BAC Information

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BAC

Clone NameB6Ng01-123O16
Chromosome7 (Build37)7 (Build37)
Map Location 48,377,343 - 48,378,49246,514,346 - 46,515,076
singlet/doubletsingletsinglet
Overlap geneEG627987
Upstream geneEG628161, LOC100039094, 2900093B09Rik, 4930433I11Rik, EG233164, LOC668555
Downstream geneLOC100039269, LOC545955, EG628304, LOC668561, EG434172, LOC100039221, LOC668565, AI987944, EG269902, LOC100039375, EG628359, 2610021A01Rik, 2810426N06Rik, LOC668576, Gprc2a-rs5, LOC628372, EG668579, EG628403, EG628422, Gprc2a-rs1, EG628444, EG434174, EG637913, EG434175
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123O16.bB6Ng01-123O16.g
ACCDH926958DH926959
length1,139940
definitionDH926958|Mus musculus domesticus DNA, BAC clone: B6Ng01-123O16, 5' end.DH926959|Mus musculus domesticus DNA, BAC clone: B6Ng01-123O16, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(48,377,343 - 48,378,492)(46,514,346 - 46,515,076)
sequence
gaattctcttactcttaaaataatatagtgagttaggtgcagtgcatgta
ccactgctaaaatagccatcctgcgacttcttttattttcctttgctgga
tacttcagagaagacacatgacaaagattttaagattatgtagacatgtt
ctctaatactgagacacaacgcaagcccaaggattttagtttcttaaatc
aattttcatgccacttgtaagaagcttgtcaaacatgggactggaggata
gcctctgttgttgaaattcttgcctggactggatttggatatctaaaccc
atgtaaacatccaggcttctgagagtatctgtgcaatgctgttggcacaa
gttcacagagacaagttctcagaaattattgaccagataacccacctaat
agtaaagctccaaggaaatgagaggcaatttatctttttatacaaagggg
aagggaagtaaggaccacacgccaaaggaattctgtaaccttaccatgtt
ggctatgcatccacacatcacacgaactcaaaggaacacaaaatcatctg
agaaatcctgacatggcatggataccagaaacaacagagcagtcaccatt
tttctgcaaacattgcagacagcttataggaatgacttccccatggctgc
agaggtcaaattgctgttcttcaccaaaggaggtcaggactggaactcaa
ccaggtcacgatacaggagccaatgctaaggccatcaagggatatttctt
aatggctttctcagtttgctcccgtatagaactcaagactgccagcccag
ggatggcaccacccacaatgggccctccccctttgatcatcagctaagaa
aatgccccacaactggatttcatggaggcacttccacaactcaagctcct
ttctccgtgataactgcagcctgtgtcaagttgacacacaaaaccagcca
gtacaattgacctcttgtcacttgacacacaaacatcactataagtttca
acccttactttattcatctccagatccaaatactttaaagtcccacagtc
tttacattattaaaaggttcatccttttatagtacaaatctttaatattc
caaagtcttttaaaatggaagtctctaactctggctcca
gaattctgcatggctagggataggtgttgttaatggcccgtccccatcaa
cagatggtgtcttcctctgggaaactgggttgcaagtgatgtagaattct
ggactctgcagcaggcaaaatgtttggcttgaaggtgacaatcccaggga
tgtatccagttccaccactacaaaagagtcaaggaagaagtcagtataag
gtaaataagattttctccttttgtagcactagaggaaaattggtaccagc
atagtggggtatccctgtgacaatctgaccgttttgtggaaggactttgg
aattttgggctaaaagatccatttggtgttaaatgctctgtgggatgttg
tgtaggagcttggaagacacttttgagaacaatgcagaagatggaggcct
gacttgtgaaatttcagttttgattagctggggctgaagaatcagctgtg
atgaacaagataccagaaccactaatgtgaatctttgtgttactgggact
attgatgctggttagctggagctaagaaattatcagtgattaaaaggaga
ccaacattgttgaggtgaaatcttctaggaagatacctaaggacatacct
tgagttatagctggacttggtaatgtgtaagagtcaccctggtggtactg
gtgttgaaggcattaagagcatctgagtctacagaaggccattgatgaag
gtgcagtctcagttgcaattgatggccaagaactgaaggaatcatgcaaa
ggaattgaggtttgccaccatgaagagagcctatgagaagctatttatga
ggactagttgcagtggaagacagcagatttttggagataccagcaccatg
aaatgaccaccaagaacagcagccagcagtggattataggcatctgtagc
ctagaaaaaaggggtgtgctaaaaagagcagagctggagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_48377343_48378492
seq2: B6Ng01-123O16.b_48_1186

seq1  GAATTCTCTTACTCTTAAAATAATATAGTGAGTTAGGTGCAGTGCATGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTACTCTTAAAATAATATAGTGAGTTAGGTGCAGTGCATGTA  50

seq1  CCACTGCTAAAATAGCCATCCTGCGACTTCTTTTATTTTCCTTTGCTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGCTAAAATAGCCATCCTGCGACTTCTTTTATTTTCCTTTGCTGGA  100

seq1  TACTTCAGAGAAGACACATGACAAAGATTTTAAGATTATGTAGACATGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCAGAGAAGACACATGACAAAGATTTTAAGATTATGTAGACATGTT  150

seq1  CTCTAATACTGAGACACAACGCAAGCCCAAGGATTTTAGTTTCTTAAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATACTGAGACACAACGCAAGCCCAAGGATTTTAGTTTCTTAAATC  200

seq1  AATTTTCATGCCACTTGTAAGAAGCTTGTCAAACATGGGACTGGAGGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCATGCCACTTGTAAGAAGCTTGTCAAACATGGGACTGGAGGATA  250

seq1  GCCTCTGTTGTTGAAATTCTTGCCTGGACTGGATTTGGATATCTAAACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGTTGTTGAAATTCTTGCCTGGACTGGATTTGGATATCTAAACCC  300

seq1  ATGTAAACATCCAGGCTTCTGAGAGTATCTGTGCAATGCTGTTGGCACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAACATCCAGGCTTCTGAGAGTATCTGTGCAATGCTGTTGGCACAA  350

seq1  GTTCACAGAGACAAGTTCTCAGAAATTATTGACCAGATAACCCACCTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACAGAGACAAGTTCTCAGAAATTATTGACCAGATAACCCACCTAAT  400

seq1  AGTAAAGCTCCAAGGAAATGAGAGGCAATTTATCTTTTTATACAAAGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGCTCCAAGGAAATGAGAGGCAATTTATCTTTTTATACAAAGGGG  450

seq1  AAGGGAAGTAAGGACCACACGCCAAAGGAATTCTGTAACCTTACCATGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAGTAAGGACCACACGCCAAAGGAATTCTGTAACCTTACCATGTT  500

seq1  GGCTATGCATCCACACATCACACGAACTCAAAGGAACACAAAATCATCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATGCATCCACACATCACACGAACTCAAAGGAACACAAAATCATCTG  550

seq1  AGAAATCCTGACATGGCATGGATACCAGAAACAACAGAGCAGTCACCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCCTGACATGGCATGGATACCAGAAACAACAGAGCAGTCACCATT  600

seq1  TTTCTGCAAACATTGCAGACAGCTTATAGGAATGACTTCCCCATGGCTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCAAACATTGCAGACAGCTTATAGGAATGACTTCCCCATGGCTGC  650

seq1  AGAGGTCAAATTGCTGTTCTTCACCAAAGGAGGTCAGGACTGGAACTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTCAAATTGCTGTTCTTCACCAAAGGAGGTCAGGACTGGAACTCAA  700

seq1  CCAGGTCACGATACAGGAGCCAATGCTAAGGCCATCAAGGGATATTTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTCACGATACAGGAGCCAATGCTAAGGCCATCAAGGGATATTTCTT  750

seq1  AATGGCTTTCTCAGTTTGCTCCCGTATAGAACTCAAGACTGCCAGCCCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTTTCTCAGTTTGCTCCCGTATAGAACTCAAGACTGCCAGCCCAG  800

seq1  GGATGGCACCACCCACAATGGGCCCTCCCCCTTTGATCATCAGCTAAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGCACCACCCACAATGGGCCCTCCCCCTTTGATCATCAGCTAAGAA  850

seq1  AATGCCCCACAACTGGATTTCATGGAGGCACTTCCACAACTCAAGCTCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCCCACAACTGGATTTCATGGAGGCACTTCCACAACTCAAGCTCCT  900

seq1  TTCTCCGTGATAACTGCAGCCTGTGTCAAGTTGACACACAAAACCAGCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCGTGATAACTGCAGCCTGTGTCAAGTTGACACACAAAACCAGCCA  950

seq1  GTACAATTGACCTCTTGTCAACTTGACACACAAACATCACTATTAAGTTT  1000
      ||||||||||||||||||| |||||||||||||||||||||| |||||||
seq2  GTACAATTGACCTCTTGTC-ACTTGACACACAAACATCACTA-TAAGTTT  998

seq1  CAACCCTTACTTTATTCATCTCCAAGATCCAAATAACTTTAAAAGTCCCA  1050
      ||||||||||||||||||||||| |||||||||| ||||| |||||||||
seq2  CAACCCTTACTTTATTCATCTCC-AGATCCAAAT-ACTTT-AAAGTCCCA  1045

seq1  CAGTCTTTACA-TATTAAAAGTTCAATCCTTTTATAATTACCAATATCTT  1099
      ||||||||||| ||||||||| |  |||||||||| | |||  | |||||
seq2  CAGTCTTTACATTATTAAAAGGTTCATCCTTTTAT-AGTAC--AAATCTT  1092

seq1  TTAAAATCCAAAGTCTTTTAAAAATTGAAAGTCTCTTAACTCTGGGCTCC  1149
      | | | |||||||||||||||||  || ||||||| ||||||| ||||||
seq2  TAATATTCCAAAGTCTTTTAAAA--TGGAAGTCTC-TAACTCT-GGCTCC  1138

seq1  A  1150
      |
seq2  A  1139

seq1: chr7_46514346_46515076
seq2: B6Ng01-123O16.g_67_797

seq1  GAATTCTGCATGGCTACGGATAGGGGTTGTTAATGGCCCGTCCCCATCAA  50
      |||||||||||||||| ||||||| |||||||||||||||||||||||||
seq2  GAATTCTGCATGGCTAGGGATAGGTGTTGTTAATGGCCCGTCCCCATCAA  50

seq1  CAGATGGTGTCTTCCTCTGGGAAACTGTGGTGCAAGTGATGTATAATTCT  100
      ||||||||||||||||||||||||||| | ||||||||||||| ||||||
seq2  CAGATGGTGTCTTCCTCTGGGAAACTGGGTTGCAAGTGATGTAGAATTCT  100

seq1  GGACTCTGTAGCAGAGAAAGTGTTTGGCCTGAAGGCGACAATCCCAGGGA  150
      |||||||| |||||  ||| |||||||| |||||| ||||||||||||||
seq2  GGACTCTGCAGCAGGCAAAATGTTTGGCTTGAAGGTGACAATCCCAGGGA  150

seq1  TGTATCCAGTTCCACCACTGCAAAAGAGTCAAGGAAGAAGTCAGTACACA  200
      ||||||||||||||||||| |||||||||||||||||||||||||| |  
seq2  TGTATCCAGTTCCACCACTACAAAAGAGTCAAGGAAGAAGTCAGTATAAG  200

seq1  GTAAATAAGATTTTCTCCTTTTGTAGCACTACAGGGAAATTGGTACCAGC  250
      ||||||||||||||||||||||||||||||| ||| ||||||||||||||
seq2  GTAAATAAGATTTTCTCCTTTTGTAGCACTAGAGGAAAATTGGTACCAGC  250

seq1  ATAGTGGGGTATCCCTGTGATAATCTGACCTTGTTTGTGAAAGGACTTTG  300
      |||||||||||||||||||| ||||||||| | |||||| ||||||||||
seq2  ATAGTGGGGTATCCCTGTGACAATCTGACCGT-TTTGTGGAAGGACTTTG  299

seq1  GAACTTTGGGCTAAAAGATCCATTCGGTGTTAAATGCTCTGTGGGATGTT  350
      ||| |||||||||||||||||||| |||||||||||||||||||||||||
seq2  GAATTTTGGGCTAAAAGATCCATTTGGTGTTAAATGCTCTGTGGGATGTT  349

seq1  GTGTAGGAGCTTGGAAGACATGGTTGAGATCAATGCAGAAGATGGAGGCC  400
      ||||||||||||||||||||   |||||| ||||||||||||||||||||
seq2  GTGTAGGAGCTTGGAAGACACTTTTGAGAACAATGCAGAAGATGGAGGCC  399

seq1  TGACTTGTGAAATTTCAGTTTTGATTAGCTGGGGCTGAAGAATCAGCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTGTGAAATTTCAGTTTTGATTAGCTGGGGCTGAAGAATCAGCTGT  449

seq1  GATGAACAAGATACCAGAACCACTAAAGTGAATCTTTGTGTTAGTGGGAC  500
      |||||||||||||||||||||||||| |||||||||||||||| ||||||
seq2  GATGAACAAGATACCAGAACCACTAATGTGAATCTTTGTGTTACTGGGAC  499

seq1  TATTGATGCTGGTTAGCTGGAGCTAAGAAATTATCGGTGATTAAAAGGAG  550
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TATTGATGCTGGTTAGCTGGAGCTAAGAAATTATCAGTGATTAAAAGGAG  549

seq1  ACCAACATTG-TGAGGTGAAATCTTCTAGGAAGATAGGCAAGTTTGTACC  599
      |||||||||| |||||||||||||||||||||||||   |||    ||||
seq2  ACCAACATTGTTGAGGTGAAATCTTCTAGGAAGATACCTAAGGACATACC  599

seq1  TTGTGTTGTAGCTGGACTTGGTAATGTGTAAGAGTCACCCAGGTGGTACT  649
      ||| ||| |||||||||||||||||||||||||||||||| |||||||||
seq2  TTGAGTTATAGCTGGACTTGGTAATGTGTAAGAGTCACCCTGGTGGTACT  649

seq1  GGTGTTGAAGGCATTAAGAGCATTTGAGGCTACAGAAGGCCATTGGTGAA  699
      ||||||||||||||||||||||| |||| |||||||||||||||| ||||
seq2  GGTGTTGAAGGCATTAAGAGCATCTGAGTCTACAGAAGGCCATTGATGAA  699

seq1  AGTGCAGCCTCAGTTGCAATTGATGGCCAAGA  731
       |||||| ||||||||||||||||||||||||
seq2  GGTGCAGTCTCAGTTGCAATTGATGGCCAAGA  731