BAC Information

Click to search

BAC

Clone NameB6Ng01-120O01
Chromosome7 (Build37)
Map Location 67,010,224 - 67,134,440
singlet/doubletdoublet
Overlap geneLOC664788, Snrpn, Snurf
Upstream geneAtp10a, LOC621446, LOC668811, LOC668813, LOC668815, EG668818, Ube3a, LOC100040985, LOC100041010, LOC100041029, LOC100041051, Pwcr1
Downstream geneEG664849, LOC100041201, LOC100041211, LOC664896, LOC100041229
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120O01.bB6Ng01-120O01.g
ACCDH924706DH924707
length5431,044
definitionDH924706|Mus musculus domesticus DNA, BAC clone: B6Ng01-120O01, 5' end.DH924707|Mus musculus domesticus DNA, BAC clone: B6Ng01-120O01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,010,224 - 67,010,769)(67,133,391 - 67,134,440)
sequence
tgggaagcaggcttcattttcacagctgaaaggaacccccctctctctcc
ctctctctgtgttaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtcttttaccccgagacattccttgc
tgtggcagccagtccctatttctgtccacctgtccagtgctcattttgtc
tgttgtgaagacttccacctctctcatgagattgcttttggccatccacc
cctgctttgatctcttctggtgaaaagttctcaggctatactgctcagct
tctcacactaatgaaaatcccattgtgcagaactatcacaggccaggatc
cgacttgactcaagttatcttagtgtgtcaaatgcaatctgcatccaaga
acttattttctccctgatgattcccatgagtatggctctcaaggtggatt
tgcaaaacacaatgtgccctgttgaaacctccttcctatgcacactatca
acttgtctttccataagagttaggccaataacatcgaaaataa
gaattcttcctcagcattatgtatacttttactgtaactatatgtcagtt
ttcagcttttgtagtttgtgctcttcaatgacacactcattgatttgtgg
aggaaggttattcatcgtgactttaagaggggccaaaagtagagatagtg
ataaattttgggaactgaaaaatgtgggtgttttatatatatattattta
aaatattctaatattataaagataaatatttaatgtgaagatggccagta
taagtgttctccttccaagaaagaggatctaattttataagcaattgtat
aaaaacctggtaataatgttttgagatgtctcagtgggttctgtagaaga
ctccctttctagcattcacatggaggctcataactagctataacttaaat
tctaagggatttgatacctttttttaaaaccttgagaacaaagaacatac
ataatacaaggataagtgtgcagacaaaacacataaaattataggtgaca
tctgtgaatcactgctgagtggctagggaggtggatttctcaaacttaaa
acatattctctgatcacatgttcgtcacaaaggaaggtagcacttctatt
tgacctataaatacacccagaaacaaacccagaaaccttaccaatactgg
tggcaatgggtttcagagatctgttgggtagaagtagtgctaagaaggag
gactggaactgttcattgttggacgcgcaatcagtctctaatatactgtt
tgaaaatggttgatttttaagccatggattgaggtagaaatgtgttttcc
tctgcaggacccatcctctgtctgtgaaactttggtcaagcttacattgt
ttgttaatagcctgcatcgaacctttatttatatcccttccccgagtatt
aaggatcttgaaattttattgttgacacggctattgtggaacagcaatca
tggttagttgtacattttattaagcgaagggttgatagctatttaatgac
ccccatcatagttcccaatgtatgggtttttatttcgggtaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_67010224_67010769
seq2: B6Ng01-120O01.b_60_602

seq1  TGGGAAGCAGGCTTCATTTTCACAGCTGAAAGGAACCCCCCTCTCTCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGCAGGCTTCATTTTCACAGCTGAAAGGAACCCCCCTCTCTCTCC  50

seq1  CTCTCTCTGTGTTAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  100
      |||||||||||||||    |||||||||||||||||||||||||||||||
seq2  CTCTCTCTGTGTTAA----TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  96

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTTTACCCTGAGACATTCC  150
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTTTACCCCGAGACATTCC  146

seq1  TTGCTGTGGCAGCCAGTCCCTATTTCTGTCCACCTGTCCAGTGCTCATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTGGCAGCCAGTCCCTATTTCTGTCCACCTGTCCAGTGCTCATTT  196

seq1  TGTCTGTTGTGAAGACTTCCACCTCTCTCATGAGATTGCTTTTGGCCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTTGTGAAGACTTCCACCTCTCTCATGAGATTGCTTTTGGCCATC  246

seq1  CACCCCTGCTTTGATCTCTTCTGGTGAAAAGTTCTCAGGCTATACTGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCTGCTTTGATCTCTTCTGGTGAAAAGTTCTCAGGCTATACTGCTC  296

seq1  AGCTTCTCACACTAATGAAAATCCCATTGTGCAGAACTATCACAGGCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTCACACTAATGAAAATCCCATTGTGCAGAACTATCACAGGCCAG  346

seq1  GATCCGACTTGACTCAAGTTATCTTAGTGTGTCAAATGCAGTCTGCATCC  400
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GATCCGACTTGACTCAAGTTATCTTAGTGTGTCAAATGCAATCTGCATCC  396

seq1  AAGAACTTATTTTCTCCCTGATGATTCCCATGAGCATGGCTCTCAAGGTG  450
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAGAACTTATTTTCTCCCTGATGATTCCCATGAGTATGGCTCTCAAGGTG  446

seq1  GATTTGCAAAACACAATGTGCCCTGTTGAAACCTCCTTCCTATGCACACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGCAAAACACAATGTGCCCTGTTGAAACCTCCTTCCTATGCACACT  496

seq1  AGCAACTTGTCTTTCCAGAAGAGTTAGGCCAA-AACATCGAAAAGAA  546
      | ||||||||||||||| |||||||||||||| ||||||||||| ||
seq2  ATCAACTTGTCTTTCCATAAGAGTTAGGCCAATAACATCGAAAATAA  543

seq1: chr7_67133391_67134440
seq2: B6Ng01-120O01.g_67_1110 (reverse)

seq1  TTTTA-CCGAAATAAAAAACCCCATACATTGAGAAACTATGATGTGGGGT  49
      ||||| ||||||||||||  ||||||||||| | |||||||||| |||||
seq2  TTTTACCCGAAATAAAAA--CCCATACATTG-GGAACTATGATG-GGGGT  46

seq1  CATTAAATTAGCTATCCAACCCTTCGCTTAATTAAATGTACAACTTACCA  99
      ||||||| ||||||| |||||||||||||||| |||||||||||| ||||
seq2  CATTAAA-TAGCTAT-CAACCCTTCGCTTAATAAAATGTACAACTAACCA  94

seq1  TGATTGCTGTTCCACAATAGCCGTTGTCAACACTAAAATTTCAAGATCCT  149
      ||||||||||||||||||||||| |||||||| |||||||||||||||||
seq2  TGATTGCTGTTCCACAATAGCCG-TGTCAACAATAAAATTTCAAGATCCT  143

seq1  TAATACTCGGGGAAGGGATATAAATAAAGGTTCGATGCAGGCTATTAACA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTCGGGGAAGGGATATAAATAAAGGTTCGATGCAGGCTATTAACA  193

seq1  AACAATGTAAGCTTGACCAAAGTTTCACAGACAGAGGATGGGTCCTGCAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGTAAGCTTGACCAAAGTTTCACAGACAGAGGATGGGTCCTGCAG  243

seq1  AGGAAAACACATTTCTACCTCAATCCATGGCTTAAAAATCAACCATTTTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAACACATTTCTACCTCAATCCATGGCTTAAAAATCAACCATTTTC  293

seq1  AAACAGTATATTAGAGACTGATTGCGCGTCCAACAATGAACAGTTCCAGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTATATTAGAGACTGATTGCGCGTCCAACAATGAACAGTTCCAGT  343

seq1  CCTCCTTCTTAGCACTACTTCTACCCAACAGATCTCTGAAACCCATTGCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTCTTAGCACTACTTCTACCCAACAGATCTCTGAAACCCATTGCC  393

seq1  ACCAGTATTGGTAAGGTTTCTGGGTTTGTTTCTGGGTGTATTTATAGGTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTATTGGTAAGGTTTCTGGGTTTGTTTCTGGGTGTATTTATAGGTC  443

seq1  AAATAGAAGTGCTACCTTCCTTTGTGACGAACATGTGATCAGAGAATATG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAAGTGCTACCTTCCTTTGTGACGAACATGTGATCAGAGAATATG  493

seq1  TTTTAAGTTTGAGAAATCCACCTCCCTAGCCACTCAGCAGTGATTCACAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGTTTGAGAAATCCACCTCCCTAGCCACTCAGCAGTGATTCACAG  543

seq1  ATGTCACCTATAATTTTATGTGTTTTGTCTGCACACTTATCCTTGTATTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACCTATAATTTTATGTGTTTTGTCTGCACACTTATCCTTGTATTA  593

seq1  TGTATGTTCTTTGTTCTCAAGGTTTTAAAAAAAGGTATCAAATCCCTTAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTTCTTTGTTCTCAAGGTTTTAAAAAAAGGTATCAAATCCCTTAG  643

seq1  AATTTAAGTTATAGCTAGTTATGAGCCTCCATGTGAATGCTAGAAAGGGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAGTTATAGCTAGTTATGAGCCTCCATGTGAATGCTAGAAAGGGA  693

seq1  GTCTTCTACAGAACCCACTGAGACATCTCAAAACATTATTACCAGGTTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTACAGAACCCACTGAGACATCTCAAAACATTATTACCAGGTTTT  743

seq1  TATACAATTGCTTATAAAATTAGATCCTCTTTCTTGGAAGGAGAACACTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAATTGCTTATAAAATTAGATCCTCTTTCTTGGAAGGAGAACACTT  793

seq1  ATACTGGCCATCTTCACATTAAATATTTATCTTTATAATATTAGAATATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGGCCATCTTCACATTAAATATTTATCTTTATAATATTAGAATATT  843

seq1  TTAAATAATATATATATAAAACACCCACATTTTTCAGTTCCCAAAATTTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAATATATATATAAAACACCCACATTTTTCAGTTCCCAAAATTTA  893

seq1  TCACTATCTCTACTTTTGGCCCCTCTTAAAGTCACGATGAATAACCTTCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATCTCTACTTTTGGCCCCTCTTAAAGTCACGATGAATAACCTTCC  943

seq1  TCCACAAATCAATGAGTGTGTCATTGAAGAGCACAAACTACAAAAGCTGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAAATCAATGAGTGTGTCATTGAAGAGCACAAACTACAAAAGCTGA  993

seq1  AAACTGACATATAGTTACAGTAAAAGTATACATAATGCTGAGGAAGAATT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGACATATAGTTACAGTAAAAGTATACATAATGCTGAGGAAGAATT  1043

seq1  C  1050
      |
seq2  C  1044