BAC Information

Click to search

BAC

Clone NameB6Ng01-122C19
Chromosome7 (Build37)
Map Location 74,658,367 - 74,815,853
singlet/doubletdoublet
Overlap geneLrrc28, Ttc23
Upstream geneAsb7, Lins2, Lass3, Adamts17, Lysmd4, Mef2a, EG665304
Downstream geneDmn, LOC665319, LOC100041771, Igf1r, C330024D12Rik, EG434197, LOC100041800, EG384639
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122C19.bB6Ng01-122C19.g
ACCDH925670DH925671
length5031,102
definitionDH925670|Mus musculus domesticus DNA, BAC clone: B6Ng01-122C19, 5' end.DH925671|Mus musculus domesticus DNA, BAC clone: B6Ng01-122C19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,815,345 - 74,815,853)(74,658,367 - 74,659,490)
sequence
ctaggttatgaagaataccatagacaaaattaagggcaatagataaaaga
aaatataagtgacataattcacatgcagaacacataagaaaatctcaatt
attagtaggaaaagcacagagaagtccaaaagaagaataagatagaactt
aacaccctatttgtagaaggagaatcccaaatggctcacaagtatgcagc
agtattcaattaatttgataaggaaagtaaatggaatttaaaaataattg
ggtacttaattcagggcagctaattagaaaagagttacagtgccaaacac
tgttggctgtaacaagataggaccccatccatcctgcgagaggcagagct
gtgtgcagcaatggggaacgtgcagtgtgctgctctcctgtaacctaggt
gtcccatcccaggggtggaacctcagaaaaactctcctctgtgtcagcaa
agcttcctgggatggatggcgatgatgcggtggaaggggaggagagggga
aga
gaattcctgagtatcagggtgacatttcatagctccacttaagacataag
atggtcgagggcaaaacacagatgcagccctgtgtttccctgtcgttcaa
ttaagtcaagcacggatgtgaagtgtcaggccacattttcctgccttcag
cttatatacatgtcggggttgtgctgaaacttccattcttccgaaaggat
gaaagaagagatacacttgatccagacgctcagctcctattatactgtag
gcctttgaaatattaaggctgaacagagcaagttgtgaaagggacgggag
gaagtagggacagtggccacacatggcatgcatggccgctttctgcctct
gccattacttggaagagtctgcttttcaggcagcaggtggtgtgactgca
aagagatcacacacttgtcagtaactatgtaggatttttggcactgttag
agcctagaattacagtcaggctggctaacaaaatgtcaccaaccaaagtt
ttgggaaatagctttcccaccaagcaagccttcttgattcccctttcagt
cttgtcttacataaatcataccagtaaacagagaacttttaccccccccc
caaagcagcccaacgaacacctgaaagtaaaacagattatggtggcatcc
tttcagaggaagagccaatcagctgtccccccagagagctcatctctctg
gcaagggaaagctcatgggatttttgcaaaggtgggatgtggacccgttc
attccttctgtttccctagggagaagtcagaggaaaatgaaggcaatttc
atgtaccgggttaataccactaagccccatccacagcagagcatcagatg
cctcaaacttcccattattaggaaattcttagccaaaaaaaaaaaaaaaa
attcaaacttctttttctatagtagtttagaacaaaagtatattaattgg
tgtctacattttgtttttaatccctctcaaaaaatgtcttctagtgcaaa
cttagaataagacagaagtttcagaggcgtgtgctctggagcagctgtgc
tttgcaggactagctgctcagtcgggcactgctgctatgctggctgcgtg
ag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_74815345_74815853
seq2: B6Ng01-122C19.b_45_553 (reverse)

seq1  TCTTCCCCTCTCCTCCCCTTCCACCGCATCATCGCCATCCATCCCAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCCTCTCCTCCCCTTCCACCGCATCATCGCCATCCATCCCAGGAA  50

seq1  GCTTTGCTGACACAGAGGAGAGTTTTTCTGAGGTTCCACCCCTGGGATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGCTGACACAGAGGAGAGTTTTTCTGAGGTTCCACCCCTGGGATGG  100

seq1  GACACCTAGGTTACAGGAGAGCAGCACACTGCACGTTCCCCATTGCTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCTAGGTTACAGGAGAGCAGCACACTGCACGTTCCCCATTGCTGCA  150

seq1  CACAGCTCTGCCTCTCGCAGGATGGATGGGGTCCTATCTTGTTACAGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCTCTGCCTCTCGCAGGATGGATGGGGTCCTATCTTGTTACAGCCA  200

seq1  ACAGTGTTTGGCACTGTAACTCTTTTCTAATTAGCTGCCCTGAATTAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTTTGGCACTGTAACTCTTTTCTAATTAGCTGCCCTGAATTAAGT  250

seq1  ACCCAATTATTTTTAAATTCCATTTACTTTCCTTATCAAATTAATTGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAATTATTTTTAAATTCCATTTACTTTCCTTATCAAATTAATTGAAT  300

seq1  ACTGCTGCATACTTGTGAGCCATTTGGGATTCTCCTTCTACAAATAGGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTGCATACTTGTGAGCCATTTGGGATTCTCCTTCTACAAATAGGGT  350

seq1  GTTAAGTTCTATCTTATTCTTCTTTTGGACTTCTCTGTGCTTTTCCTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGTTCTATCTTATTCTTCTTTTGGACTTCTCTGTGCTTTTCCTACT  400

seq1  AATAATTGAGATTTTCTTATGTGTTCTGCATGTGAATTATGTCACTTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTGAGATTTTCTTATGTGTTCTGCATGTGAATTATGTCACTTATA  450

seq1  TTTTCTTTTATCTATTGCCCTTAATTTTGTCTATGGTATTCTTCATAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTATCTATTGCCCTTAATTTTGTCTATGGTATTCTTCATAACC  500

seq1  TAGGAATTC  509
      |||||||||
seq2  TAGGAATTC  509

seq1: chr7_74658367_74659490
seq2: B6Ng01-122C19.g_67_1168

seq1  GAATTCCTGAGTATCAGGGTGACATTTCATAGCTCCACTTAAGACATAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAGTATCAGGGTGACATTTCATAGCTCCACTTAAGACATAAG  50

seq1  ATGGTCGAGGGCAAAACACAGATGCAGCCCTGTGTTTCCCTGTCGTTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCGAGGGCAAAACACAGATGCAGCCCTGTGTTTCCCTGTCGTTCAA  100

seq1  TTAAGTCAAGCACGGATGTGAAGTGTCAGGCCACATTTTCCTGCCTTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTCAAGCACGGATGTGAAGTGTCAGGCCACATTTTCCTGCCTTCAG  150

seq1  CTTATATACATGTCGGGGTTGTGCTGAAACTTCCATTCTTCCGAAAGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATACATGTCGGGGTTGTGCTGAAACTTCCATTCTTCCGAAAGGAT  200

seq1  GAAAGAAGAGATACACTTGATCCAGACGCTCAGCTCCTATTATACTGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAGAGATACACTTGATCCAGACGCTCAGCTCCTATTATACTGTAG  250

seq1  GCCTTTGAAATATTAAGGCTGAACAGAGCAAGTTGTGAAAGGGACGGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTGAAATATTAAGGCTGAACAGAGCAAGTTGTGAAAGGGACGGGAG  300

seq1  GAAGTAGGGACAGTGGCCACACATGGCATGCATGGCCGCTTTCTGCCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAGGGACAGTGGCCACACATGGCATGCATGGCCGCTTTCTGCCTCT  350

seq1  GCCATTACTTGGAAGAGTCTGCTTTTCAGGCAGCAGGTGGTGTGACTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTACTTGGAAGAGTCTGCTTTTCAGGCAGCAGGTGGTGTGACTGCA  400

seq1  AAGAGATCACACACTTGTCAGTAACTATGTAGGATTTTTGGCACTGTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATCACACACTTGTCAGTAACTATGTAGGATTTTTGGCACTGTTAG  450

seq1  AGCCTAGAATTACAGTCAGGCTGGCTAACAAAATGTCACCAACCAAAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAGAATTACAGTCAGGCTGGCTAACAAAATGTCACCAACCAAAGTT  500

seq1  TTGGGAAATAGCTTTCCCACCAAGCAAGCCTTCTTGATTCCCCTTTCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAAATAGCTTTCCCACCAAGCAAGCCTTCTTGATTCCCCTTTCAGT  550

seq1  CTTGTCTTACATAAATCATACCAGTAAACAGAGAACTTTTACCCCCCCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTTACATAAATCATACCAGTAAACAGAGAACTTTTACCCCCCCCC  600

seq1  CAAAGCAGCCCAACGAACACCTGAAAGTAAAACAGATTATGGTGGCATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCAGCCCAACGAACACCTGAAAGTAAAACAGATTATGGTGGCATCC  650

seq1  TTTCAGAGGAAGAGCCAATCAGCTGTCCCCCCAGAGAGCTCATCTCTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGAGGAAGAGCCAATCAGCTGTCCCCCCAGAGAGCTCATCTCTCTG  700

seq1  GCAAGGGAAAGCTCATGGGATTTTTGCAAAGGTGGGATGTGGACCCGTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGGAAAGCTCATGGGATTTTTGCAAAGGTGGGATGTGGACCCGTTC  750

seq1  ATTCCTTCTGTTTCCCTAGGGAGAAGTCAGAGGAAAATGAAGGCAATTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTCTGTTTCCCTAGGGAGAAGTCAGAGGAAAATGAAGGCAATTTC  800

seq1  ATGTACCGGGTAAATACCACTAAGCCCCATCCACAGCAGAGCATCAGATG  850
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATGTACCGGGTTAATACCACTAAGCCCCATCCACAGCAGAGCATCAGATG  850

seq1  CCTCAAACTTCCCAATTATAGGAAAATCTTAGCAAAAAAAAAAAAAAAAA  900
      |||||||||||||| |  ||||||| |||||||  |||||||||||||||
seq2  CCTCAAACTTCCCATTATTAGGAAATTCTTAGC-CAAAAAAAAAAAAAAA  899

seq1  AATTCAAAACTTCTTTTTCTATAGTAGTTTAGAACAAAAGTATATTTAAT  950
      ||||| |||||||||||||||||||||||||||||||||||||| |||||
seq2  AATTC-AAACTTCTTTTTCTATAGTAGTTTAGAACAAAAGTATA-TTAAT  947

seq1  TTGTGTCTACATTTTTGTTTTTAAATCCCTCTCAAAAAATGTCTTCCTAG  1000
      | ||||||||| |||||||||| |||||||||||||||||||||| ||||
seq2  TGGTGTCTACA-TTTTGTTTTT-AATCCCTCTCAAAAAATGTCTT-CTAG  994

seq1  GTTGCAAAACTTAGAAATAAGACAGGAAGTTTCCAGAGGGCGTGTGCTCT  1050
        ||| |||||||| ||||||||| ||||||| |||| ||||||||||||
seq2  --TGC-AAACTTAG-AATAAGACA-GAAGTTT-CAGA-GGCGTGTGCTCT  1037

seq1  GGAGCCAGCTGTGCCTCTGCAGGAGCCTAGCTGCTCCAGCCCGGGCACCC  1100
      |||| |||||||| || |||||||  ||||||||| |||  ||||||  |
seq2  GGAG-CAGCTGTG-CTTTGCAGGA--CTAGCTGCT-CAG-TCGGGCA--C  1079

seq1  TGCCCTGCTATGCTGGCTGC-TGAG  1124
      ||  |||||||||||||||| ||||
seq2  TG--CTGCTATGCTGGCTGCGTGAG  1102