BAC Information

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BAC

Clone NameB6Ng01-122O03
Chromosome7 (Build37)
Map Location 7,096,619 - 7,194,109
singlet/doubletdoublet
Overlap geneVmn2r-ps35, Zfp418, BC023179, 6430701C03Rik
Upstream geneZfp787, Zfp444, Galp, Zfp371, EG627821, Zfp667, Zfp583, LOC100042467, LOC100042459, Zfp78, Zfp28, LOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5, Olfr1347, Olfr1348, Olfr1349, LOC665328, Olfr1350, Zim2, Zim1, Peg3, Usp29, LOC627961, Aurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik
Downstream geneClcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122O03.bB6Ng01-122O03.g
ACCDH926196DH926197
length806805
definitionDH926196|Mus musculus domesticus DNA, BAC clone: B6Ng01-122O03, 5' end.DH926197|Mus musculus domesticus DNA, BAC clone: B6Ng01-122O03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,096,619 - 7,097,425)(7,193,365 - 7,194,109)
sequence
gaattcttctgacaatggagattccctacagatacttaaaagaacagcta
agttactctcatatgcaagcatttaccaaggcctaggaaatagggggttg
tggttttgcattattcatgagaaggtctgctagagcagaaccccctggtg
ctagctttcacaaggctcaaaggagtagcacaaattgtgactagggtatg
aaatctttacctgtcattagcctcggcacaatacagcatcttcaggggcc
agacacagaaggttcttttgatgacccagttagtaagacagaagatgtga
ttacggaatccttactggcatagtagatcttatcattatcatagcatctt
tttcttcaaaggctacagtcaagccacttactatatgatttggtatttgc
agaattgacttcttagaagataataattggcatgaactctctctttttaa
agatttattttattatagttaaatacactgtagctgtcttcagatacacc
agaacagggcatcagatctcattacagatgattgtgagccaccatgtggt
tgctgggatttgaacttaggtcctctggaagagcagttagtgctcttatc
tgctgagccacctctccagtcaggcatgaactctcttaaactctcctgtc
agcattattagatatgccttgtagaacaccggtgttgatgagtttatggt
cttgaaagagaatctactctttctgttgtgtaacactttcctctgactga
agctttccattctccagaaaatcttcttatagtgtgtgttaggattttat
aggttt
gaattcatagactaacaatgaaaatgggtggttttataaagagcatgcaa
atatccattagcataccccttccaatattggatataaactgtccttactc
attaattttctccgtgatgagaagatgatttttatctatatttttcagtt
atatggaaaacattttaataaatggtctccagtgattctgccaagagtgt
aggctgtggagaacattgtggctttctgagagtaactaaacaagaaatag
tgttggtattcagttctgtctgtaaaaaaatgtttatatgtgtgagtgta
tgtttctcactgtgtatatgtatattttctactctttatgtatatctgtg
tttatatttgtgatattttcaacatacatgtttatctctatatgaaagtg
gaagtaagcaacagattttttctatgtatgaatttctttaagtgtgtttg
tttatgtatgtgcatatgtttctttgtggttttgtcagagtaggtttctt
tgtgtacattgtatgtattttgtgagtgtttataagtacttattcggatt
tgtacctgctttgctgtgtatgagtctgcctatttcttcttacttggcat
ggacattgcctgccattttgtatttaggtatgagtataaatttctctgtg
tgtcaatatcattcatggctggtgcttatatatttatgtctctcccagta
ttttgctgtcagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacaag
aaacagctacatctgggttctttccataaaatcctgctagtgtatgcaat
ggtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_7096619_7097425
seq2: B6Ng01-122O03.b_47_852

seq1  GAATTCTTCTGACAAATGGAGATTCCCTACAGATACTTAAAAGAACAGCT  50
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGAC-AATGGAGATTCCCTACAGATACTTAAAAGAACAGCT  49

seq1  AAGTTACTCTCATATGCAAGCATTTACCAAGGCCTAGGAAATAGGGGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTACTCTCATATGCAAGCATTTACCAAGGCCTAGGAAATAGGGGGTT  99

seq1  GTGGTTTTGCATTATTCATGAGAAGGTCTGCTAGAGCAGAACCCCCTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTTGCATTATTCATGAGAAGGTCTGCTAGAGCAGAACCCCCTGGT  149

seq1  GCTAGCTTTCACAAGGCTCAAAGGAGTAGCACAAATTGTGACTAGGGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCTTTCACAAGGCTCAAAGGAGTAGCACAAATTGTGACTAGGGTAT  199

seq1  GAAATCTTTACCTGTCATTAGCCTCGGCACAATACAGCATCTTCAGGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCTTTACCTGTCATTAGCCTCGGCACAATACAGCATCTTCAGGGGC  249

seq1  CAGACACAGAAGGTTCTTTTGATGACCCAGTTAGTAAGACAGAAGATGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACAGAAGGTTCTTTTGATGACCCAGTTAGTAAGACAGAAGATGTG  299

seq1  ATTACGGAATCCTTACTGGCATAGTAGATCTTATCATTATCATAGCATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACGGAATCCTTACTGGCATAGTAGATCTTATCATTATCATAGCATCT  349

seq1  TTTTCTTCAAAGGCTACAGTCAAGCCACTTACTATATGATTTGGTATTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCAAAGGCTACAGTCAAGCCACTTACTATATGATTTGGTATTTG  399

seq1  CAGAATTGACTTCTTAGAAGATAATAATTGGCATGAACTCTCTCTTTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTGACTTCTTAGAAGATAATAATTGGCATGAACTCTCTCTTTTTA  449

seq1  AAGATTTATTTTATTATAGTTAAGTACACTGTAGCTGTCTTCAGATACAC  500
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAGATTTATTTTATTATAGTTAAATACACTGTAGCTGTCTTCAGATACAC  499

seq1  CAGAAGAGGGCATCAGATCTCATTACAGATGATTGTGAGCCACCATGTGG  550
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACAGGGCATCAGATCTCATTACAGATGATTGTGAGCCACCATGTGG  549

seq1  TTGCTGGGATTTGAACTTAGGTCCTCTGGAAGAGCAGTTAGTGCTCTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGGATTTGAACTTAGGTCCTCTGGAAGAGCAGTTAGTGCTCTTAT  599

seq1  CTGCTGAGCCACCTCTCCAGTCAGGCATGAACTCTCTTAAACTCTCCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGAGCCACCTCTCCAGTCAGGCATGAACTCTCTTAAACTCTCCTGT  649

seq1  CAGCATTATTAGATATGCCTTGTAGAACACCGGTGTTGATGAGTTTATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTATTAGATATGCCTTGTAGAACACCGGTGTTGATGAGTTTATGG  699

seq1  TCTTGAAAGAGAATCTACTCTTTCTGTTGTGTAACACTTTCCTCTGACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAAAGAGAATCTACTCTTTCTGTTGTGTAACACTTTCCTCTGACTG  749

seq1  AAGCTTTCCATTCTCCAGAAAATCTTCTTATAGTGTGTGTTAGGATTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAGCTTTCCATTCTCCAGAAAATCTTCTTATAGTGTGTGTTAGGATTTTA  799

seq1  TAGGTTT  807
      |||||||
seq2  TAGGTTT  806

seq1: chr7_7193365_7194109
seq2: B6Ng01-122O03.g_66_810 (reverse)

seq1  ACACACACACACACACACACACACACACACACACTGACAGCAAAATACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACTGACAGCAAAATACTG  50

seq1  GGAGAGACATAAATATATAAGCACCAGCCATGAATGATATTGACACACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGACATAAATATATAAGCACCAGCCATGAATGATATTGACACACAG  100

seq1  AGAAATTTATACTCATACCTAAATACAAAATGGCAGGCAATGTCCATGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTATACTCATACCTAAATACAAAATGGCAGGCAATGTCCATGCC  150

seq1  AAGTAAGAAGAAATAGGCAGACTCATACACAGCAAAGCAGGTACAAATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGAAGAAATAGGCAGACTCATACACAGCAAAGCAGGTACAAATCC  200

seq1  GAATAAGTACTTATAAACACTCACAAAATACATACAATGTACACAAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAGTACTTATAAACACTCACAAAATACATACAATGTACACAAAGAA  250

seq1  ACCTACTCTGACAAAACCACAAAGAAACATATGCACATACATAAACAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACTCTGACAAAACCACAAAGAAACATATGCACATACATAAACAAAC  300

seq1  ACACTTAAAGAAATTCATACATAGAAAAAATCTGTTGCTTACTTCCACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTAAAGAAATTCATACATAGAAAAAATCTGTTGCTTACTTCCACTT  350

seq1  TCATATAGAGATAAACATGTATGTTGAAAATATCACAAATATAAACACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATAGAGATAAACATGTATGTTGAAAATATCACAAATATAAACACAG  400

seq1  ATATACATAAAGAGTAGAAAATATACATATACACAGTGAGAAACATACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACATAAAGAGTAGAAAATATACATATACACAGTGAGAAACATACAC  450

seq1  TCACACATATAAACACTTTTCTACAGACAGAACTGAATACCAACACTATT  500
      ||||||||||||||| |||| |||||||||||||||||||||||||||||
seq2  TCACACATATAAACATTTTTTTACAGACAGAACTGAATACCAACACTATT  500

seq1  TCTTGTTTAGTTACTCTCAGAAAGCCACAATGTTCTCCACAGCCTACACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTTAGTTACTCTCAGAAAGCCACAATGTTCTCCACAGCCTACACT  550

seq1  CTTGGCAGAATCACTGGAGACCATTTATTAAAATGTTTTCCATATAACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCAGAATCACTGGAGACCATTTATTAAAATGTTTTCCATATAACTG  600

seq1  AAAAATATAGATAAAAATCATCTTCTCATCACGGAGAAAATTAATGAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATAGATAAAAATCATCTTCTCATCACGGAGAAAATTAATGAGTA  650

seq1  AGGACAGTTTATATCCAATATTGGAAGGGGTATGCTAATGGATATTTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGTTTATATCCAATATTGGAAGGGGTATGCTAATGGATATTTGCA  700

seq1  TGCTCTTTATAAAACCACCCATTTTCATTGCTAGTCTATGAATTC  745
      |||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGCTCTTTATAAAACCACCCATTTTCATTGTTAGTCTATGAATTC  745