BAC Information

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BAC

Clone NameB6Ng01-121L17
Chromosome7 (Build37)
Map Location 71,925,137 - 71,926,159
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665083, Klf13, E030018B13Rik, Trpm1, BB128963, Mtmr15, LOC100041582, Mphosph10, Mcee, Apba2, 5730507A09Rik
Downstream geneNdnl2, Tjp1, Gm1693, EG665234, Tarsl2, Tm2d3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121L17.bB6Ng01-121L17.g
ACCDH925342DH925343
length1,1381,018
definitionDH925342|Mus musculus domesticus DNA, BAC clone: B6Ng01-121L17, 5' end.DH925343|Mus musculus domesticus DNA, BAC clone: B6Ng01-121L17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagaaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaatgaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaagttcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaaggagttacagagacggagtttggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaacactgacaccattgcatacactagcaagattttatgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtgatgctcacagtcagctaatgatggatcataggctccatgga
ggagctaagaaagtagcagagctaagggatctgcacctatagtggaacac
ttatgagctacagaacccggagctctgactctagctgcaatatatccaaa
atggctatcgctactggaagagagcatgacttgcactttatgcctgatca
ggaatacaggcaatagggaagtgggtgctagtgatgag
gaattctaagtacccacatcttccttataatttaaatgcgtgttggggat
aattagctgcagttagaactaacatcatgaatgcctgagacagcaagcgt
tactcctgttgtcagaaccactgaagcccagacactctaacgtgcagaaa
tattagctgcctgatgatacaattccgttttttgacatagctcagtagag
atggcgtttgttttttttacctcctaagtgtctccagtgtcgtttctggt
tttgtttgtaaaagtaatttcgtccccctccccccacccccgtttccctc
agagccaccttcgcctcagaggcatcctcagctgttacatagcttagttt
gtcacagtcatctcataggattgctctgtgttctcacctctgctcacagg
gttcattaagtagaaccccctaggaaagggcaggtgggtgttcgctttgc
ataggcctaataagtgtgagcatggaactagaaggtgcgtgggactctca
aggtcataccccacccgcaggagtttgctatccagagagagccagagtgc
caaaggaaagctggggacagcctctgttcctgggggtggggggagctgga
aggcagtgctgaacaggcgccaggcaaatcccaccaggagacatccagac
ttttgccgaccaaccccgctcttcaccttgttccctgcagcagatcagac
atggagacaccagacagagctagagactatgacagaggcttccgtttgag
ccttttgatgctgctgagtgaatctgggacagaggatggcatttcatatt
acaatcctgggtagctccagcaaagggagcctgagactgataggtcagta
aagtgccaaaagtcatgtggtgctcagcggttggccagtgtctgtagacc
aggcatttgactcatagtttgaggtcaataaccttctcatggtctctcca
gtctatagagctaggctgggtgggccgagcttaatttagagccttgtgtt
gtaaggctttggaagctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_71925137_71926159
seq2: B6Ng01-121L17.g_67_1084 (reverse)

seq1  CAGCTTCCAAAGGCCTACAACACAAAGCTCCTAAATTTAGGCTCGGCCCA  50
      |||||||||||| | |||||||||| ||| ||||| ||| ||||||||||
seq2  CAGCTTCCAAAGCCTTACAACACAAGGCT-CTAAA-TTAAGCTCGGCCCA  48

seq1  CACAGCCTAGCTTCTATAGACTGGAGGAGACCATGAAGAGGTTAATGGAC  100
      | ||||||||| ||||||||||||| ||||||||||  ||||| || |||
seq2  CCCAGCCTAGC-TCTATAGACTGGA-GAGACCATGAGAAGGTT-ATTGAC  95

seq1  CTCAAACTATGAGTCAAATGCCTGGTCTACAGACACTGGCCAACCGCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACTATGAGTCAAATGCCTGGTCTACAGACACTGGCCAACCGCTGA  145

seq1  GCACCACATGACTTTGGGCACTTTACTGACCTATCAGTCTCAGGCTCCCT  200
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GCACCACATGACTTTTGGCACTTTACTGACCTATCAGTCTCAGGCTCCCT  195

seq1  TTGCTTGGAGCTA-CCAGGATTGTAATATGAAATGCCATCCTCTGTCACA  249
      |||| |||||||| ||||||||||||||||||||||||||||||||| ||
seq2  TTGC-TGGAGCTACCCAGGATTGTAATATGAAATGCCATCCTCTGTCCCA  244

seq1  GATTCACTCAGCAGCATCAAAAGGCTCAAACGGAAGCCTCTGTCATAGTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCACTCAGCAGCATCAAAAGGCTCAAACGGAAGCCTCTGTCATAGTC  294

seq1  TCTAGCTCTGTCTGGTGTCTCCATGTCTGATCTGCTGCAGGGAACAAGGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTCTGTCTGGTGTCTCCATGTCTGATCTGCTGCAGGGAACAAGGT  344

seq1  GAAGAGCGGGGTTGGTCGGCAAAAGTCTGGATGTCTCCTGGTGGGATTTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGCGGGGTTGGTCGGCAAAAGTCTGGATGTCTCCTGGTGGGATTTG  394

seq1  CCTGGCGCCTGTTCAGCACTGCCTTCCAGCTCCCCCCACCCCCAGGAACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCGCCTGTTCAGCACTGCCTTCCAGCTCCCCCCACCCCCAGGAACA  444

seq1  GAGGCTGTCCCCAGCTTTCCTTTGGCACTCTGGCTCTCTCTGGATAGCAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGTCCCCAGCTTTCCTTTGGCACTCTGGCTCTCTCTGGATAGCAA  494

seq1  ACTCCTGCGGGTGGGGTATGACCTTGAGAGTCCCACGCACCTTCTAGTTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTGCGGGTGGGGTATGACCTTGAGAGTCCCACGCACCTTCTAGTTC  544

seq1  CATGCTCACACTTATTAGGCCTATGCAAAGCGAACACCCACCTGCCCTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTCACACTTATTAGGCCTATGCAAAGCGAACACCCACCTGCCCTTT  594

seq1  CCTAGGGGGTTCTACTTAATGAACCCTGTGAGCAGAGGTGAGAACACAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGGGGTTCTACTTAATGAACCCTGTGAGCAGAGGTGAGAACACAGA  644

seq1  GCAATCCTATGAGATGACTGTGACAAACTAAGCTATGTAACAGCTGAGGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCCTATGAGATGACTGTGACAAACTAAGCTATGTAACAGCTGAGGA  694

seq1  TGCCTCTGAGGCGAAGGTGGCTCTGAGGGAAACGGGGGTGGGGGGAGGGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTGAGGCGAAGGTGGCTCTGAGGGAAACGGGGGTGGGGGGAGGGG  744

seq1  GACGAAATTACTTTTACAAACAAAACCAGAAACGACACTGGAGACACTTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGAAATTACTTTTACAAACAAAACCAGAAACGACACTGGAGACACTTA  794

seq1  GGAGGTAAAAAAAACAAACGCCATCTCTACTGAGCTATGTCAAAAAACGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTAAAAAAAACAAACGCCATCTCTACTGAGCTATGTCAAAAAACGG  844

seq1  AATTGTATCATCAGGCAGCTAATATTTCTGCACGTTAGAGTGTCTGGGCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTATCATCAGGCAGCTAATATTTCTGCACGTTAGAGTGTCTGGGCT  894

seq1  TCAGTGGTTCTGACAACAGGAGTAACGCTTGCTGTCTCAGGCATTCATGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGTTCTGACAACAGGAGTAACGCTTGCTGTCTCAGGCATTCATGA  944

seq1  TGTTAGTTCTAACTGCAGCTAATTATCCCCAACACGCATTTAAATTATAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGTTCTAACTGCAGCTAATTATCCCCAACACGCATTTAAATTATAA  994

seq1  GGAAGATGTGGGTACTTAGAATTC  1023
      ||||||||||||||||||||||||
seq2  GGAAGATGTGGGTACTTAGAATTC  1018