BAC Information

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BAC

Clone NameB6Ng01-122D18
Chromosome7 (Build37)
Map Location 50,890,920 - 51,043,076
singlet/doubletdoublet
Overlap geneCeacam18, Siglece, Atpbd3, Klk14, Klk13, Klk12, Klk11, Klk10
Upstream geneC330019L16Rik, EG434179, EG546965, LOC546964, LOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199, LOC100039589, EG668620, Zfp715, Siglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik, A230106M20Rik, 4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301, Zfp719, 4933405K07Rik
Downstream geneKlk9, Klk8, Klk7, Klk6, Klk5, Klk4, Klk2-ps, Klk15, Klk1b7-ps, Klk1b8, Klk1b1, Klk1b9, Klk1b10-ps, Klk1b11, LOC100039713, Klk1b26, Klk1b18-ps, Klk1b27, Klk1b14-ps, Klk1b15-ps, Klk1b21, Klk1b22, Klk1b16, Klk1b24, Klk1b3, Klk1b4, Klk1b5, Klk1, 1700028J19Rik, LOC668661, Acpt, LOC628854, EG638453, Clec11a, Shank1, 1700008O03Rik, Syt3, Lrrc4b, 0610012D14Rik, Josd2, 2310044H10Rik, 1700021P22Rik, Mybpc2, Spib, Pold1, Nr1h2, Napsa, Kcnc3, Myh14, 1700023D19Rik, Zfp473, Vrk3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122D18.bB6Ng01-122D18.g
ACCDH925713DH925714
length710861
definitionDH925713|Mus musculus domesticus DNA, BAC clone: B6Ng01-122D18, 5' end.DH925714|Mus musculus domesticus DNA, BAC clone: B6Ng01-122D18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,042,367 - 51,043,076)(50,890,920 - 50,891,765)
sequence
gaattccagggccccaagggaggcagggagtgtgtcaggtgatccaaggt
caggctggttcctgccaggacaggaagaactggtgttgggtggacccaga
aatgagacctagtgggaggggaagaggaagtggttaaaagacccttctgg
gaggttaggaggaatggagaatctgatttttccatcaggcctgtgggtgg
gctgggggtaaggcaggaaaggaaaatggcagaagagggattctttgctt
caaagtctagctaaagtgtctcactagctgagagtcagggattccagcac
agtcaatcatactgagtttttgtttatttattgttttaaaatcatgtaca
tttgtacatgtctgtagatgggtacacggatgtaagtgcaggtgcctgag
aaagcctgagacatctgacccctcgtgtgctggaaaccaaattcaggttc
ctcttgtaggagcagtgcacactcttaaccactgagccatctctccagct
gtactggctggttttgtgtcaatttgacacaaactagagtcatcatagag
ggaggagcctccgttgagggaacacctccacgagatacagctgtaaggca
tttccttaattagtcattgatggggagggcccagcccactgtgggtgggg
tcatccctgggctggtggtctttgggttctataagagagcaggttgagca
agcagtaagt
gaattcatatctgcagactgtgccagacagtctgagaggggcttccctgc
atttattccccagatagtcatgaaagctatatacccagtgttaactggca
cagccaagccctgcctgcctggacctcacaggtctgccctcaaactaaat
gtctaagtagtcaaggctagggtaaggggatcctacgatgctaggaagcc
cagaagagacacctggcccaggctggtcaggagacatcagagctaaggat
gaaggagaaatgagttctcaggtagactgcaaatggggagagtggagcag
agatctgtgtatggagatggggaccagcatacacagaaggttacggaact
gaggaaagcaaggtcacatcttgtgttttattgagatgcacatgtctatt
gtgtgaaggatggattggggaggccagtagcaaagggaagtgggtggggc
tgagaagataagaagagagtggataagacaaggacttgggactgggggga
aatcagtcctcaactggaaactcaatgtattttattctaggtatatgtat
gtgtgtgcttgagtgtatctgtgttcaccacatgtatgcatgtacctgtg
gggggccagaaaagggcaccaaagaccccggggctggagttacaattttt
tgtaagccacccactctggtgctggggggccaaagccaggtccttctgcc
agagcagtgagtgctctttaaccacttaagcccagctctagagccagctt
gttactgggactttcttcattttacagtatgagtttactttgggacagga
actggagagggaggatttgctggctcttggttcattctagtgggattggg
gtggggagtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_51042367_51043076
seq2: B6Ng01-122D18.b_46_755 (reverse)

seq1  ACTTACTGGCTTGCTCAACCTGCTCTCTTATAGAACCC-AAGACCACCAG  49
      ||||||| |||||||||||||||||||||||||||||| |||||||||||
seq2  ACTTACT-GCTTGCTCAACCTGCTCTCTTATAGAACCCAAAGACCACCAG  49

seq1  CCCAGGGATGACCCCACCCACAGTGGGCTGGGCCCTCCCCATCAATGACT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGGATGACCCCACCCACAGTGGGCTGGGCCCTCCCCATCAATGACT  99

seq1  AATTAAGGAAATGCCTTACAGCTGTATCTCGTGGAGGTGTTCCCTCAACG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGGAAATGCCTTACAGCTGTATCTCGTGGAGGTGTTCCCTCAACG  149

seq1  GAGGCTCCTCCCTCTATGATGACTCTAGTTTGTGTCAAATTGACACAAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTCCTCCCTCTATGATGACTCTAGTTTGTGTCAAATTGACACAAAA  199

seq1  CCAGCCAGTACAGCTGGAGAGATGGCTCAGTGGTTAAGAGTGTGCACTGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCAGTACAGCTGGAGAGATGGCTCAGTGGTTAAGAGTGTGCACTGC  249

seq1  TCCTACAAGAGGAACCTGAATTTGGTTTCCAGCACACGAGGGGTCAGATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACAAGAGGAACCTGAATTTGGTTTCCAGCACACGAGGGGTCAGATG  299

seq1  TCTCAGGCTTTCTCAGGCACCTGCACTTACATCCGTGTACCCATCTACAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGCTTTCTCAGGCACCTGCACTTACATCCGTGTACCCATCTACAG  349

seq1  ACATGTACAAATGTACATGATTTTAAAACAATAAATAAACAAAAACTCAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTACAAATGTACATGATTTTAAAACAATAAATAAACAAAAACTCAG  399

seq1  TATGATTGACTGTGCTGGAATCCCTGACTCTCAGCTAGTGAGACACTTTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTGACTGTGCTGGAATCCCTGACTCTCAGCTAGTGAGACACTTTA  449

seq1  GCTAGACTTTGAAGCAAAGAATCCCTCTTCTGCCATTTTCCTTTCCTGCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGACTTTGAAGCAAAGAATCCCTCTTCTGCCATTTTCCTTTCCTGCC  499

seq1  TTACCCCCAGCCCACCCACAGGCCTGATGGAAAAATCAGATTCTCCATTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCCCAGCCCACCCACAGGCCTGATGGAAAAATCAGATTCTCCATTC  549

seq1  CTCCTAACCTCCCAGAAGGGTCTTTTAACCACTTCCTCTTCCCCTCCCAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAACCTCCCAGAAGGGTCTTTTAACCACTTCCTCTTCCCCTCCCAC  599

seq1  TAGGTCTCATTTCTGGGTCCACCCAACACCAGTTCTTCCTGTCCTGGCAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCTCATTTCTGGGTCCACCCAACACCAGTTCTTCCTGTCCTGGCAG  649

seq1  GAACCAGCCTGACCTTGGATCACCTGACACACTCCCTGCCTCCCTTGGGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAGCCTGACCTTGGATCACCTGACACACTCCCTGCCTCCCTTGGGG  699

seq1  CCCTGGAATTC  710
      |||||||||||
seq2  CCCTGGAATTC  710

seq1: chr7_50890920_50891765
seq2: B6Ng01-122D18.g_67_927

seq1  GAATTCATATCTGCAGACTGTGCCAGACAGTCTGAGAGGGGCTTCCCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATCTGCAGACTGTGCCAGACAGTCTGAGAGGGGCTTCCCTGC  50

seq1  ATTTATTCCCCAGATAGTCATGAAAGCTATATACCCAGTGTTAACTGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTCCCCAGATAGTCATGAAAGCTATATACCCAGTGTTAACTGGCA  100

seq1  CAGCCAAGCCCTGCCTGCCTGGACCTCACAGGTCTGCCCTCAAACTAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAAGCCCTGCCTGCCTGGACCTCACAGGTCTGCCCTCAAACTAAAT  150

seq1  GTCTAAGTAGTCAAGGCTAGGGTAAGGGGATCCTACGATGCTAGGAAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAGTAGTCAAGGCTAGGGTAAGGGGATCCTACGATGCTAGGAAGCC  200

seq1  CAGAAGAGACACCTGGCCCAGGCTGGTCAGGAGACATCAGAGCTAAGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAGACACCTGGCCCAGGCTGGTCAGGAGACATCAGAGCTAAGGAT  250

seq1  GAAGGAGAAATGAGTTCTCAGGTAGACTGCAAATGGGGAGAGTGGAGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGAAATGAGTTCTCAGGTAGACTGCAAATGGGGAGAGTGGAGCAG  300

seq1  AGATCTGTGTATGGAGATGGGGACCAGCATACACAGAAGGTTACGGAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTGTGTATGGAGATGGGGACCAGCATACACAGAAGGTTACGGAACT  350

seq1  GAGGAAAGCAAGGTCACATCTTGTGTTTTATTGAGATGCACATGTCTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAGCAAGGTCACATCTTGTGTTTTATTGAGATGCACATGTCTATT  400

seq1  GTGTGAAGGATGGATTGGGGAGGCCAGTAGCAAAGGGAAGTGGGTGGGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAAGGATGGATTGGGGAGGCCAGTAGCAAAGGGAAGTGGGTGGGGC  450

seq1  TGAGAAGATAAGAAGAGAGTGGATAAGACAAGGACTTGGGACTGGGGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGATAAGAAGAGAGTGGATAAGACAAGGACTTGGGACTGGGGGGA  500

seq1  AATCAGTCCTCAACTGGAAACTCAATGTATTTTATTCTAGGTATATGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGTCCTCAACTGGAAACTCAATGTATTTTATTCTAGGTATATGTAT  550

seq1  GTGTGTGCTTGAGTGTATCTGTGTTCACCACATGTATGCATGTACCTGT-  599
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GTGTGTGCTTGAGTGTATCTGTGTTCACCACATGTATGCATGTACCTGTG  600

seq1  GGGGGCCAGAAAAGGGCACCAAAGACCCCGGGGCTGGAGTTACAA-TTGT  648
      ||||||||||||||||||||||||||||||||||||||||||||| || |
seq2  GGGGGCCAGAAAAGGGCACCAAAGACCCCGGGGCTGGAGTTACAATTTTT  650

seq1  TGTAAGCCACCCACTCTGGTGCT-GGGGGCCAAAGCCAGGTCC-TCTGCC  696
      ||||||||||||||||||||||| ||||||||||||||||||| ||||||
seq2  TGTAAGCCACCCACTCTGGTGCTGGGGGGCCAAAGCCAGGTCCTTCTGCC  700

seq1  AGAGCAGTGAGTGCTC-TTAACCAC-TAAG-CCAGCTCTAGAGCCAGCT-  742
      |||||||||||||||| |||||||| |||| |||||||||||||||||| 
seq2  AGAGCAGTGAGTGCTCTTTAACCACTTAAGCCCAGCTCTAGAGCCAGCTT  750

seq1  -GTACTGGGAC-TTCTTCA-TTTACAGTATGAG-TTACTTT-GGACAGGA  787
        ||||||||| ||||||| ||||||||||||| ||||||| ||||||||
seq2  GTTACTGGGACTTTCTTCATTTTACAGTATGAGTTTACTTTGGGACAGGA  800

seq1  ACTGGAGAGGGAGGATTTGCTGGCTCATGGTTCATTCTAGT-GGATTGGG  836
      |||||||||||||||||||||||||| |||||||||||||| ||||||||
seq2  ACTGGAGAGGGAGGATTTGCTGGCTCTTGGTTCATTCTAGTGGGATTGGG  850

seq1  GT-GGGAGTGA  846
      || ||||||||
seq2  GTGGGGAGTGA  861