BAC Information

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BAC

Clone NameB6Ng01-120H04
Chromosome7 (Build37)
Map Location 9,263,296 - 9,263,880
singlet/doubletsinglet
Overlap geneLOC100042781
Upstream geneLOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039
Downstream geneLOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803, LOC665598, LOC100042810, LOC665593, EG665582, EG434113, EG665577, LOC665571, LOC100042083, Gm1961, V2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105, LOC100042859, LOC100042113, LOC100042120, LOC100042126, LOC100042139
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120H04.bB6Ng01-120H04.g
ACCDH924391DH924392
length1,246563
definitionDH924391|Mus musculus domesticus DNA, BAC clone: B6Ng01-120H04, 5' end.DH924392|Mus musculus domesticus DNA, BAC clone: B6Ng01-120H04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaagaaaaccaaatggatgaaaagcacgtaaaaaaatg
ttcaacatccttaatcaccagggaaatgcaaatcaaaataaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacacc
agatgctggcgaggatgtggtaaaagaggaacactcttccattgctggtg
ggattgagagctgatacaaccactctggaaatcagtctggtagttcctca
gaaaattcgcagacatagtgctatcagaggatccatcaatacctcccctg
ggcatttacccagaagactttccaacttgtaataaggaaacatgctccac
tatgttcatagcagccttatttataatagcattggatttaggattggtaa
agatctttacccaatctttttttttttttgctgttttgtcttactgacat
actttgcctaacacatgctttgcaattttatgagattaattctcaatctt
atagcacaaaccatttctgttgttcaggattttccccctgtgcaaatatc
tttgagactcttctctactttctcctctataaggtcattgtctctgattt
catgtgtagttccttgatccacttagacttgatttttgtacaaagagata
aaaatggattaattcacattcttctacatgacaactgccagttgtaccag
tgccatttgttcaaaatgatgtcttattttcactggatgattgtagctcc
tttgttaaagattaagtgaccatagatgtgtgagttcatttctgtgcctt
caattctattccactgatctatctgtctgtcgctgtaccagtaccatgca
gtttttcatcacatttgctctgtagtacagcttgaggtcactcatggtga
ttccaacagaggttcttttatagttgaaagtagttttatctatcatcatt
tttggtgttttgttttgttttgttattccagatgaatttgcaattgccct
ttctaactctgaagatgagttgactgatgtttattgcatgacctgttaat
gctatgacaagaatggccattttagtttatcatctgcatcatgacatgga
agatctccatcttctgaaacatctgattatcttccatacctgagttctat
catgcgatttgagtcttaaggaagtacgaagatttattatatttggaaat
tttgaagtttttgcctacttttttctctgagctgcattatactctt
gaattctttctatatttttgatattgttgaaaagggtgttacactttccc
atcaaagatcagagtatatttcccccggccatcattttctttttctcttt
ctttctttctttctttctttctttctttctttctttctttctttctttct
ttctttctttcttccttccttccttccttccttccttccttccttccttt
cttcctttctatctttcttcctttcttcctttctctcttcctttaccttt
ccctctttctctctctctctctctctctctctctctctctctctctctcc
ctttcttccttccttccttccttccttccttccttccttcctttccttct
tttttttttttttttttttttttttgagacggggtttctctgtatagccc
tggctgttctggaacttactttgtagaccaggctagcctcgaactcagaa
tctgcctgcctctgcctctcagtgctggataagtgtgtgccacatgctgg
ctccatcattcttactgtatatatccttgttatattgaagaatattgtgt
agagtatgatgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_9263296_9263880
seq2: B6Ng01-120H04.g_66_628 (reverse)

seq1  GACATTCCATACTCTAACACAAAATATTCTTTCAAATATAACAAAGGGAT  50
      |||||  ||||||||   ||| |||||||||   ||||||||||  ||||
seq2  GACAT--CATACTCT---ACACAATATTCTT--CAATATAACAA--GGAT  41

seq1  AATATACAGTTAAAGAAAATGATGGGAGCCAGGCATGTTGGCACACACCT  100
       |||||||||  |||  |||||| ||||||| ||||| |||||||||| |
seq2  -ATATACAGT--AAG--AATGAT-GGAGCCA-GCATG-TGGCACACACTT  83

seq1  TTAATCCCAGCACTTGAGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGG  150
       |    ||||||| ||||||||||||||||||||| ||||||||||||||
seq2  AT----CCAGCAC-TGAGAGGCAGAGGCAGGCAGA-TTCTGAGTTCGAGG  127

seq1  CTAGCCTGGTCTACAAAGTAAGTTCCAGAACAGCCAGGGCTATACAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCTGGTCTACAAAGTAAGTTCCAGAACAGCCAGGGCTATACAGAGA  177

seq1  AACCCCGTCTC-AAAAAAAAAAAAAAAAAAAAAAAAAGAAGGAAAGGAAG  249
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AACCCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGGAAAGGAAG  227

seq1  GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGGGAGAGAGAGAGAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGGGAGAGAGAGAGAG  277

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGGGAAAGGTAAAGGAAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGGGAAAGGTAAAGGAAG  327

seq1  AGAGAAAGGAAGAAAGGAAGAAAGATAGAAAGGAAGAAAGGAAGGAAGGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAGGAAGAAAGGAAGAAAGATAGAAAGGAAGAAAGGAAGGAAGGA  377

seq1  AGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAG  427

seq1  AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAAAGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAAAGAA  477

seq1  AATGATGGCCGGGGGAAATATACTCTGATCTTTGATGGGAAAGTGTAACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGGCCGGGGGAAATATACTCTGATCTTTGATGGGAAAGTGTAACA  527

seq1  CCCTTTTCAACAATATCAAAAATATAGAAAGAATTC  585
      ||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTCAACAATATCAAAAATATAGAAAGAATTC  563