BAC Information

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BAC

Clone NameB6Ng01-119F09
Chromosome7 (Build37)
Map Location 9,166,001 - 9,367,674
singlet/doubletdoublet
Overlap geneLOC100042039, LOC100042781, LOC665539, LOC100042795, LOC100042060, EG665552
Upstream geneLOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909
Downstream geneLOC100042790, LOC100042803, LOC665598, LOC100042810, LOC665593, EG665582, EG434113, EG665577, LOC665571, LOC100042083, Gm1961, V2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105, LOC100042859, LOC100042113, LOC100042120, LOC100042126, LOC100042139, LOC100042894
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119F09.bB6Ng01-119F09.g
ACCDH923581DH923582
length1,059698
definitionDH923581|Mus musculus domesticus DNA, BAC clone: B6Ng01-119F09, 5' end.DH923582|Mus musculus domesticus DNA, BAC clone: B6Ng01-119F09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,366,616 - 9,367,674)(9,166,001 - 9,166,687)
sequence
gaattccttttgcagtttgacattaatagtttataggtgcttcttcttat
gtttgttcacatgcaaatgtggaataaataatttatatcagtagttccag
atgttctgattgtcaaattgacagttagaattatattttcaaaataaaat
attcttagtactaaactgggaataactgtcactcaattgtctatcactaa
ctcatgcttcattcactactattcgtatgaggtatgaaatagtatttcgt
ggtcttttcatctagctcaatttcatatgtctaggtaccagaatgtgtta
tgaaaattttgttctattatgatggattagatttgtttaaacttgttgta
ttttattattctctcatagaatcctgtcattttctaatgagtgacataaa
gaggatctgataataaggaaaggaaataggcatattaactatgatatatt
tgccagtaaaactgacaattgttcatatcccaatagaaggaatggaaact
gtaattaggatatattatgtgagaaatacaagttattttcaatcaataaa
acaattaaaattttaaaaaatctccctgttctcagagaatgatctttctg
ttgtgtgtggtgttcttttggtaggtgtttttgtaaagaattattccaca
catatccatcaaatatattgtttttgaattacctttttccctcttattaa
acattatactgttttcctccattttttaataaagaaaagttctcctcttg
tatatgaatatgtcttcctaccctctgcaggcaacttaggaatgtcttaa
aaaaatccagttttgttgtctttgatttcatttagagaatgttaacaaaa
aagttcaattataactgaaaattatttgatgattttgtctgggttgctgt
tatgctgtacttgaggtgtgttaataacctttattttttctgtgttctag
tgctgttttataggttcctttgaccttctggtcatctatgtaaaagaagt
gaaccggaatctttaatttactaaaaagtcatgtttctatgaatatgaat
ttctgtaat
gaattcaagaagctgtactccagacaagcaaataaccccatttaaaaatg
gagtacagacaaaactaaacaaagaattcttgactgaggaataccaaatg
gatgaaaagcacataaaagaatgttcaacatccttaatcaccagggaaat
gcaaatcaaaacaaccgtgagattcaacctcacaccagtcagaatggcta
agatcaaaaattcaggtgctagcagatgctggcaaggatgtggtaaaaga
ggaacactcctccattgctgatgggattgcgagctggtacaaccactctg
gaaatcagtctggtagttcctcagaaaattggcagaaatagtactaccgg
aggatccatcaatccctcccctgttcatatatccagaagacattccaact
tgtaatatggacacatgctccactgtgttcatagcagccttatttataat
agccagaaaattgaaagaacctggatgaccctcaatagaggaatggatac
agaaaatttattctaataactgatctcctctaaaataacatttattctaa
atttccaatcttgaattttaataatatttacttattctctttttacattt
aagtatatgcccctgtatatttttctagtcaccttgtaagtgtaggatcc
agtggagaacagagaatggtaaaggtcaacaggagcgtttgagttgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_9366616_9367674
seq2: B6Ng01-119F09.b_48_1106 (reverse)

seq1  ATTACAGAAAATCATATTCATAGAAACATGACTTTTTAGTAAATTTAAAG  50
      |||||||||| |||||||||||||||||||||||||||||||| ||||||
seq2  ATTACAGAAATTCATATTCATAGAAACATGACTTTTTAGTAAA-TTAAAG  49

seq1  ATTCC-GTTCAC-TCTTTTACATAAGATGACCAGAAGGTCAAAGGAACCT  98
      ||||| |||||| |||||||||| ||||||||||||||||||||||||||
seq2  ATTCCGGTTCACTTCTTTTACAT-AGATGACCAGAAGGTCAAAGGAACCT  98

seq1  AT-AGACAGCACTAGAACAACAGAAAAAATAAAGGTTATTAACACACCTC  147
      || | ||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATAAAACAGCACTAGAAC-ACAGAAAAAATAAAGGTTATTAACACACCTC  147

seq1  AAGTACAGCAATAACAGCAA-CCAGACAAAATCATCAAATAATTTTCAGT  196
      ||||||||| |||||||||| |||||||||||||||||||||||||||||
seq2  AAGTACAGC-ATAACAGCAACCCAGACAAAATCATCAAATAATTTTCAGT  196

seq1  TATAATTGAACTTTTTTGTTAACATTCTCTAAATGAAATCAAAGACAACA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTGAACTTTTTTGTTAACATTCTCTAAATGAAATCAAAGACAACA  246

seq1  AAACTGGATTTTTTTAAGACATTCCTAAGTTGCCTGCAGAGGGTAGGAAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGATTTTTTTAAGACATTCCTAAGTTGCCTGCAGAGGGTAGGAAG  296

seq1  ACATATTCATATACAAGAGGAGAACTTTTCTTTATTAAAAAATGGAGGAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTCATATACAAGAGGAGAACTTTTCTTTATTAAAAAATGGAGGAA  346

seq1  AACAGTATAATGTTTAATAAGAGGGAAAAAGGTAATTCAAAAACAATATA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTATAATGTTTAATAAGAGGGAAAAAGGTAATTCAAAAACAATATA  396

seq1  TTTGATGGATATGTGTGGAATAATTCTTTACAAAAACACCTACCAAAAGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGGATATGTGTGGAATAATTCTTTACAAAAACACCTACCAAAAGA  446

seq1  ACACCACACACAACAGAAAGATCATTCTCTGAGAACAGGGAGATTTTTTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCACACACAACAGAAAGATCATTCTCTGAGAACAGGGAGATTTTTTA  496

seq1  AAATTTTAATTGTTTTATTGATTGAAAATAACTTGTATTTCTCACATAAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTAATTGTTTTATTGATTGAAAATAACTTGTATTTCTCACATAAT  546

seq1  ATATCCTAATTACAGTTTCCATTCCTTCTATTGGGATATGAACAATTGTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCTAATTACAGTTTCCATTCCTTCTATTGGGATATGAACAATTGTC  596

seq1  AGTTTTACTGGCAAATATATCATAGTTAATATGCCTATTTCCTTTCCTTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTACTGGCAAATATATCATAGTTAATATGCCTATTTCCTTTCCTTA  646

seq1  TTATCAGATCCTCTTTATGTCACTCATTAGAAAATGACAGGATTCTATGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAGATCCTCTTTATGTCACTCATTAGAAAATGACAGGATTCTATGA  696

seq1  GAGAATAATAAAATACAACAAGTTTAAACAAATCTAATCCATCATAATAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATAATAAAATACAACAAGTTTAAACAAATCTAATCCATCATAATAG  746

seq1  AACAAAATTTTCATAACACATTCTGGTACCTAGACATATGAAATTGAGCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATTTTCATAACACATTCTGGTACCTAGACATATGAAATTGAGCT  796

seq1  AGATGAAAAGACCACGAAATACTATTTCATACCTCATACGAATAGTAGTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAAAAGACCACGAAATACTATTTCATACCTCATACGAATAGTAGTG  846

seq1  AATGAAGCATGAGTTAGTGATAGACAATTGAGTGACAGTTATTCCCAGTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGCATGAGTTAGTGATAGACAATTGAGTGACAGTTATTCCCAGTT  896

seq1  TAGTACTAAGAATATTTTATTTTGAAAATATAATTCTAACTGTCAATTTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACTAAGAATATTTTATTTTGAAAATATAATTCTAACTGTCAATTTG  946

seq1  ACAATCAGAACATCTGGAACTACTGATATAAATTATTTATTCCACATTTG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCAGAACATCTGGAACTACTGATATAAATTATTTATTCCACATTTG  996

seq1  CATGTGAACAAACATAAGAAGAAGCACCTATAAACTATTAATGTCAAACT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGAACAAACATAAGAAGAAGCACCTATAAACTATTAATGTCAAACT  1046

seq1  GCAAAAGGAATTC  1059
      |||||||||||||
seq2  GCAAAAGGAATTC  1059

seq1: chr7_9166001_9166687
seq2: B6Ng01-119F09.g_78_767

seq1  GAAGCTGTACTCCAGACAAGCAAATAACCCCATTTAAAAATGGAGTACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTGTACTCCAGACAAGCAAATAACCCCATTTAAAAATGGAGTACAG  50

seq1  ACAAAACTAAACAAAGAATTCTTGACTGAGGAATACCAAATGGATGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACTAAACAAAGAATTCTTGACTGAGGAATACCAAATGGATGAAAA  100

seq1  GCACATAAAAGAATGTTCAACATCCTTAATCACCAGGGAAATGCAAATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATAAAAGAATGTTCAACATCCTTAATCACCAGGGAAATGCAAATCA  150

seq1  AAACAACCGTGAGATTCAACCTCACACCAGTCAGAATGGCTAAGATCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAACCGTGAGATTCAACCTCACACCAGTCAGAATGGCTAAGATCAAA  200

seq1  AATTCAGGTGCTAGCAGATGCTGGCAAGGATGTGGTAAAAGAGGAACACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGGTGCTAGCAGATGCTGGCAAGGATGTGGTAAAAGAGGAACACT  250

seq1  CCTCCATTGCTGATGGGATTGCGAGCTGGTACAACCACTCTGGAAATCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATTGCTGATGGGATTGCGAGCTGGTACAACCACTCTGGAAATCAG  300

seq1  TCTGGTAGTTCCTCAGAAAATTGGCAGAAATAGTACTACCGGAGGATCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTAGTTCCTCAGAAAATTGGCAGAAATAGTACTACCGGAGGATCCA  350

seq1  TCAATCCCTCCCCTGTTCATATATCCAGAAGACATTCCAACTTGTAATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCCCTCCCCTGTTCATATATCCAGAAGACATTCCAACTTGTAATAT  400

seq1  GGACACATGCTCCACTGTGTTCATAGCAGCCTTATTTATAATAGCCAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACATGCTCCACTGTGTTCATAGCAGCCTTATTTATAATAGCCAGAA  450

seq1  AATTGAAAGAACCTGGATGACCCTCAATAGAGGAATGGATACAGAAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAAAGAACCTGGATGACCCTCAATAGAGGAATGGATACAGAAAATT  500

seq1  TATTCTAATAACTGATCTCCTCTAAAATAACATTTATTCTAAA-TTCCAA  549
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TATTCTAATAACTGATCTCCTCTAAAATAACATTTATTCTAAATTTCCAA  550

seq1  TCTTGAATTTTAATAATATTTACTTATTCTC-TTTTACATTTAAGTATAT  598
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCTTGAATTTTAATAATATTTACTTATTCTCTTTTTACATTTAAGTATAT  600

seq1  GCCCCTGTATA-TTTTCTAGTCACCTTGTAAGTGTAGGATCCAGTGGAGA  647
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTGTATATTTTTCTAGTCACCTTGTAAGTGTAGGATCCAGTGGAGA  650

seq1  ACAGAGAATGGCAAAGGTCAACAGGAGCGTATGAGTTGGA  687
      ||||||||||| |||||||||||||||||| |||||||||
seq2  ACAGAGAATGGTAAAGGTCAACAGGAGCGTTTGAGTTGGA  690