BAC Information

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BAC

Clone NameB6Ng01-120E01
Chromosome7 (Build37)
Map Location 138,361,822 - 138,362,758
singlet/doubletsinglet
Overlap gene5430419D17Rik
Upstream geneFgfr2, LOC546005, Ate1, LOC100043163, Nsmce4a, Tacc2, LOC619876, Btbd16, EG434249, Plekha1, Htra1, Dmbt1, 4933402N03Rik
Downstream geneLOC546006, LOC100043173, Cuzd1, 1700007K09Rik, 1700063I17Rik, 2310057M21Rik, Pstk, Ikzf5, Acadsb, Hmx3, Hmx2, Bub3, LOC677073, LOC100043679, Gpr26, Cpxm2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120E01.bB6Ng01-120E01.g
ACCDH924245DH924246
length9401,150
definitionDH924245|Mus musculus domesticus DNA, BAC clone: B6Ng01-120E01, 5' end.DH924246|Mus musculus domesticus DNA, BAC clone: B6Ng01-120E01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacagactctttgatttctttctttactgacccagtagtcattg
agtagagaattgttcagtgtccatgagttgtgagctttctgctgtttctg
ttgttgttgagatcccgctttaatccatggtggtctgataagatacagga
tgttatttccattttcttgtatctatttagacttactttgtgacaaggta
tatagtcagtgttggagaaggttctatgaggtgctgagaacaaggtatat
ccttttgtgtttgggtgaaatgttctgtatatatctgttgggtccatttg
agctataacatctgttccattatttctcagattagtttcttgacagttga
tgacctgtccactgatgagagtggggtgttgaagtcttccactattgatg
tttggggttcaatgtgtgacttaagctttaggtttaaccaatttttgata
gtctattaccatttctaaaagtcacaataaagaagtaatcatttaattgt
tttggaatacaattaaattatatttaattaaatgtgtttaaattaatgtt
tgtaaaggaattgatgaaatttttttaaaaaaaaacctcacttgcagatg
ctaacaagagtatagggagcctcagggaatcccctgttgaatctgatcag
atcctaacatctcacccaagtatttgagatccttataaaggaaatatagc
aacacctgattaatattctgggaattaataaatgtgacacttccttggaa
gcctcacaggctgaggcttctgagacctgagaccaattacaatagaccta
ggtggctactatgtccttggacagacacctctgaatggctgctaaagaga
aagagggaacaactcataaaagagctcatgagaacagagtgagaacagaa
ccaaccatgtgggtgttgttgtttgtggggaatagatttg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagatttatcgaaag
gacccagatgtagctgtctcttgtgagactatgccggggcctagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcacagggctcccaa
tggagagctagagaaagtacccaaggagctaaagggatcttcaccctata
gtggaacaacattatgactaccagtaccctgagctcttgactcttagctg
ctatgttcaagatggcctagtcggcatcactgaaagagaggccatgaaca
cctactttggtgtcccgtacaggacgccagggcaagagggggggagtgtg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_138361822_138362758
seq2: B6Ng01-120E01.b_45_984

seq1  GAATTCTACAGACTCTTTGATTTCTTTCTTTACTGACCCAGTAGTCATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACAGACTCTTTGATTTCTTTCTTTACTGACCCAGTAGTCATTG  50

seq1  AGTAGAGAATTGTTCAGTGTCCATGAGTTGTGAGCTTTCTGCTGTTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGAATTGTTCAGTGTCCATGAGTTGTGAGCTTTCTGCTGTTTCTG  100

seq1  TTGTTGTTGAGATCCCGCTTTAATCCATGGTGGTCTGATAAGATACAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTGAGATCCCGCTTTAATCCATGGTGGTCTGATAAGATACAGGA  150

seq1  TGTTATTTCCATTTTCTTGTATCTATTTAGACTTACTTTGTGACAAGGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTTCCATTTTCTTGTATCTATTTAGACTTACTTTGTGACAAGGTA  200

seq1  TATAGTCAGTGTTGGAGAAGGTTCTATGAGGTGCTGAGAACAAGGTATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTCAGTGTTGGAGAAGGTTCTATGAGGTGCTGAGAACAAGGTATAT  250

seq1  CCTTTTGTGTTTGGGTGAAATGTTCTGTATATATCTGTTGGGTCCATTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTGTGTTTGGGTGAAATGTTCTGTATATATCTGTTGGGTCCATTTG  300

seq1  AGCTATAACATCTGTTCCATTATTTCTCAGATTAGTTTCTTGACAGTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATAACATCTGTTCCATTATTTCTCAGATTAGTTTCTTGACAGTTGA  350

seq1  TGACCTGTCCACTGATGAGAGTGGGGTGTTGAAGTCTTCCACTATTGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTGTCCACTGATGAGAGTGGGGTGTTGAAGTCTTCCACTATTGATG  400

seq1  TTTGGGGTTCAATGTGTGACTTAAGCTTTAGGTTTAACCAATTTTTGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGTTCAATGTGTGACTTAAGCTTTAGGTTTAACCAATTTTTGATA  450

seq1  GTCTATTACCATTTCTAAAAGTCACAATAAAGAAGTAATCATTTAATTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATTACCATTTCTAAAAGTCACAATAAAGAAGTAATCATTTAATTGT  500

seq1  TTTGGAATACAATTAAATTATATTTAATTAAATGTGTTTAAATTAATGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAATACAATTAAATTATATTTAATTAAATGTGTTTAAATTAATGTT  550

seq1  TGTAAAGGAATTGATGAAATTTTTTTAAAAAAAAACCTCACTTGCAGATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGGAATTGATGAAATTTTTTTAAAAAAAAACCTCACTTGCAGATG  600

seq1  CTAACAAGAGTATAGGGAGCCTCAGGGAATCCCCTGTTGAATCTGATCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAAGAGTATAGGGAGCCTCAGGGAATCCCCTGTTGAATCTGATCAG  650

seq1  ATCCTAACATCTCACCCAAGTATTTGAGATCCTTATAAAGGAAATATAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAACATCTCACCCAAGTATTTGAGATCCTTATAAAGGAAATATAGC  700

seq1  AACACCTGATTAATATTCTGGGAATTAATAAATGTGACACTTCCTTGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCTGATTAATATTCTGGGAATTAATAAATGTGACACTTCCTTGGAA  750

seq1  GCCTCACAGGCTGAGGCTTCTGAGACCTGAGACCAATTACAATAGACCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCACAGGCTGAGGCTTCTGAGACCTGAGACCAATTACAATAGACCTA  800

seq1  GGTGGCTACTATGTCCTTGGACAGACACCTCTGAATTGCTGCTAAAAGAG  850
      |||||||||||||||||||||||||||||||||||| |||||| ||||||
seq2  GGTGGCTACTATGTCCTTGGACAGACACCTCTGAATGGCTGCT-AAAGAG  849

seq1  AAAGAGGGAACAACTCATAAAAGAGCTCATGAGAACAGAGTGAG-ACAGA  899
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAAGAGGGAACAACTCATAAAAGAGCTCATGAGAACAGAGTGAGAACAGA  899

seq1  ACCAACCATG-GGGTGTTG-TGTTTGTGGGG-ATAGATTTG  937
      |||||||||| |||||||| ||||||||||| |||||||||
seq2  ACCAACCATGTGGGTGTTGTTGTTTGTGGGGAATAGATTTG  940