctatacccagggatccatcccat
aatcagcctccaatgctgacaccattgcatacactagcaagattttctga
aggaccctgagatagtctcttgtggaggctatgcccgggctagcaaacaa
agaaggtggattcccacagtcagttattggatgaatcaacagggttccca
tgaagagctagagaaggacaggagcctaagggtctgcatctataaggtgg
aacacacaatggaactacagttaaccgaacatgtctctagactcactatg
tgatttatgaaagaagtggtgctatcatcg
gaattccactacagatcaaaatgcagatacatgtacagtgccactctgac
atctaaggttcagggaacatcgggaacagtgggtaggaagacagtaagac
ccagaggaccaggatgtccacaataagagacataacagggaagctgctca
tgaattctcaacagaaggttatctaacaggacctgcctggtgactataat
agatgatatgagaaactgctgaggacaaggaaattttcataagggaccac
gcctagataaagagctataggcaatcaattagagctaggaaaaggagact
ctgtcttttcaaggatggagctacatgatacattatccaatcccctgaag
gtgtatttatgagcaatggattacccagtccatgctatatacacacacat
acacacactcacacacacactcacatacacatatgtatgcatatatgtat
gtttatatgacaggaattaaagagaaagtcaagtattagagaaggagtag
agacagcacaaagaagtcaagaaggagtgagaggggtagaaattatataa
attctatacttttctttgaaattctcaaaaaattaaatttagcaattgaa
ctataggcaattaatgaatgccaacaaggaaaaaaaaatgcctctcccac
gatgagcccttaaattggttgtgctatacaaaatgttcagccctgatacc
acatacattgtgagtactctcctgatgtatatcaggtcataagttctacc
ctattacatcaagaaagaaaaaagttgcaaattaataagccttaataaaa
atgttattattttgtattttctggaattattttttaagtcttagtgtcat
tagcacacaaatattttgatgtatatttgcatttgagtgattaactttcc
ctaaaataaattgtgtgcctatgaaagactgcatgtttataaggcaaaat
atcattttttatttttagaatggatatttaaattttcatataaatcacta
attatattaaatttgttcataacatgtttttattggattacttattagct
attatatgacttatagggacaccaccagagagataaatgcttgaatggga
attaattagtgatctacctatccattgaaatcgaacaactgctgtagcct
gagttcagaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_59912787_59913990
seq2: B6Ng01-118M22.g_67_1229

seq1  GAATTCCACTACAGATCAAAATGCAGATACATGTACAGTGCCACTCTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTACAGATCAAAATGCAGATACATGTACAGTGCCACTCTGAC  50

seq1  ATCTAAGGTTCAGGGAACATCGGGAACAGTGGGTAGGAAGACAGTAAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAGGTTCAGGGAACATCGGGAACAGTGGGTAGGAAGACAGTAAGAC  100

seq1  CCAGAGGACCAGGATGTCCACAATAAGAGACATAACAGGGAAGCTGCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGGACCAGGATGTCCACAATAAGAGACATAACAGGGAAGCTGCTCA  150

seq1  TGAATTCTCAACAGAAGGTTATCTAACAGGACCTGCCTGGTGACTATAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTCTCAACAGAAGGTTATCTAACAGGACCTGCCTGGTGACTATAAT  200

seq1  AGATGATATGAGAAACTGCTGAGGACAAGGAAATTTTCATAAGGGACCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATATGAGAAACTGCTGAGGACAAGGAAATTTTCATAAGGGACCAC  250

seq1  GCCTAGATAAAGAGCTATAGGCAATCAATTAGAGCTAGGAAAAGGAGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGATAAAGAGCTATAGGCAATCAATTAGAGCTAGGAAAAGGAGACT  300

seq1  CTGTCTTTTCAAGGATGGAGCTACATGATACATTATCCAATCCCCTGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTTTCAAGGATGGAGCTACATGATACATTATCCAATCCCCTGAAG  350

seq1  GTGTATTTATGAGCAATGGATTACCCAGTCCATGCTATATACACACACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATTTATGAGCAATGGATTACCCAGTCCATGCTATATACACACACAT  400

seq1  ACACACACTCACACACACACTCACATACACATATGTATGCATATATGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACTCACACACACACTCACATACACATATGTATGCATATATGTAT  450

seq1  GTTTATATGACAGGAATTAAAGAGAAAGTCAAGTATTAGAGAAGGAGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATATGACAGGAATTAAAGAGAAAGTCAAGTATTAGAGAAGGAGTAG  500

seq1  AGACAGCACAAAGAAGTCAAGAAGGAGTGAGAGGGGTAGAAATTATATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCACAAAGAAGTCAAGAAGGAGTGAGAGGGGTAGAAATTATATAA  550

seq1  ATTCTATACTTTTCTTTGAAATTCTCAAAAAATTAAATTTAGCAATTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTATACTTTTCTTTGAAATTCTCAAAAAATTAAATTTAGCAATTGAA  600

seq1  CTATAGGCAATTAATGAATGCCAACAAGGAAAAAAAAATGCCTCTCCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGGCAATTAATGAATGCCAACAAGGAAAAAAAAATGCCTCTCCCAC  650

seq1  GATGAGCCCTTAAATTGGTTGTGCTATACAAAATGTTCAGCCCTGATACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGCCCTTAAATTGGTTGTGCTATACAAAATGTTCAGCCCTGATACC  700

seq1  ACATACATTGTGAGTACTCTCCTGATGTATATCAGGTCATAAGTTCTACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATTGTGAGTACTCTCCTGATGTATATCAGGTCATAAGTTCTACC  750

seq1  CTATTACATCAAGAAAGAAAAAAGTTGCAAATTAATAAGCCTTAATAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTACATCAAGAAAGAAAAAAGTTGCAAATTAATAAGCCTTAATAAAA  800

seq1  ATGTTATTATTTTGTATTTTCTGGAATTATTTTTTAAGTCTTAGTGTCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATTATTTTGTATTTTCTGGAATTATTTTTTAAGTCTTAGTGTCAT  850

seq1  TAGCACACAAATATTTTGATGTATATTTGCATTTGAGTGATTAACTTTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACACAAATATTTTGATGTATATTTGCATTTGAGTGATTAACTTTCC  900

seq1  CTAAAATTAAATTGTGTGCCTATGAAAGACTGCATGTTTATAAAGGCAAA  950
      |||||| |||||||||||||||||||||||||||||||||| ||||| ||
seq2  CTAAAA-TAAATTGTGTGCCTATGAAAGACTGCATGTTTAT-AAGGC-AA  947

seq1  AATATCATTTTTTATTTTTAGAATGGATATTTAAATTTTCATTATTAAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||   |||||
seq2  AATATCATTTTTTATTTTTAGAATGGATATTTAAATTTTCAT--ATAAAT  995

seq1  CACTTAAATTATATTTAAAATTTTGTTCATAAACATG-TTTTATTGGATT  1049
      ||||  |||||||||   || ||||||||| |||||| ||||||||||||
seq2  CACT--AATTATATT---AAATTTGTTCAT-AACATGTTTTTATTGGATT  1039

seq1  ACTTATTAAGCTAATTTATATGAACTTATAGGGGACAAAACAACAAAGAG  1099
      ||||||| |||||  ||||||| ||||||||||   | | || || ||||
seq2  ACTTATT-AGCTA--TTATATG-ACTTATAGGG---ACACCACCAGAGAG  1082

seq1  AAGAATAAAAAATAGCTTGGAAATGGAGAAATTAAAATTTAAGTGATCTA  1149
      |  |||        |||||  ||||  | ||||||    | |||||||||
seq2  ATAAAT--------GCTTG--AATG--GGAATTAA----TTAGTGATCTA  1116

seq1  CTCTTATCCATGAAACATCAGAAAACAAACTGCTGTAGCCCAGAGTTCAG  1199
        | |||||||  || ||| |||    ||||||||||| || ||||||||
seq2  --CCTATCCATTGAA-ATC-GAA---CAACTGCTGTAG-CCTGAGTTCAG  1158

seq1  AGGGA  1204
      |||||
seq2  AGGGA  1163