BAC Information

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BAC

Clone NameB6Ng01-119L08
Chromosome7 (Build37)
Map Location 94,043,761 - 94,244,824
singlet/doubletdoublet
Overlap geneLOC637896, EG621430
Upstream geneEG546980, LOC666382, LOC637652, LOC637667, EG666418, LOC100039471, EG546981, Vmn2r-ps86, Vmn2r76, Olfr310, Olfr309, Olfr308, Olfr307, Olfr306-ps1, Olfr305, Olfr304, Olfr303, Olfr301, Olfr1531-ps1, Olfr300-ps1, Olfr299, Olfr298, Olfr297, Olfr296-ps1, Olfr295, Olfr294, Olfr293, Olfr292, Folh1, EG546983, Vmn2r-ps87
Downstream geneLOC621477, Nox4, Tyr, Grm5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119L08.bB6Ng01-119L08.g
ACCDH923851DH923852
length1,0531,088
definitionDH923851|Mus musculus domesticus DNA, BAC clone: B6Ng01-119L08, 5' end.DH923852|Mus musculus domesticus DNA, BAC clone: B6Ng01-119L08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,244,286 - 94,244,824)(94,043,761 - 94,044,616)
sequence
gaattcctaagacaggtatggccaccagccacaataactcccaggcagga
ctatggggcataaataaattttatgcctcaatccagctatttttattata
taatcagggaggtattgtatgctcccccagcctgaagcaggctgatctag
actttggccttgctgccactaagaaggagtttacctagggtggagccttc
cgacctagatggctcttttgttctgtcacctgccactgctctctccaaga
cacttctacctgctgagagccctgagatattctggaggaacatcctatct
tgcacatcaccttacaggctggctccagacaccaagaatggactggcagg
gtatgggccttcccccttataagcacactctcttagtaaactggcgggcc
ttgaacagaaccgtgtcttggtctccattaatctctcactgtctaagtct
ttttcagccccagcctgcctcccaggtatacctggttcaagtaggccaca
gcccggtatactatatatgtgaacaaaacactcacaagacttaaatggga
gattgtatctgggaaagagaaaggagtaatagtaaaaaaaaaaaggaaag
gcaggaccaggtattagaaggggcagaattacagagattcaagaatttga
atagaaacatgtagcactggggaatgagaacctgtctgcagccattagaa
agtctcagactccagggaaatgatatgctactaggactcaatggtgattg
ctttagttgaaataccgaacaaaggggagatacaaccatagggaccactt
tagtagataggcagggtcctttagttgaggtatggggtcttccacacaac
tcaaaaattttaacccagaaatgttcctctccaaaggaagacaggaacaa
aaatggaacagagaatgaaggaaaggccaccagagacaggcccacctagg
gatccatatcatattcattaccaaatccccccactaatgatgatgtcata
gcttgtagacaagagcctgtatggattatccctgagaagttctacggtat
ctg
gaattccttgaggttgaccttagctttaatgaccaaggtggattgataaa
acctgaagaaatcagctccagtagttggactgggttcgcacgggaaggat
ggggacaccagtcaacatgcaaaatttttggcccagaaatgttcctgttt
aaaagaaatgcagggacaaaaatgaagcagacactgaaggaatagcacat
taatgacctgcccaatttgggatccatcccatcaacaggcaccaatagct
gaccatattactgatattatgttgttcttacagccagaagctcagcatga
ctatcctatgggaggatctactacagtggactaagactcatgaagatata
tgcatccagcaataggactaaggtaaggtcccatctggaagagttagggg
aaggttgaaggatctaaaggtcatggcaaagccaaaggaaaaccaacagt
gtcaactaatctggtccttggtgtgctcataaaggctaagccatgaatcg
aagagcatgcatgggctggcccaactccccaagcagatatgtaggagagt
actaccctttctgtcttcagtgggagaggatgtgccaaatcctgtagaga
tttgatattccaggaagggggatccctggagacagaggataccttctctg
aggtgacaagagttgggatgagttgaagatctctgggattaatgaaaggg
agggtcaacatttggcatgtaaataaataaaatataatgaaaaataattt
tctataatagaggtaggaaacactattttgaatatgatgattctcaatga
atactataacactgtgaatcttgggtagttatatcttacagttattagta
aaactggcagataatgatgcctaagaaaattcatatattgaattagatat
gaaagtgatatttctcagttcttcaccaaatgctcccaaccaagactctt
ggtatctatcagttgagcctctcattagacacctttctagctctctctgt
aaacacagcaatagcatcagtacagttcagtttggagcctgccctgagat
ggatccaattttgcagtcactgaatcttcccacccctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_94244286_94244824
seq2: B6Ng01-119L08.b_48_586 (reverse)

seq1  TCTTGTGAGTGTTTTGTTCACATATATAGTATACCGGGCTGTGGCCTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGAGTGTTTTGTTCACATATATAGTATACCGGGCTGTGGCCTACT  50

seq1  TGAACCAGGTATACCTGGGAGGCAGGCTGGGGCTGAAAAAGACTTAGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCAGGTATACCTGGGAGGCAGGCTGGGGCTGAAAAAGACTTAGACA  100

seq1  GTGAGAGATTAATGGAGACCAAGACACGGTTCTGTTCAAGGCCCGCCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAGATTAATGGAGACCAAGACACGGTTCTGTTCAAGGCCCGCCAGT  150

seq1  TTACTAAGAGAGTGTGCTTATAAGGGGGAAGGCCCATACCCTGCCAGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAAGAGAGTGTGCTTATAAGGGGGAAGGCCCATACCCTGCCAGTCC  200

seq1  ATTCTTGGTGTCTGGAGCCAGCCTGTAAGGTGATGTGCAAGATAGGATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGGTGTCTGGAGCCAGCCTGTAAGGTGATGTGCAAGATAGGATGT  250

seq1  TCCTCCAGAATATCTCAGGGCTCTCAGCAGGTAGAAGTGTCTTGGAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCAGAATATCTCAGGGCTCTCAGCAGGTAGAAGTGTCTTGGAGAGA  300

seq1  GCAGTGGCAGGTGACAGAACAAAAGAGCCATCTAGGTCGGAAGGCTCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGGCAGGTGACAGAACAAAAGAGCCATCTAGGTCGGAAGGCTCCAC  350

seq1  CCTAGGTAAACTCCTTCTTAGTGGCAGCAAGGCCAAAGTCTAGATCAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGTAAACTCCTTCTTAGTGGCAGCAAGGCCAAAGTCTAGATCAGCC  400

seq1  TGCTTCAGGCTGGGGGAGCATACAATACCTCCCTGATTATATAATAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCAGGCTGGGGGAGCATACAATACCTCCCTGATTATATAATAAAAA  450

seq1  TAGCTGGATTGAGGCATAAAATTTATTTATGCCCCATAGTCCTGCCTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGGATTGAGGCATAAAATTTATTTATGCCCCATAGTCCTGCCTGGG  500

seq1  AGTTATTGTGGCTGGTGGCCATACCTGTCTTAGGAATTC  539
      |||||||||||||||||||||||||||||||||||||||
seq2  AGTTATTGTGGCTGGTGGCCATACCTGTCTTAGGAATTC  539

seq1: chr7_94043761_94044616
seq2: B6Ng01-119L08.g_316_1156

seq1  GCTGACCATATTACTGATATTATGTTGTTCTTACAGCCAGAAGCTCAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACCATATTACTGATATTATGTTGTTCTTACAGCCAGAAGCTCAGCA  50

seq1  TGACTATCCTATGGGAGGATCTACTACAGTGGACTAAGACTCATGAAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTATCCTATGGGAGGATCTACTACAGTGGACTAAGACTCATGAAGAT  100

seq1  ATATGCATCCAGCAATAGGACTAAGGTAAGGTCCCATCTGGAAGAGTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCATCCAGCAATAGGACTAAGGTAAGGTCCCATCTGGAAGAGTTAG  150

seq1  GGGAAGGTTGAAGGATCTAAAGGTCATGGCAAAGCCAAAGGAAAACCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGTTGAAGGATCTAAAGGTCATGGCAAAGCCAAAGGAAAACCAAC  200

seq1  AGTGTCAACTAATCTGGTCCTTGGTGTGCTCATAAAGGCTAAGCCATGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCAACTAATCTGGTCCTTGGTGTGCTCATAAAGGCTAAGCCATGAA  250

seq1  TCGAAGAGCATGCATGGGCTGGCCCAACTCCCCAAGCAGATATGTAGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAAGAGCATGCATGGGCTGGCCCAACTCCCCAAGCAGATATGTAGGAG  300

seq1  AGTACTACCCTTTCTGTCTTCAGTGGGAGAGGATGTGCCAAATCCTGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTACCCTTTCTGTCTTCAGTGGGAGAGGATGTGCCAAATCCTGTAG  350

seq1  AGATTTGATATTCCAGGAAGGGGGATCCCTGGAGACAGAGGATACCTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGATATTCCAGGAAGGGGGATCCCTGGAGACAGAGGATACCTTCT  400

seq1  CTGAGGTGACAAGAGTTGGGATGAGTTGAAGATCTCTGGGATTAATGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGTGACAAGAGTTGGGATGAGTTGAAGATCTCTGGGATTAATGAAA  450

seq1  GGGAGGGTCAACATTTGGCATGTAAATAAATAAAATATAATGAAAAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGTCAACATTTGGCATGTAAATAAATAAAATATAATGAAAAATAA  500

seq1  TTTTCTATAATAGAGGTAGGAAACACTATTTTGAATATGATGATTCTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTATAATAGAGGTAGGAAACACTATTTTGAATATGATGATTCTCAA  550

seq1  TGAATACTATAACACTGTGAATCTTGGGTAGTTATATCTTACAGTAATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGAATACTATAACACTGTGAATCTTGGGTAGTTATATCTTACAGTTATTA  600

seq1  GTAAAACTGGCAGATAATGATGCCTAAGAAAATTCATATATTGAATTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GTAAAACTGGCAGATAATGATGCCTAAGAAAATTCATATATTGAATTAG-  649

seq1  ATATTGAAAGTGATATTTTCTCAGTTCTTTCACCAAATGCTCCCAACCAA  700
      ||| ||||||||||| ||||||||||| ||||||||||||||||||||||
seq2  ATA-TGAAAGTGATA-TTTCTCAGTTC-TTCACCAAATGCTCCCAACCAA  696

seq1  GACTCCTTGGTATCTTATCAGTTGAGCCTCTCATTAGACAACCTTTCTAG  750
      |||| ||||||||| |||||||||||||||||||||||| ||||||||| 
seq2  GACT-CTTGGTATC-TATCAGTTGAGCCTCTCATTAGAC-ACCTTTCTA-  742

seq1  GCTCCTCTCTGTAAACACAGC-ATAGCATCAGTAACAGTGTCAGGTTTTG  799
      ||| ||||||||||||||||| ||||||||||| ||||| ||||  ||||
seq2  GCT-CTCTCTGTAAACACAGCAATAGCATCAGT-ACAGT-TCAG--TTTG  787

seq1  GAGCCTGCCCTTGAGATGGATCCCAATTTTGGCAGGTCACTGGATC-TCC  848
      |||||||||| |||||||||| |||||||| ||| ||||||| ||| |||
seq2  GAGCCTGCCC-TGAGATGGAT-CCAATTTT-GCA-GTCACTGAATCTTCC  833

seq1  CACCCCTC  856
      ||||||||
seq2  CACCCCTC  841