BAC Information

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BAC

Clone NameB6Ng01-119K16
ChromosomeY (Build37)7 (Build37)
Map Location 573,321 - 573,550101,750,439 - 101,751,556
singlet/doubletsingletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119K16.bB6Ng01-119K16.g
ACCDH923819DH923820
length4941,107
definitionDH923819|Mus musculus domesticus DNA, BAC clone: B6Ng01-119K16, 5' end.DH923820|Mus musculus domesticus DNA, BAC clone: B6Ng01-119K16, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(573,321 - 573,550)(101,750,439 - 101,751,556)
sequence
attcagggttctagattcataataatttccattgttccatttacttattt
gtgaaaaatgactggcagagtttgggaagtctttgaggtacagatttcca
ttcatcttcatggttattaggaaaatacaaaataccttatataaataagc
atccaatgagcaaatgtttaattttatctgtcttgtgtgaggctattcca
gtgcctggcaaatgcagaagtagatgctcacagtaatctattggatggaa
cacagggcccccaatggaggatctagagaaagtatccaaagagctgaagg
ggtctgcaaccctataggtggaacaacaatatgaactaatcagtacctcc
agagctcgtgtctctagctgcatatgtagcagaagatggcctagtcagcc
atcattgggaagagaggccccttggtcttgcaaactttatatacctcagt
agaggggaatgccagggctaagaagtgggagtgggtgggtaggg
gaattccctgactttttcccaagctttttggagctctagtcagcttgccc
tggaaggttccacatggagggcaatggactgcaagtctttactgtagagt
ccaaactttttatagatgataattgtagggaaagacgcacatctaaatgt
tgatttcttgtgctgtcttctagatttcaacagctttgctggctttgatt
acttggaaatccttatcattcacagggagaacttggtccccttcttgaga
tcctctttgcatcaaaatttggaatcaccttggagatgaagatgcctagc
tgggaggccttttctcctcaattgttaagccaactgagcaccaagaagca
tcttcagtgtgacaattaagggcagaaattgggtcaaataattgtagtct
gggtggtactctctctcatgtggaggaatccatccatgctggaagatttt
cataggcacacagaaaaatcactgagaagtcataaggaatccagctgtcc
atttcaggaaaagcctagcaaatagtctttcctcagtggtgcctcagata
tcagccaccacatgcttgattttgaaagaaaagtttgtagggatttttta
aattttatttttcatcttaaactgaggactgggatggtaaggaaatagaa
gagggtaggaggtaaaaatctgtcaagatccactgagtacacgtgtaaag
ttatctaagaacaaatttaattaataaaacaatttaaaaattctatcctc
tgcctagtctcttgatttttaatttcagacacaagatggcactattagta
gtgattttaatttaacctgtagataacaatcagagagatttgtgtatatt
caaacaaagtgtctaagtatataaagtcagtaagtggcacatggatgtac
atccacacagccatggctgattaatattacatctggatgaatagtcaaat
ttagtcaaccactgttctcttgacatcaacatgacagattgagattttta
gatcatttcatgagaaatttccgtgttagcacgcagtcaccatatatttg
caataaagtatgatgataaagatgatacgaatgatttcagcacaagatag
catgcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573321_573550
seq2: B6Ng01-119K16.b_314_544

seq1  ATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAAACCT  50
      |||||||| |||||||||||| |||| ||||| ||||| ||||||| |||
seq2  ATGGAGGATCTAGAGAAAGTATCCAAAGAGCTGAAGGGGTCTGCAACCCT  50

seq1  ATAGATGGAACAACAATATGAA-TAACCAGTATCCACAGAGCTCATGTCT  99
      |||| ||||||||||||||||| ||| ||||| |  |||||||| |||||
seq2  ATAGGTGGAACAACAATATGAACTAATCAGTACCTCCAGAGCTCGTGTCT  100

seq1  CTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCATTGGGAAGA  149
      ||||||||||||||| ||||||||||||||||  ||||||||||||||||
seq2  CTAGCTGCATATGTAGCAGAAGATGGCCTAGTCAGCCATCATTGGGAAGA  150

seq1  GAGGCCCCTTGGTCTTGCAAACTTTATATGCCCCAGTACAGGGGAACACC  199
      ||||||||||||||||||||||||||||| || ||||| |||||||  ||
seq2  GAGGCCCCTTGGTCTTGCAAACTTTATATACCTCAGTAGAGGGGAATGCC  200

seq1  AGGGCCAAGAAGTGGGAGAAGGTGGGTAGGG  230
      ||||| ||||||||||||  |||||||||||
seq2  AGGGCTAAGAAGTGGGAGTGGGTGGGTAGGG  231

seq1: chr7_101750439_101751556
seq2: B6Ng01-119K16.g_65_1171

seq1  GAATTCCCTGACTTTTTCCCAAGCTTTTTGGAGCTCTAGTCAGCTTGCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGACTTTTTCCCAAGCTTTTTGGAGCTCTAGTCAGCTTGCCC  50

seq1  TGGAAGGTTCCACATGGAGGGCAATGGACTGCAAGTCTTTACTGTAGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGTTCCACATGGAGGGCAATGGACTGCAAGTCTTTACTGTAGAGT  100

seq1  CCAAACTTTTTATAGATGATAATTGTAGGGAAAGACGCACATCTAAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTTTTTATAGATGATAATTGTAGGGAAAGACGCACATCTAAATGT  150

seq1  TGATTTCTTGTGCTGTCTTCTAGATTTCAACAGCTTTGCTGGCTTTGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCTTGTGCTGTCTTCTAGATTTCAACAGCTTTGCTGGCTTTGATT  200

seq1  ACTTGGAAATCCTTATCATTCACAGGGAGAACTTGGTCCCCTTCTTGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGAAATCCTTATCATTCACAGGGAGAACTTGGTCCCCTTCTTGAGA  250

seq1  TCCTCTTTGCATCAAAATTTGGAATCACCTTGGAGATGAAGATGCCTAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTTGCATCAAAATTTGGAATCACCTTGGAGATGAAGATGCCTAGC  300

seq1  TGGGAGGCCTTTTCTCCTCAATTGTTAAGCCAACTGAGCACCAAGAAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGCCTTTTCTCCTCAATTGTTAAGCCAACTGAGCACCAAGAAGCA  350

seq1  TCTTCAGTGTGACAATTAAGGGCAGAAATTGGGTCAAATAATTGTAGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGTGTGACAATTAAGGGCAGAAATTGGGTCAAATAATTGTAGTCT  400

seq1  GGGTGGTACTCTCTCTCATGTGGAGGAATCCATCCATGCTGGAAGATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGTACTCTCTCTCATGTGGAGGAATCCATCCATGCTGGAAGATTTT  450

seq1  CATAGGCACACAGAAAAATCACTGAGAAGTCATAAGGAATCCAGCTGTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGCACACAGAAAAATCACTGAGAAGTCATAAGGAATCCAGCTGTCC  500

seq1  ATTTCAGGAAAAGCCTAGCAAATAGTCTTTCCTCAGTGGTGCCTCAGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGGAAAAGCCTAGCAAATAGTCTTTCCTCAGTGGTGCCTCAGATA  550

seq1  TCAGCCACCACATGCTTGATTTTGAAAGAAAAGTTTGTAGGGATTTTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCACCACATGCTTGATTTTGAAAGAAAAGTTTGTAGGGATTTTTTA  600

seq1  AATTTTATTTTTCATCTTAAACTGAGGACTGGGATGGTAAGGAAATAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATTTTTCATCTTAAACTGAGGACTGGGATGGTAAGGAAATAGAA  650

seq1  GAGGGTAGGAGGTAAAAATCTGTCAAGATCCACTGAGTACACGTGTAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTAGGAGGTAAAAATCTGTCAAGATCCACTGAGTACACGTGTAAAG  700

seq1  TTATCTAAGAACAAATTTAATTAATAAAACAATTTAAAAATTCTATCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTAAGAACAAATTTAATTAATAAAACAATTTAAAAATTCTATCCTC  750

seq1  TGCCTAGTCTCTTGATTTTTAATTTCAGACACAAGATGGCACTATTAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAGTCTCTTGATTTTTAATTTCAGACACAAGATGGCACTATTAGTA  800

seq1  GTGATTTTAATTTAACCTGTAGATAACAATCAGAGAGATTTGTGTATATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTTAATTTAACCTGTAGATAACAATCAGAGAGATTTGTGTATATT  850

seq1  CAAACAAAGTGTCTAAGTATATAAAGTCAGTAAGTGGCACATGGATGTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAAGTGTCTAAGTATATAAAGTCAGTAAGTGGCACATGGATGTAC  900

seq1  ATCCACACAGCCATGGCTGATTAATATTAACATCTGGATGAATAGTCAAA  950
      |||||||||||||||||||||||||||| |||||||||||||||||| ||
seq2  ATCCACACAGCCATGGCTGATTAATATT-ACATCTGGATGAATAGTC-AA  948

seq1  ATTTAGTCAACCAACTGTTCTCTTGACATCAACATGACAGATTGAGATTT  1000
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTCAACC-ACTGTTCTCTTGACATCAACATGACAGATTGAGATTT  997

seq1  TTTAAGAATCATTTCCATGAGAAATTTCCGTGTTAGGCACGCAGTCACCA  1050
      ||  || ||||||| |||||||||||||||||||| ||||||||||||||
seq2  TT--AG-ATCATTT-CATGAGAAATTTCCGTGTTA-GCACGCAGTCACCA  1042

seq1  TATATTTGCAATAAAGTATGAATGATAAAGATTGATAACAGAATGATTTC  1100
      |||||||||||||||||||| |||||||||| |||||   ||||||||||
seq2  TATATTTGCAATAAAGTATG-ATGATAAAGA-TGATA--CGAATGATTTC  1088

seq1  AGCACAAG-TAGCATGCCT  1118
      |||||||| ||||||||||
seq2  AGCACAAGATAGCATGCCT  1107