BAC Information

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BAC

Clone NameB6Ng01-120C10
Chromosome7 (Build37)
Map Location 122,118,050 - 122,243,016
singlet/doubletdoublet
Overlap genenone
Upstream geneSpon1, Rras2, LOC668451, Copb1, Psma1, 4933406I18Rik, Pde3b, Cyp2r1, Calca, LOC100043295, Calcb, Insc, EG627967
Downstream geneLOC668472, Sox6, LOC100042779, 1110006G14Rik, EG668479, LOC100043313, 1110004F10Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120C10.bB6Ng01-120C10.g
ACCDH924169DH924170
length1,150797
definitionDH924169|Mus musculus domesticus DNA, BAC clone: B6Ng01-120C10, 5' end.DH924170|Mus musculus domesticus DNA, BAC clone: B6Ng01-120C10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(122,241,862 - 122,243,016)(122,118,050 - 122,118,846)
sequence
gaattcttcttctggttatgatagaagagtctctgctataactctgctta
ggaagaatatcttcaaagactggttagacatgcacacacaaaagaaacgt
aacttacggaaagcaggagagaagagccagggcagccaggaccttggtgg
ctatggcctctaagaggagagaaacgcattaaagtcccctaatcaccatt
tcttttcctctggggggcattttccagttcagaatgtggaacatagccag
tgggcagaaaacgatagtataatgtttatggaagtttcattttcctggaa
gacaaaatactagaatggtaagctgtcaggataatcaagatggagtagcc
agggtactaagagtaaaaggagctccagtctgacttgagctagatacact
ctcagaagggtaaaaaataaagaaacaagaacagagtgactgataagaaa
tggaaattccaaggagagttccagaaacctcaaagggagcagggagactt
aggttttcagcagagacatctgtagaactactcatggataatagcccata
aataacgcagccctctttagtactgaaactcgtccccagttaaaggaatc
taggctttggagtaaaacagtgacttagaagttgccttcatgtgacttgc
taaagggagagacagaataaaaaataaaaagaaaaataaagaagagaaaa
gagaagagaatagcaaagcaaagcaaaacaaagcaagagcttcagaagtc
caaaaggaaggaagaggttaactagaacatggggagagaaggatgatagt
gccccaagctgaacacagcctcagagcattggtggggaggaggatttgtt
tacttttctctgagtgatttgtcaactgagccttcacaattaggccactc
aataagaaaacactaaatttaaaaaggcagatgaaataacaaaccagtga
ttgcacacccaggataaaaccacaagaaacatgaaggagcgagggggtat
ggcttctcaaagaagtgcaattacccaactgttcaacgccagacactgat
atgggcaggaggcagaagaagaaattcaaagttcatggtgtgagaaagac
ttgtgcttggagtgttaaaaggagtaatgcactcagtcgggagaggaaag

gaattccagatcccttaccttcatctattaatatgtatcactacaattca
agaagcgcttttgtttctgtaaccaaaaagattcttgcagtgtctatgtg
catttttaagaatgctttttctttttcaaaaaacattattattttcttat
tattttatgtgtttgggtattttgtctgtacacgtgcctgtataccacat
gtgtacctggtgcctatggaatccagaatagggtcttagatcccctggaa
ctggagttacagatcatcgtgagccaaggggtggctgctgggaattgaac
ctggcttctctagaagagaaggaagcactcttaactactactgccaaggt
agcccaatgtgtatattttggtagaggaatgaaagagagtaattctagaa
ctttctcggatggcagtatagggaatcataggcctgttccatattttcca
acagagatatcatctttgtgtgaagttgtgtgggaagaagagagaaagat
ctccctctgaaagcttcatactgtctctctgatgtggtactcactggact
gccccaggaggatatgcggagcacttttgctgtatcagctcagaggctgc
cacataatccaggctcatcttgtaaccttgaacagtattttttcaattaa
ttctgtcttggatctgaggaagaaagtggaaaggataaagactatgggaa
tagagaatagagatggcgatatagggcagggagaaggacacacacaaata
cacaaacaagagagagagagggaaagataggtagatgggggagggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_122241862_122243016
seq2: B6Ng01-120C10.b_47_1196 (reverse)

seq1  CTTTCTTCTCCCAAACTGAGTGCATCTACTCCTTTTTACACTCAAGCCAC  50
      ||||| ||||||  ||||||||||| |||||||||| |||||| |  |||
seq2  CTTTCCTCTCCC-GACTGAGTGCAT-TACTCCTTTTAACACTCCAAGCAC  48

seq1  AAGTCTTTCTCACA-CATGGACTTTTGATGTCTTCTTCTGGCCTTCTGCC  99
      |||||||||||||| |||| |||||  || ||||||||| |||| |||||
seq2  AAGTCTTTCTCACACCATGAACTTTGAATTTCTTCTTCT-GCCTCCTGCC  97

seq1  CATATCAGTGTCTTGGCGTTGAACAGTTGGGTAATTGCACTTCTTTGAGG  149
      |||||||||||| |||||||||||||||||||||||||||||||||||| 
seq2  CATATCAGTGTC-TGGCGTTGAACAGTTGGGTAATTGCACTTCTTTGAGA  146

seq1  AGCCATACCACCTCGCTCCTTCATGTTTCTTGTGGTTTTATCCTTGGGTG  199
      ||||||||| ||||||||||||||||||||||||||||||||| ||||||
seq2  AGCCATACCCCCTCGCTCCTTCATGTTTCTTGTGGTTTTATCC-TGGGTG  195

seq1  TGCAATCACTTGGTTTGTTATTTCTTCTGCCTTTTT-AATTTAGTGTTTT  248
      ||||||||| |||||||||||||| ||||||||||| |||||||||||||
seq2  TGCAATCAC-TGGTTTGTTATTTCATCTGCCTTTTTAAATTTAGTGTTTT  244

seq1  CTTATTGAGTGGCCTAATTGTGAAGGCTCAGTTGACAAAATCACTCAGAG  298
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTTATTGAGTGGCCTAATTGTGAAGGCTCAGTTGAC-AAATCACTCAGAG  293

seq1  AAAAGTAAACAAATCCTCCTCCCCACCAATGCTCTGAGGCTGTGTTCAGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAAACAAATCCTCCTCCCCACCAATGCTCTGAGGCTGTGTTCAGC  343

seq1  TTGGGGCACTATCATCCTTCTCTCCCCATGTTCTAGTTAACCTCTTCCTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGCACTATCATCCTTCTCTCCCCATGTTCTAGTTAACCTCTTCCTT  393

seq1  CCTTTTGGACTTCTGAAGCTCTTGCTTTGTTTTGCTTTGCTTTGCTATTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTGGACTTCTGAAGCTCTTGCTTTGTTTTGCTTTGCTTTGCTATTC  443

seq1  TCTTCTCTTTTCTCTTCTTTATTTTTCTTTTTATTTTTTATTCTGTCTCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCTTTTCTCTTCTTTATTTTTCTTTTTATTTTTTATTCTGTCTCT  493

seq1  CCCTTTAGCAAGTCACATGAAGGCAACTTCTAAGTCACTGTTTTACTCCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTAGCAAGTCACATGAAGGCAACTTCTAAGTCACTGTTTTACTCCA  543

seq1  AAGCCTAGATTCCTTTAACTGGGGACGAGTTTCAGTACTAAAGAGGGCTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTAGATTCCTTTAACTGGGGACGAGTTTCAGTACTAAAGAGGGCTG  593

seq1  CGTTATTTATGGGCTATTATCCATGAGTAGTTCTACAGATGTCTCTGCTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTATTTATGGGCTATTATCCATGAGTAGTTCTACAGATGTCTCTGCTG  643

seq1  AAAACCTAAGTCTCCCTGCTCCCTTTGAGGTTTCTGGAACTCTCCTTGGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTAAGTCTCCCTGCTCCCTTTGAGGTTTCTGGAACTCTCCTTGGA  693

seq1  ATTTCCATTTCTTATCAGTCACTCTGTTCTTGTTTCTTTATTTTTTACCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCATTTCTTATCAGTCACTCTGTTCTTGTTTCTTTATTTTTTACCC  743

seq1  TTCTGAGAGTGTATCTAGCTCAAGTCAGACTGGAGCTCCTTTTACTCTTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGAGTGTATCTAGCTCAAGTCAGACTGGAGCTCCTTTTACTCTTA  793

seq1  GTACCCTGGCTACTCCATCTTGATTATCCTGACAGCTTACCATTCTAGTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCTGGCTACTCCATCTTGATTATCCTGACAGCTTACCATTCTAGTA  843

seq1  TTTTGTCTTCCAGGAAAATGAAACTTCCATAAACATTATACTATCGTTTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTCCAGGAAAATGAAACTTCCATAAACATTATACTATCGTTTT  893

seq1  CTGCCCACTGGCTATGTTCCACATTCTGAACTGGAAAATGCCCCCCAGAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCACTGGCTATGTTCCACATTCTGAACTGGAAAATGCCCCCCAGAG  943

seq1  GAAAAGAAATGGTGATTAGGGGACTTTAATGCGTTTCTCTCCTCTTAGAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAAATGGTGATTAGGGGACTTTAATGCGTTTCTCTCCTCTTAGAG  993

seq1  GCCATAGCCACCAAGGTCCTGGCTGCCCTGGCTCTTCTCTCCTGCTTTCC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATAGCCACCAAGGTCCTGGCTGCCCTGGCTCTTCTCTCCTGCTTTCC  1043

seq1  GTAAGTTACGTTTCTTTTGTGTGTGCATGTCTAACCAGTCTTTGAAGATA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTTACGTTTCTTTTGTGTGTGCATGTCTAACCAGTCTTTGAAGATA  1093

seq1  TTCTTCCTAAGCAGAGTTATAGCAGAGACTCTTCTATCATAACCAGAAGA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTAAGCAGAGTTATAGCAGAGACTCTTCTATCATAACCAGAAGA  1143

seq1  AGAATTC  1155
      |||||||
seq2  AGAATTC  1150

seq1: chr7_122118050_122118846
seq2: B6Ng01-120C10.g_68_864

seq1  GAATTCCAGATCCCTTACCTTCATCTATTAATATGTATCACTACAATTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATCCCTTACCTTCATCTATTAATATGTATCACTACAATTCA  50

seq1  AGAAGCGCTTTTGTTTCTGTAACCAAAAAGATTCTTGCAGTGTCTATGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCGCTTTTGTTTCTGTAACCAAAAAGATTCTTGCAGTGTCTATGTG  100

seq1  CATTTTTAAGAATGCTTTTTCTTTTTCAAAAAACATTATTATTTTCTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTAAGAATGCTTTTTCTTTTTCAAAAAACATTATTATTTTCTTAT  150

seq1  TATTTTATGTGTTTGGGTATTTTGTCTGTACACGTGCCTGTATACCACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATGTGTTTGGGTATTTTGTCTGTACACGTGCCTGTATACCACAT  200

seq1  GTGTACCTGGTGCCTATGGAATCCAGAATAGGGTCTTAGATCCCCTGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACCTGGTGCCTATGGAATCCAGAATAGGGTCTTAGATCCCCTGGAA  250

seq1  CTGGAGTTACAGATCATCGTGAGCCAAGGGGTGGCTGCTGGGAATTGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTTACAGATCATCGTGAGCCAAGGGGTGGCTGCTGGGAATTGAAC  300

seq1  CTGGCTTCTCTAGAAGAGAAGGAAGCACTCTTAACTACTACTGCCAAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTCTCTAGAAGAGAAGGAAGCACTCTTAACTACTACTGCCAAGGT  350

seq1  AGCCCAATGTGTATATTTTGGTAGAGGAATGAAAGAGAGTAATTCTAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAATGTGTATATTTTGGTAGAGGAATGAAAGAGAGTAATTCTAGAA  400

seq1  CTTTCTCGGATGGCAGTATAGGGAATCATAGGCCTGTTCCATATTTTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCGGATGGCAGTATAGGGAATCATAGGCCTGTTCCATATTTTCCA  450

seq1  ACAGAGATATCATCTTTGTGTGAAGTTGTGTGGGAAGAAGAGAGAAAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGATATCATCTTTGTGTGAAGTTGTGTGGGAAGAAGAGAGAAAGAT  500

seq1  CTCCCTCTGAAAGCTTCATACTGTCTCTCTGATGTGGTACTCACTGGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCTGAAAGCTTCATACTGTCTCTCTGATGTGGTACTCACTGGACT  550

seq1  GCCCCAGGAGGATATGCGGAGCACTTTTGCTGTATCAGCTCAGAGGCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAGGAGGATATGCGGAGCACTTTTGCTGTATCAGCTCAGAGGCTGC  600

seq1  CACATAATCCAGGCTCATCTTGTAACCTTGAACAGTATTTTTTCAATTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAATCCAGGCTCATCTTGTAACCTTGAACAGTATTTTTTCAATTAA  650

seq1  TTCTGTCTTGGATCTGAGGAAGAAAGTGGAAAGGATAAAGACTATGGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCTTGGATCTGAGGAAGAAAGTGGAAAGGATAAAGACTATGGGAA  700

seq1  TAGAGAATAGAGATGGCGATATAGGGCAGGGAGAAGGACACACACAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAATAGAGATGGCGATATAGGGCAGGGAGAAGGACACACACAAATA  750

seq1  CACAAACAAGAGAGAGAGAGGGAAAGATAGGTAGATGGGGGAGGGGA  797
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACAAGAGAGAGAGAGGGAAAGATAGGTAGATGGGGGAGGGGA  797