BAC Information

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BAC

Clone NameB6Ng01-123J21
Chromosome7 (Build37)
Map Location 102,532,270 - 102,647,042
singlet/doubletdoublet
Overlap geneLOC666823
Upstream geneEG666816, LOC100040132
Downstream geneFrda-ps, EG666836, Odz4, LOC670727, LOC666858
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123J21.bB6Ng01-123J21.g
ACCDH926734DH926735
length1,035906
definitionDH926734|Mus musculus domesticus DNA, BAC clone: B6Ng01-123J21, 5' end.DH926735|Mus musculus domesticus DNA, BAC clone: B6Ng01-123J21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,646,000 - 102,647,042)(102,532,270 - 102,533,174)
sequence
gaattctattcactgagttttactacccaatacaggcatttttatggaat
gaaagtaagaaacaaagcattgcaggaaaaaagaggtgtgcctctgttct
tcttggggtacacagatgaccaacaggtggtgatggagtgctgtgcccac
cagggtaggcctgccgagatgtctgagctgtggtgggagccgaggttgcc
tgagttccttctttccagggtcctctcctagggagcctggacccaggagc
accatgtgttgggtgtgaatggagacatctgtgtaggatcctcctctgga
cagagggtggctgtgtggagaaggagtatacagggacttctggttgcagc
ctggcttttaaaagcaaccccaatataaatattttgttatctttagatat
gacctggcttgggaacaacctaacttatgtaacctagctgttttgcgaaa
ataaagtaataaagaaatagccatcaactgagatttgttagctgagattc
actagggccttgaaagaattatccccagactttgtggctggcttttccat
tttaggaagcatcttgtagctgaccccaagacagaaagggtacttacaaa
acaatagcttttaaaattactaataagacttgtgaagagacacttaggag
ttcatcccagtacttaaatttacaaaagaaactaccttcaaggtgtggtt
ctcctgcagtctttgaagaacaaagttgtttgcaaagcaatgcaatgcag
tgcaatgaaaaaaaaagagtggtacctgctgtacatgtaaaaaaagctgt
atgtgctcttaacaggcttccacaacacattaagacagacaatgctccta
cctgtatctcttgaacatataaaaatatttgtacctaacttaaaataatc
gtcacatgggcatatcctatagtccaaagggacatactactgtagaaaaa
tttcacagatgactcaacaagaacagagatcaaacgtgggggagaattct
cttctaccagcgactcactcaacagtcttatttat
gaattctttatgtattcacgacaggtctgatttcaagagcagtttcccca
gtaagctgataggtctttcaaaaacacctcttatataaaaggtgtactaa
aatgtctaagatcagctagaatgttctacaaggaaatgggtttatttgaa
gttagccaggtttttctctacgatcctagatttccttagctgaataaaca
aataaaagaagaatgaaaataattacactttgtaaggaatacgtacagaa
tattggtggctggagaggtggctcagtggtgaagagcactgactgttctt
gcagaggacctaagtcagaatcccagcaccctccatgtgagcacgtatgg
tgcacaaacatgcatgtgcagaaaatattaataagcatacaataatttaa
gtgaaaaatgatttgctgatgaagggcagtgactcattggtaacagtatt
aactgtgcaaacatgaggaccccaggtcaaatttccaacaaatacgttaa
aaactgatgatgtgagtcagggagggaggagaggctgggggtcctaaaaa
gttgtggatgggaaactgtggacaggctgtattgtgtgagacgataatgt
gttttcaatataattcttaattaattcaaagatatgggcgtggctgctaa
gctctccttgcctcgtctctaaagggcaggggtgagagttcctgggacta
cctgcctgttgcctaactccagggtgagttagagaactatcttaagagag
taaaataaagagttcataaagctggacatcaaatattgttctctggcttt
ctttcttgtgcactcaggcacttccacacttacactccactgtgtgtaca
attattatattggtattatatctcctccctccctgattcactagacaaaa
cttcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_102646000_102647042
seq2: B6Ng01-123J21.b_43_1077 (reverse)

seq1  ATAAATAAGGACTTGTTGAGTGAATTGGTGGGAAGAGAGAATTCTCCCCC  50
      |||||||| ||| |||||||||| | | ||| |  |||||||||||||||
seq2  ATAAATAA-GAC-TGTTGAGTGAGTCGCTGGTAGAAGAGAATTCTCCCCC  48

seq1  ACCTTTTGTTCTTCTGTTCCTTGTTTGAGTCATCTGTGAAATTTTTCTAC  100
      | | |||| || |||||| |||| ||||||||||||||||||||||||||
seq2  A-CGTTTGATC-TCTGTT-CTTG-TTGAGTCATCTGTGAAATTTTTCTAC  94

seq1  ACTAGTATGTCCCCTTGGGCTATAGGATATGCCCCTGTGATGAATTATTT  150
      | ||||||||||| |||| ||||||||||||||| ||||| | |||||||
seq2  AGTAGTATGTCCCTTTGGACTATAGGATATGCCCATGTGACG-ATTATTT  143

seq1  TAAGTTAGGTACAAATATTTTTAAATGTTCAAGAGATACAGGTAGGAGCA  200
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TAAGTTAGGTACAAATATTTTTATATGTTCAAGAGATACAGGTAGGAGCA  193

seq1  TTGTCTGTCTTAATGTGTTGTGGAAGCCCTGTTAAGAGCACATACAGCTT  250
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTGTCTGTCTTAATGTGTTGTGGAAG-CCTGTTAAGAGCACATACAGCTT  242

seq1  TTTTTACATGTACAGCAGGTACCACTCTTTTTTTTTCATTGCACTGCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACATGTACAGCAGGTACCACTCTTTTTTTTTCATTGCACTGCATT  292

seq1  GCATTGCTTTGCAAACAACTTTGTTCTTCAAAGACTGCAGGAGAACCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGCTTTGCAAACAACTTTGTTCTTCAAAGACTGCAGGAGAACCACA  342

seq1  CCTTGAAGGTAGTTTCTTTTGTAAATTTAAGTACTGGGATGAACTCCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAAGGTAGTTTCTTTTGTAAATTTAAGTACTGGGATGAACTCCTAA  392

seq1  GTGTCTCTTCACAAGTCTTATTAGTAATTTTAAAAGCTATTGTTTTGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTCTTCACAAGTCTTATTAGTAATTTTAAAAGCTATTGTTTTGTAA  442

seq1  GTACCCTTTCTGTCTTGGGGTCAGCTACAAGATGCTTCCTAAAATGGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCTTTCTGTCTTGGGGTCAGCTACAAGATGCTTCCTAAAATGGAAA  492

seq1  AGCCAGCCACAAAGTCTGGGGATAATTCTTTCAAGGCCCTAGTGAATCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGCCACAAAGTCTGGGGATAATTCTTTCAAGGCCCTAGTGAATCTC  542

seq1  AGCTAACAAATCTCAGTTGATGGCTATTTCTTTATTACTTTATTTTCGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAACAAATCTCAGTTGATGGCTATTTCTTTATTACTTTATTTTCGCA  592

seq1  AAACAGCTAGGTTACATAAGTTAGGTTGTTCCCAAGCCAGGTCATATCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGCTAGGTTACATAAGTTAGGTTGTTCCCAAGCCAGGTCATATCTA  642

seq1  AAGATAACAAAATATTTATATTGGGGTTGCTTTTAAAAGCCAGGCTGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAACAAAATATTTATATTGGGGTTGCTTTTAAAAGCCAGGCTGCAA  692

seq1  CCAGAAGTCCCTGTATACTCCTTCTCCACACAGCCACCCTCTGTCCAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGTCCCTGTATACTCCTTCTCCACACAGCCACCCTCTGTCCAGAG  742

seq1  GAGGATCCTACACAGATGTCTCCATTCACACCCAACACATGGTGCTCCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATCCTACACAGATGTCTCCATTCACACCCAACACATGGTGCTCCTG  792

seq1  GGTCCAGGCTCCCTAGGAGAGGACCCTGGAAAGAAGGAACTCAGGCAACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCAGGCTCCCTAGGAGAGGACCCTGGAAAGAAGGAACTCAGGCAACC  842

seq1  TCGGCTCCCACCACAGCTCAGACATCTCGGCAGGCCTACCCTGGTGGGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCTCCCACCACAGCTCAGACATCTCGGCAGGCCTACCCTGGTGGGCA  892

seq1  CAGCACTCCATCACCACCTGTTGGTCATCTGTGTACCCCAAGAAGAACAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTCCATCACCACCTGTTGGTCATCTGTGTACCCCAAGAAGAACAG  942

seq1  AGGCACACCTCTTTTTTCCTGCAATGCTTTGTTTCTTACTTTCATTCCAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACACCTCTTTTTTCCTGCAATGCTTTGTTTCTTACTTTCATTCCAT  992

seq1  AAAAATGCCTGTATTATGTAGTAAAACTCAGTGAATAGAATTC  1043
      |||||||||||||||  ||||||||||||||||||||||||||
seq2  AAAAATGCCTGTATTGGGTAGTAAAACTCAGTGAATAGAATTC  1035

seq1: chr7_102532270_102533174
seq2: B6Ng01-123J21.g_66_971

seq1  GAATTCTTTATGTATTCACGACAGGTCTGATTTCAAGAGCAGTTTCCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATGTATTCACGACAGGTCTGATTTCAAGAGCAGTTTCCCCA  50

seq1  GTAAGCTGATAGGTCTTTCAAAAACACCTCTTATATAAAAGGTGTACTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCTGATAGGTCTTTCAAAAACACCTCTTATATAAAAGGTGTACTAA  100

seq1  AATGTCTAAGATCAGCTAGAATGTTCTAGAAGGAAATGGGTTTATTTGAA  150
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AATGTCTAAGATCAGCTAGAATGTTCTACAAGGAAATGGGTTTATTTGAA  150

seq1  GTTAGCCAGGTTTTTCTCTACGATCCTAGATTTCCTTAGCTGAATAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCCAGGTTTTTCTCTACGATCCTAGATTTCCTTAGCTGAATAAACA  200

seq1  AATAAAAGAAGAATGAAAATAATTACACTTTGTAAGGAATACGTACAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAGAAGAATGAAAATAATTACACTTTGTAAGGAATACGTACAGAA  250

seq1  TATTGGTGGCTGGAGAGGTGGCTCAGTGGTGAAGAGCACTGACTGTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGTGGCTGGAGAGGTGGCTCAGTGGTGAAGAGCACTGACTGTTCTT  300

seq1  GCAGAGGACCTAAGTCAGAATCCCAGCACCCTCCATGTGAGCACGTATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGACCTAAGTCAGAATCCCAGCACCCTCCATGTGAGCACGTATGG  350

seq1  TGCACAAACATGCATGTGCAGAAAATATTAATAAGCATACAATAATTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAAACATGCATGTGCAGAAAATATTAATAAGCATACAATAATTTAA  400

seq1  GTGAAAAATGATTTGCTGATGAAGGGCAGTGACTCATTGGTAACAGTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAAATGATTTGCTGATGAAGGGCAGTGACTCATTGGTAACAGTATT  450

seq1  AACTGTGCAAACATGAGGACCCCAGGTCAAATTTCCAACAAATACGTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGCAAACATGAGGACCCCAGGTCAAATTTCCAACAAATACGTTAA  500

seq1  AAACTGATGATGTGAGTCAGGGAGGGAGGAGAGGCT-GGGGTCCTAAAAA  549
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAACTGATGATGTGAGTCAGGGAGGGAGGAGAGGCTGGGGGTCCTAAAAA  550

seq1  GTTGTGGATGGGAAACTGTGGCCAGGCTGTATTGTGTGAGACGATAATGT  599
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GTTGTGGATGGGAAACTGTGGACAGGCTGTATTGTGTGAGACGATAATGT  600

seq1  GTTTTCAATATAATTCTTAATTAATTCAAAGATATGGGCGTGGCTGCTAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAATATAATTCTTAATTAATTCAAAGATATGGGCGTGGCTGCTAA  650

seq1  GCTCTCCTTGCCTCGTCTCTAAAGGGGCAGGGCTGAGAGTTCCTGGGACT  699
      ||||||||||||||||||||||| |||||||| |||||||||||||||||
seq2  GCTCTCCTTGCCTCGTCTCTAAA-GGGCAGGGGTGAGAGTTCCTGGGACT  699

seq1  ACCTGCCTGTTGCCTAGCTCCAGGTTGAGTTAGAGAACTATCTTAAGAGA  749
      |||||||||||||||| ||||||| |||||||||||||||||||||||||
seq2  ACCTGCCTGTTGCCTAACTCCAGGGTGAGTTAGAGAACTATCTTAAGAGA  749

seq1  GTAAAATAGAGAGTTCACAAAGCTGGACATCAGATATTGTTCTCTGGC-T  798
      |||||||| |||||||| |||||||||||||| ||||||||||||||| |
seq2  GTAAAATAAAGAGTTCATAAAGCTGGACATCAAATATTGTTCTCTGGCTT  799

seq1  TCCTTCCTGTGCACGCAGGCACTTCCACCCTTACACACAACTGTGTGTAC  848
      || ||| ||||||| ||||||||||||| ||||||| | |||||||||||
seq2  TCTTTCTTGTGCACTCAGGCACTTCCACACTTACACTCCACTGTGTGTAC  849

seq1  AATATATTATATT-GTATTATATCTCCTCCCTCCCTGATTCACTACACAA  897
      ||| ||||||||| ||||||||||||||||||||||||||||||| ||||
seq2  AAT-TATTATATTGGTATTATATCTCCTCCCTCCCTGATTCACTAGACAA  898

seq1  AACTTCAA  905
      ||||||||
seq2  AACTTCAA  906