BAC Information

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BAC

Clone NameB6Ng01-124D07
Chromosome7 (Build37)
Map Location 78,116,553 - 78,237,668
singlet/doubletdoublet
Overlap genenone
Upstream geneNr2f2, LOC100042833, B130024G19Rik, LOC100042838, LOC665486, LOC100041957
Downstream geneLOC665535, Mctp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124D07.bB6Ng01-124D07.g
ACCDH927173DH927174
length9641,105
definitionDH927173|Mus musculus domesticus DNA, BAC clone: B6Ng01-124D07, 5' end.DH927174|Mus musculus domesticus DNA, BAC clone: B6Ng01-124D07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(78,116,553 - 78,117,514)(78,236,542 - 78,237,668)
sequence
gaattccaacatttgggcatccttccgagggtagccaaggaagggtggag
ggagagaaatgggcagggttgagtgtgaatggcctggcttgttgggagcc
tggggcagcgggtgtaatggtatgcgaagtgaccctgcgcataggcactg
tgggtagccccagcttttttgtaaaagaagcatttgcagtggaggtttgg
gtttcaggcctcccagtcatcaatcatcacagcccattcttctctttgac
agctcagtacaaggcctgacatttgacacccaagaccccggacttatgtg
cagacacaagctgaggccctaagggagggaaaggggggggggcaagagaa
aagctaagctgattttttttttttagatgctgcaaacagaggaagatacc
aaacaaattgtgacagccacaggaaatgattctacaggagagacagcatc
acagtgagttctgtcctctactttaggatgtttttgtatcttcaggatgc
tttaaatagctctgagtggaccctttgtagcacatatctgatcctggctg
gccactttccatttggcccgatagaatccaacctcagcattcacaaatgg
ataggcagacatgagggttatcactttctggacaatggctcatgacacgg
tgacctgaatgtcattatattatactgtcacctcagaggaaggctaccct
tagggtactttccgtttagaaaattgaaaagattataaaaggagggataa
taactcatgttctgatatgagctcactggagtttgaggtcaactatgcaa
gttttttaagggatcaactaatggtaattggtgttaagaagaactggggt
aatttatgaccctaacactgaaagagactaaaaggtttacagcatgcagg
cccgggaattcatgggtggaaagtccaggtggaatctgcctccaatccgg
attcatctaaggca
gaattctgaactcatctgtcataaaatcactggcacacagctggcaactg
gaaaaaggatacttttaacctcaactggcataaacgtgtgtatttatttt
taagaagtgaagtataaacagacattcggagagccaagtgttttatgaag
aaaaaagactttgcacacacacatacacacagagagacacagacacacag
agacacagaaacacacacacacagacacacacacatctcccaaggggcca
ggaggatttctgtggatgtgaattctactcactgttagtattaaggaagt
ggtggctttttaacaagttactcatgcctggaaaatagcccagctttgca
agttatccaggattctttgccaactgtccgtgggaatcattgggatggga
aaagttcaaatttgttttaaaagaactagctcaatggaaaatttgaagaa
gaagaagaaaaaaaaaaaactgtagaagacaccaaccactcactctgctt
gtcttcccgttaagtaagggaaaagtttaggcagagttgctttatttttc
tttggcataattttaagaaatggtaggcttttatttctactacccaagga
tagcctttgattaaactgaggttgtcaataaagggatagaggaccctcag
tcaatgccataagccaggtgatctggtctagctgccaatcttccttcttg
tccttagtacattttttgctgtcagtttctaaaccacaaatggtgaaagg
agccacaatcggaaagtgatccaatccatcaacaccagtgcaatatcacc
ttttctataatctattggactgttcggcaaagcacgagggcagtagtttt
caaccttcttaatactgtggccctttaatagagttcctcatgttctagtc
accccagccataattatttcatgctccttctaactgtattttgccgctgt
atgaatcataatgtaaatatatgatatgcaggtattgatatgtgacttct
gtgaaagggtcatcgtccctaagaaagaggtcttgatgacagttgagaac
actactctcaggctcctctgcttatttattggcgagcaagacattaagtc
acatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_78116553_78117514
seq2: B6Ng01-124D07.b_48_1010

seq1  GAATTCCAACATTTGGGCATCCTTCCGAGGGTAGCCAAGGAAGGGTGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAACATTTGGGCATCCTTCCGAGGGTAGCCAAGGAAGGGTGGAG  50

seq1  GGAGAGAAATGGGCAGGGTTGAGTGTGAATGGCCTGGCTTGTTGGGAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAAATGGGCAGGGTTGAGTGTGAATGGCCTGGCTTGTTGGGAGCC  100

seq1  TGGGGCAGCGGGTGTAATGGTATGCGAAGTGACCCTGCGCATAGGCACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCAGCGGGTGTAATGGTATGCGAAGTGACCCTGCGCATAGGCACTG  150

seq1  TGGGTAGCCCCAGCTTTTTTGTAAAAGAAGCATTTGCAGTGGAGGTTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAGCCCCAGCTTTTTTGTAAAAGAAGCATTTGCAGTGGAGGTTTGG  200

seq1  GTTTCAGGCCTCCCAGTCATCAATCATCACAGCCCATTCTTCTCTTTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGGCCTCCCAGTCATCAATCATCACAGCCCATTCTTCTCTTTGAC  250

seq1  AGCTCAGTACAAGGCCTGACATTTGACACCCAAGACCCCGGACTTATGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAGTACAAGGCCTGACATTTGACACCCAAGACCCCGGACTTATGTG  300

seq1  CAGACACAAGCTGAGGCCCTAAGGGAGGGAAAGGGGGGGGGGCAAGAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACAAGCTGAGGCCCTAAGGGAGGGAAAGGGGGGGGGGCAAGAGAA  350

seq1  AAGCTAAGCTGATTTTTTTTTTTTAGATGCTGCAAACAGAGGAAGATACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAAGCTGATTTTTTTTTTTTAGATGCTGCAAACAGAGGAAGATACC  400

seq1  AAACAAATTGTGACAGCCACAGGAAATGATTCTACAGGAGAGACAGCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAATTGTGACAGCCACAGGAAATGATTCTACAGGAGAGACAGCATC  450

seq1  ACAGTGAGTTCTGTCCTCTACTTTAGGATGTTTTTGTATCTTCAGGATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGAGTTCTGTCCTCTACTTTAGGATGTTTTTGTATCTTCAGGATGC  500

seq1  TTTAAATAGCTCTGAGTGGACCCTTTGTAGCACATATCTGATCCTGGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATAGCTCTGAGTGGACCCTTTGTAGCACATATCTGATCCTGGCTG  550

seq1  GCCACTTTCCATTTGGCCCGATAGAATCCAACCTCAGCATTCACAAATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTTTCCATTTGGCCCGATAGAATCCAACCTCAGCATTCACAAATGG  600

seq1  ATAGGCAGACATGAGGGTTATCACTTTCTGGACAATGGCTCATGACACGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCAGACATGAGGGTTATCACTTTCTGGACAATGGCTCATGACACGG  650

seq1  TGACCTGAATGTCATTATATTATACTGTCACCTCAGAGGAAGGCTACCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTGAATGTCATTATATTATACTGTCACCTCAGAGGAAGGCTACCCT  700

seq1  TAGGGTACTTTCCGTTTAGAAAATTGAAAAGATTATAAAAAGGAGGGATA  750
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TAGGGTACTTTCCGTTTAGAAAATTGAAAAGATTAT-AAAAGGAGGGATA  749

seq1  ATAACTCAGGTTCTGATATGAGCTCACTGGAGTTTGAGGTCAACTAATGC  800
      |||||||| |||||||||||||||||||||||||||||||||||| ||||
seq2  ATAACTCATGTTCTGATATGAGCTCACTGGAGTTTGAGGTCAACT-ATGC  798

seq1  AAGTGTTTT-AGGGATCAACTAATGGTAATTGGTGTTAAGAAGAACT-GG  848
      |||| |||| ||||||||||||||||||||||||||||||||||||| ||
seq2  AAGTTTTTTAAGGGATCAACTAATGGTAATTGGTGTTAAGAAGAACTGGG  848

seq1  GTAATTTATGACCCTAACACTGAAAGAGACTAAAAGGTTTACAGCATGCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GTAATTTATGACCCTAACACTGAAAGAGACTAAAAGGTTTACAGCATGC-  897

seq1  AGGCCCGGGATTTCATGGGT-GAAAGTCCAGGT-GATTCTGCCTCGAATC  946
      |||||||||| ||||||||| |||||||||||| || |||||||| ||||
seq2  AGGCCCGGGAATTCATGGGTGGAAAGTCCAGGTGGAATCTGCCTCCAATC  947

seq1  TGTATTCATCTAAGGC  962
       | |||||||||||||
seq2  CGGATTCATCTAAGGC  963

seq1: chr7_78236542_78237668
seq2: B6Ng01-124D07.g_70_1174 (reverse)

seq1  AATGTTGACTTATAGTCTTGCTACAGCACAAATAAAATATAAGCAAGAGG  50
      |||| |||||||  ||||||||    | | |||||   |||||| |||||
seq2  AATG-TGACTTAATGTCTTGCT----CGCCAATAA---ATAAGC-AGAGG  41

seq1  AAAGCCCTGAGAGTAGTGGTTCTCAACCTGTCATCAAGACCTCTCTCTTT  100
      |    |||||||||||| |||||||| ||||||||||||||||| || ||
seq2  A---GCCTGAGAGTAGT-GTTCTCAA-CTGTCATCAAGACCTCTTTC-TT  85

seq1  GGGGACGGAATGACCCTTTCACAGAAGTCACATATCAAATACCTGCATAT  150
       ||||||  ||||||||||||||||||||||||||| |||||||||||||
seq2  AGGGACG--ATGACCCTTTCACAGAAGTCACATATC-AATACCTGCATAT  132

seq1  CATATATTTACATTATGATTCATAACAGCGGCAAAATTACAGTTAAGAAG  200
      ||||||||||||||||||||||| |||||||||||| ||||||| |||||
seq2  CATATATTTACATTATGATTCAT-ACAGCGGCAAAA-TACAGTT-AGAAG  179

seq1  GAGCAATGAAATAATTTTATGGCTGGGGTGACTAGAACATGAGGAACTCT  250
      |||| |||||||||  ||||||||||||||||||||||||||||||||||
seq2  GAGC-ATGAAATAA--TTATGGCTGGGGTGACTAGAACATGAGGAACTCT  226

seq1  ATTAAAGGGCCACAGTATTAAGAAGGTTGAAAACTACTGCCCTCGTGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGGGCCACAGTATTAAGAAGGTTGAAAACTACTGCCCTCGTGCTT  276

seq1  TGCCGAACAGTCC-ATAGATTATAGAAAAGGTGATATTGCACTGGTGTTG  349
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGCCGAACAGTCCAATAGATTATAGAAAAGGTGATATTGCACTGGTGTTG  326

seq1  ATGGATTGGATCAC-TTCCGATTGTGGCTCCTTTCACCATTTGTGGTTTA  398
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATGGATTGGATCACTTTCCGATTGTGGCTCCTTTCACCATTTGTGGTTTA  376

seq1  GAAACTGACAGCAAAAAATGTACTAAGGACAAGAAGGAAGATTGGCAGCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGACAGCAAAAAATGTACTAAGGACAAGAAGGAAGATTGGCAGCT  426

seq1  AGACCAGATCACCTGGCTTATGGCATTGACTGAGGGTCCTCTATCCCTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGATCACCTGGCTTATGGCATTGACTGAGGGTCCTCTATCCCTTT  476

seq1  ATTGACAACCTCAGTTTAATCAAAGGCTATCCTTGGGTAGTAGAAATAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACAACCTCAGTTTAATCAAAGGCTATCCTTGGGTAGTAGAAATAAA  526

seq1  AGCCTACCATTTCTTAAAATTATGCCAAAGAAAAATAAAGCAACTCTGCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTACCATTTCTTAAAATTATGCCAAAGAAAAATAAAGCAACTCTGCC  576

seq1  TAAACTTTTCCCTTACTTAACGGGAAGACAAGCAGAGTGAGTGGTTGGTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTTTCCCTTACTTAACGGGAAGACAAGCAGAGTGAGTGGTTGGTG  626

seq1  TCTTCTACAGTTTTTTTTTTTTCTTCTTCTTCTTCAAATTTTCCATTGAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTACAGTTTTTTTTTTTTCTTCTTCTTCTTCAAATTTTCCATTGAG  676

seq1  CTAGTTCTTTTAAAACAAATTTGAACTTTTCCCATCCCAATGATTCCCAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTCTTTTAAAACAAATTTGAACTTTTCCCATCCCAATGATTCCCAC  726

seq1  GGACAGTTGGCAAAGAATCCTGGATAACTTGCAAAGCTGGGCTATTTTCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGTTGGCAAAGAATCCTGGATAACTTGCAAAGCTGGGCTATTTTCC  776

seq1  AGGCATGAGTAACTTGTTAAAAAGCCACCACTTCCTTAATACTAACAGTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGAGTAACTTGTTAAAAAGCCACCACTTCCTTAATACTAACAGTG  826

seq1  AGTAGAATTCACATCCACAGAAATCCTCCTGGCCCCTTGGGAGATGTGTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAATTCACATCCACAGAAATCCTCCTGGCCCCTTGGGAGATGTGTG  876

seq1  TGTGTCTGTGTGTGTGTGTTTCTGTGTCTCTGTGTGTCTGTGTCTCTCTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTGTGTGTGTGTGTTTCTGTGTCTCTGTGTGTCTGTGTCTCTCTG  926

seq1  TGTGTATGTGTGTGTGCAAAGTCTTTTTTCTTCATAAAACACTTGGCTCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGTGTGTGTGCAAAGTCTTTTTTCTTCATAAAACACTTGGCTCT  976

seq1  CCGAATGTCTGTTTATACTTCACTTCTTAAAAATAAATACACACGTTTAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAATGTCTGTTTATACTTCACTTCTTAAAAATAAATACACACGTTTAT  1026

seq1  GCCAGTTGAGGTTAAAAGTATCCTTTTTCCAGTTGCCAGCTGTGTGCCAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTTGAGGTTAAAAGTATCCTTTTTCCAGTTGCCAGCTGTGTGCCAG  1076

seq1  TGATTTTATGACAGATGAGTTCAGAATTC  1127
      |||||||||||||||||||||||||||||
seq2  TGATTTTATGACAGATGAGTTCAGAATTC  1105