BAC Information

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BAC

Clone NameB6Ng01-122I07
Chromosome7 (Build37)
Map Location 144,461,177 - 144,521,531
singlet/doubletdoublet
Overlap geneEbf3
Upstream geneLOC546009, EG621677, EG668771, Mgmt, EG621804
Downstream gene9430038I01Rik, Txnl2, LOC435235, Tcerg1l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122I07.bB6Ng01-122I07.g
ACCDH925921DH925922
length1,1591,115
definitionDH925921|Mus musculus domesticus DNA, BAC clone: B6Ng01-122I07, 5' end.DH925922|Mus musculus domesticus DNA, BAC clone: B6Ng01-122I07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(144,520,364 - 144,521,531)(144,461,177 - 144,462,314)
sequence
gaattcacctatgaatgtgtattgtttagaacatgcttcacagagctacc
aagctgaactttgcatgtcgctcctggtggccttcgtgttccatgtctgt
cctggacagggttctgtgtttgggttttctcagtctccattcatctgttg
caggtcctctctgcctcttaccctgctgcctcggggaccagaggctagaa
gaacagcagtgtagacagcagtgaggagggtccctgctcctcagtacaac
ccttgtgtgcattccacggagagatggtctcccttatctaaccagccaca
tccttcaggtcaggggtgatggaatctctctattcgtgctggaaatgcag
gagcgaagggggagaacatatttaactcctccactccagttagcacacga
tcactcaagattagaaacctggcttgcttcccccatcttggggatctggg
catctttgccaattagaagtagacttgccaatattccagattataaaagc
accaggaaagcgtctttgcgtcctcagcatactgggcatggaagtgtgcc
cttgtaaccccccaagcactcacacttggggggaagaagaggcaagcgaa
tcagaaatccaaagtcatccttggctatataacaagtttgaggcctgtct
aaaactaaagagataaaagacaatacgaattagttgcacgtacgacttca
tttttagacacagcacaaacccaatcctgcccaccctcctgattcatact
ctctctctctctctctctgtgggccatatcagtttagacttgtagtggac
acttagtcctgcaagtgtcctaagttcctttacattgggttgtcctgccc
tgacatcagtgtgcttgtgactctttcagtcagcatctatgctctctaga
ggtcagccctgcccaggtggggctaccttgccacaggcagtgagttctgc
aagttcctaggtagctgtcttacagggtagtagtactcacacaaaggaca
ctgagccaggagtctaagccacacccttgatttagttgggtcattaacac
tttcagctcccaaggaatcttgctgaagttgtctgtgtagctgctatgca
agtgatgcttccttatattggctgtcagccagcccaggaaattgggaggc
tttccatgg
gaattcttcttttaccgggtctaatccccctgagcctcaggaagaaatct
gtacgcagcgtttcattacaagagagcagtactgagtgacatttgaaaca
cacatctaagtcgccctgatgaagtttactcccatccaacaacaaatagc
agctgggtactattcccacttcttgggcagagatcggcacaggctcggtg
tctgagcaaaaagagccgaaatgtggatctgcaaattgacaggccaatct
ttaaacaaatgtgtttcttaggggggagaacacagctttgttcgagctaa
gcatttttcttttgcctgacagaaacattctgggcctgattagaaggccc
ttgttagggtccgtctcagacactgtgactccacgttttaacaagcatgc
aaagaaagcaatgcaaagataacaaaacgttgtcattaccatctccagtg
actccttgtgtgccttttggcacttgcacacatatcttctggaggctcac
acacagttgcatgcccgatgcgggggcccagcaccggctctagaggtctc
tacacgggaccttgtgggagaacagcacggagaggctgaggcgagcatgc
acccttaatagccgtcccttcctctcttggatgaataaacatacagttta
ttgctgcagccatacgaggtcctaagcaatgtgatggatggtctagtatt
tccgagggaacagccagcagggctgtcgcctgtaaacctgcccggagggc
ccagatgcacggacctcctgcacccagagagctgcagttccctgagacag
atccttcataaagacaagtagcatcatataagccagagaaccccaaggca
tgctgggagtgcaggttgtcacctgtgaggggagtggggctttagtgagc
tgtggaagggtgctctgagtaggatcagcacaagtataggtaactctggg
actctatgcagctgtagctgaagatcagtctctcactgtacaaaagcatg
acatgtaactttcaggcacacagggtctggactgttcacagtgacacaaa
caaagcagagcaattgtttctcaaccctagactcttcgtatggactggaa
ccttccagacaagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_144520364_144521531
seq2: B6Ng01-122I07.b_45_1203 (reverse)

seq1  CCATGGGGAAAAAAGCCTCCC-ATCTCCTGGGCTGGGCTGACAGCC-ATA  48
      ||||||     |||||||||| || ||||||||| ||||||||||| |||
seq2  CCATGG-----AAAGCCTCCCAATTTCCTGGGCT-GGCTGACAGCCAATA  44

seq1  TAAGGAAGCATCACCTTGGCATAGACAGCTAACACAGACAACTTCAGCAA  98
      ||||||||||||||  | |||||| ||||| |||||||||||||||||||
seq2  TAAGGAAGCATCAC--TTGCATAG-CAGCT-ACACAGACAACTTCAGCAA  90

seq1  GATTCCTGGGGAGCCTGAAGTGTAAATGACCCAACTAAATCAAGGGTGTG  148
      ||||||| ||||||   |||||| ||||||||||||||||||||||||| 
seq2  GATTCCTTGGGAGCTGAAAGTGTTAATGACCCAACTAAATCAAGGGTGT-  139

seq1  GGCTTAGACTCCTGGCTCAGTGTCCTTTGTGTGAGTACTACTACCCTGTA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAGACTCCTGGCTCAGTGTCCTTTGTGTGAGTACTACTACCCTGTA  189

seq1  AGACAGCTACCTAGGAACTTGCAGAACTCACTGCCTGTGGCAAGGTAGCC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCTACCTAGGAACTTGCAGAACTCACTGCCTGTGGCAAGGTAGCC  239

seq1  CCACCTGGGCAGGGCTGACCTCTAGAGAGCATAGATGCTGACTGAAAGAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGGGCAGGGCTGACCTCTAGAGAGCATAGATGCTGACTGAAAGAG  289

seq1  TCACAAGCACACTGATGTCAGGGCAGGACAACCCAATGTAAAGGAACTTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGCACACTGATGTCAGGGCAGGACAACCCAATGTAAAGGAACTTA  339

seq1  GGACACTTGCAGGACTAAGTGTCCACTACAAGTCTAAACTGATATGGCCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACTTGCAGGACTAAGTGTCCACTACAAGTCTAAACTGATATGGCCC  389

seq1  ACAGAGAGAGAGAGAGAGAGAGTATGAATCAGGAGGGTGGGCAGGATTGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAGAGAGAGAGAGAGAGTATGAATCAGGAGGGTGGGCAGGATTGG  439

seq1  GTTTGTGCTGTGTCTAAAAATGAAGTCGTACGTGCAACTAATTCGTATTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGCTGTGTCTAAAAATGAAGTCGTACGTGCAACTAATTCGTATTG  489

seq1  TCTTTTATCTCTTTAGTTTTAGACAGGCCTCAAACTTGTTATATAGCCAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTATCTCTTTAGTTTTAGACAGGCCTCAAACTTGTTATATAGCCAA  539

seq1  GGATGACTTTGGATTTCTGATTCGCTTGCCTCTTCTTCCCCCCAAGTGTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGACTTTGGATTTCTGATTCGCTTGCCTCTTCTTCCCCCCAAGTGTG  589

seq1  AGTGCTTGGGGGGTTACAAGGGCACACTTCCATGCCCAGTATGCTGAGGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTGGGGGGTTACAAGGGCACACTTCCATGCCCAGTATGCTGAGGA  639

seq1  CGCAAAGACGCTTTCCTGGTGCTTTTATAATCTGGAATATTGGCAAGTCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAAAGACGCTTTCCTGGTGCTTTTATAATCTGGAATATTGGCAAGTCT  689

seq1  ACTTCTAATTGGCAAAGATGCCCAGATCCCCAAGATGGGGGAAGCAAGCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTAATTGGCAAAGATGCCCAGATCCCCAAGATGGGGGAAGCAAGCC  739

seq1  AGGTTTCTAATCTTGAGTGATCGTGTGCTAACTGGAGTGGAGGAGTTAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCTAATCTTGAGTGATCGTGTGCTAACTGGAGTGGAGGAGTTAAA  789

seq1  TATGTTCTCCCCCTTCGCTCCTGCATTTCCAGCACGAATAGAGAGATTCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTCTCCCCCTTCGCTCCTGCATTTCCAGCACGAATAGAGAGATTCC  839

seq1  ATCACCCCTGACCTGAAGGATGTGGCTGGTTAGATAAGGGAGACCATCTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCCCTGACCTGAAGGATGTGGCTGGTTAGATAAGGGAGACCATCTC  889

seq1  TCCGTGGAATGCACACAAGGGTTGTACTGAGGAGCAGGGACCCTCCTCAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTGGAATGCACACAAGGGTTGTACTGAGGAGCAGGGACCCTCCTCAC  939

seq1  TGCTGTCTACACTGCTGTTCTTCTAGCCTCTGGTCCCCGAGGCAGCAGGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCTACACTGCTGTTCTTCTAGCCTCTGGTCCCCGAGGCAGCAGGG  989

seq1  TAAGAGGCAGAGAGGACCTGCAACAGATGAATGGAGACTGAGAAAACCCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGGCAGAGAGGACCTGCAACAGATGAATGGAGACTGAGAAAACCCA  1039

seq1  AACACAGAACCCTGTCCAGGACAGACATGGAACACGAAGGCCACCAGGAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGAACCCTGTCCAGGACAGACATGGAACACGAAGGCCACCAGGAG  1089

seq1  CGACATGCAAAGTTCAGCTTGGTAGCTCTGTGAAGCATGTTCTAAACAAT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACATGCAAAGTTCAGCTTGGTAGCTCTGTGAAGCATGTTCTAAACAAT  1139

seq1  ACACATTCATAGGTGAATTC  1168
      ||||||||||||||||||||
seq2  ACACATTCATAGGTGAATTC  1159

seq1: chr7_144461177_144462314
seq2: B6Ng01-122I07.g_68_1182

seq1  GAATTCTTCTTTTACCGGGTCTAATCCCCCTGAGCCTCAGGAAGAAATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTTTACCGGGTCTAATCCCCCTGAGCCTCAGGAAGAAATCT  50

seq1  GTACGCAGCGTTTCATTACAAGAGAGCAGTACTGAGTGACATTTGAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACGCAGCGTTTCATTACAAGAGAGCAGTACTGAGTGACATTTGAAACA  100

seq1  CACATCTAAGTCGCCCTGATGAAGTTTACTCCCATCCAACAACAAATAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTAAGTCGCCCTGATGAAGTTTACTCCCATCCAACAACAAATAGC  150

seq1  AGCTGGGTACTATTCCCACTTCTTGGGCAGAGATCGGCACAGGCTCGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGGTACTATTCCCACTTCTTGGGCAGAGATCGGCACAGGCTCGGTG  200

seq1  TCTGAGCAAAAAGAGCCGAAATGTGGATCTGCAAATTGACAGGCCAATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCAAAAAGAGCCGAAATGTGGATCTGCAAATTGACAGGCCAATCT  250

seq1  TTAAACAAATGTGTTTCTTAGGGGGGAGAACACAGCTTTGTTCGAGCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAAATGTGTTTCTTAGGGGGGAGAACACAGCTTTGTTCGAGCTAA  300

seq1  GCATTTTTCTTTTGCCTGACAGAAACATTCTGGGCCTGATTAGAAGGCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTTCTTTTGCCTGACAGAAACATTCTGGGCCTGATTAGAAGGCCC  350

seq1  TTGTTAGGGTCCGTCTCAGACACTGTGACTCCACGTTTTAACAAGCATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGGGTCCGTCTCAGACACTGTGACTCCACGTTTTAACAAGCATGC  400

seq1  AAAGAAAGCAATGCAAAGATAACAAAACGTTGTCATTACCATCTCCAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGCAATGCAAAGATAACAAAACGTTGTCATTACCATCTCCAGTG  450

seq1  ACTCCTTGTGTGCCTTTTGGCACTTGCACACATATCTTCTGGAGGCTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTTGTGTGCCTTTTGGCACTTGCACACATATCTTCTGGAGGCTCAC  500

seq1  ACACAGTTGCATGCCCGATGCGGGGGCCCAGCACCGGCTCTAGAGGTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTTGCATGCCCGATGCGGGGGCCCAGCACCGGCTCTAGAGGTCTC  550

seq1  TACACGGGACCTTGTGGGAGAACAGCACGGAGAGGCTGAGGCGAGCATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACGGGACCTTGTGGGAGAACAGCACGGAGAGGCTGAGGCGAGCATGC  600

seq1  ACCCTTAATAGCCGTCCCTTCCTCTCTTGGATGAATAAACATACAGTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTAATAGCCGTCCCTTCCTCTCTTGGATGAATAAACATACAGTTTA  650

seq1  TTGCTGCAGCCATACGAGGTCCTAAGCAATGTGATGGATGGTCTAGTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCAGCCATACGAGGTCCTAAGCAATGTGATGGATGGTCTAGTATT  700

seq1  TCCGAGGGAACAGCCAGCAGGGCTGTCGCCTGTAAACCTGCCCGGAGGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGAGGGAACAGCCAGCAGGGCTGTCGCCTGTAAACCTGCCCGGAGGGC  750

seq1  CCAGATGCACGGACCTCCTGCACCCAGAGAGCTGCAGTTCCCTGAGACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGCACGGACCTCCTGCACCCAGAGAGCTGCAGTTCCCTGAGACAG  800

seq1  ATCCTTCATAAAGACAAGTAGCATCATATAAGCCAGAGAACCCCAAGGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTCATAAAGACAAGTAGCATCATATAAGCCAGAGAACCCCAAGGCA  850

seq1  TGCTGGGAGTGCAGGTTGTCACCTGTGAGGGGAGTGGGGCTTTAGTGAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGAGTGCAGGTTGTCACCTGTGAGGGGAGTGGGGCTTTAGTGAGC  900

seq1  TGTGGAAGGGGTGCTCTGAGTAGGATCAGCAC-AGTATAGGTAACTCTGG  949
      ||||||| |||||||||||||||||||||||| |||||||||||||||||
seq2  TGTGGAA-GGGTGCTCTGAGTAGGATCAGCACAAGTATAGGTAACTCTGG  949

seq1  GACTCTATGCAGCTGTAGCTTGAAGAATCAGTCTCCTCACCTGTACAAAA  999
      ||||||||||||||||||| ||||| |||||||| |||| ||||||||||
seq2  GACTCTATGCAGCTGTAGC-TGAAG-ATCAGTCT-CTCA-CTGTACAAAA  995

seq1  GCATGAACATGGCCAACTTTCAGGGCACACAGGTGTTCTGGGACTGTCCA  1049
      ||||| |||||   |||||||| |||||||||  | ||| ||||||| ||
seq2  GCATG-ACATG--TAACTTTCA-GGCACACAG--GGTCT-GGACTGTTCA  1038

seq1  CAGTGGACACAAACAAAGCCAAGAGCCATCTGTTTCTCAAACCCTAGACT  1099
      |||| ||||||||||||||  ||||| || |||||||| |||||||||||
seq2  CAGT-GACACAAACAAAGC--AGAGCAAT-TGTTTCTC-AACCCTAGACT  1083

seq1  CTTTCTGTAATGGGGCCCTTTGGAGCTTCCAGACAAGCC  1138
      |||  |   ||||      | | | ||||||||||||||
seq2  CTTCGT---ATGG----ACTGGAACCTTCCAGACAAGCC  1115